RNA–Protein interactions for RNA: ENST00000539552.1

AC055720.1-201, humanhuman

TSL 5 BASIC

Gene AC055720.1, Length 475 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055720.1-201ENST00000539552 DUSP3P51452 185 aaPredicted RBP3.37□□□□□ -1.87
AC055720.1-201ENST00000539552 NOVA1P51513 510 aaKnown RBP3.37□□□□□ -1.87
AC055720.1-201ENST00000539552 PSMD4P55036 377 aaKnown RBP3.37□□□□□ -1.87
AC055720.1-201ENST00000539552 RAB10P61026 200 aa3.37□□□□□ -1.87
AC055720.1-201ENST00000539552 OSTNP61366 133 aa3.37□□□□□ -1.87
AC055720.1-201ENST00000539552 POLR2GP62487 172 aaKnown RBP eCLIP3.37□□□□□ -1.87
AC055720.1-201ENST00000539552 ID2Q02363 134 aa3.37□□□□□ -1.87
AC055720.1-201ENST00000539552 SRYQ05066 204 aa3.37□□□□□ -1.87
AC055720.1-201ENST00000539552 MFGE8Q08431 387 aaPredicted RBP3.37□□□□□ -1.87
AC055720.1-201ENST00000539552 C1orf61Q13536 156 aa3.37□□□□□ -1.87
AC055720.1-201ENST00000539552 CEACAM7Q14002 265 aa3.37□□□□□ -1.87
AC055720.1-201ENST00000539552 KYAT1Q16773 422 aa3.37□□□□□ -1.87
AC055720.1-201ENST00000539552 ZNF699Q32M78 642 aa3.37□□□□□ -1.87
AC055720.1-201ENST00000539552 FAM69BQ5VUD6 431 aa3.37□□□□□ -1.87
AC055720.1-201ENST00000539552 TIGD3Q6B0B8 471 aa3.37□□□□□ -1.87
AC055720.1-201ENST00000539552 DMKNQ6E0U4 476 aaPredicted RBP3.37□□□□□ -1.87
AC055720.1-201ENST00000539552 UQCC3Q6UW78 93 aa3.37□□□□□ -1.87
AC055720.1-201ENST00000539552 FAM151BQ6UXP7 276 aa3.37□□□□□ -1.87
AC055720.1-201ENST00000539552 PLEKHG7Q6ZR37 379 aa3.37□□□□□ -1.87
AC055720.1-201ENST00000539552 PID1Q7Z2X4 250 aa3.37□□□□□ -1.87
AC055720.1-201ENST00000539552 COX8CQ7Z4L0 72 aa3.37□□□□□ -1.87
AC055720.1-201ENST00000539552 ANKRD37Q7Z713 158 aa3.37□□□□□ -1.87
AC055720.1-201ENST00000539552 MOB3BQ86TA1 216 aa3.37□□□□□ -1.87
AC055720.1-201ENST00000539552 ACOT1Q86TX2 421 aa3.37□□□□□ -1.87
AC055720.1-201ENST00000539552 TMEM17Q86X19 198 aa3.37□□□□□ -1.87
AC055720.1-201ENST00000539552 SFR1Q86XK3 245 aa3.37□□□□□ -1.87
AC055720.1-201ENST00000539552 RNF130Q86XS8 419 aa3.37□□□□□ -1.87
AC055720.1-201ENST00000539552 DCUN1D3Q8IWE4 304 aa3.37□□□□□ -1.87
AC055720.1-201ENST00000539552 CMTM8Q8IZV2 173 aa3.37□□□□□ -1.87
AC055720.1-201ENST00000539552 PARP8Q8N3A8 854 aa3.37□□□□□ -1.87
AC055720.1-201ENST00000539552 POC1AQ8NBT0 407 aa3.37□□□□□ -1.87
AC055720.1-201ENST00000539552 OR13J1Q8NGT2 312 aa3.37□□□□□ -1.87
AC055720.1-201ENST00000539552 FGFBP3Q8TAT2 258 aa3.37□□□□□ -1.87
AC055720.1-201ENST00000539552 ENKURQ8TC29 256 aa3.37□□□□□ -1.87
AC055720.1-201ENST00000539552 GTF2H4Q92759 462 aa3.37□□□□□ -1.87
AC055720.1-201ENST00000539552 CPB2Q96IY4 423 aa3.37□□□□□ -1.87
AC055720.1-201ENST00000539552 FAM84BQ96KN1 310 aaPredicted RBP3.37□□□□□ -1.87
AC055720.1-201ENST00000539552 C12orf42Q96LP6 360 aa3.37□□□□□ -1.87
AC055720.1-201ENST00000539552 C3orf30Q96M34 536 aa3.37□□□□□ -1.87
AC055720.1-201ENST00000539552 TIMP4Q99727 224 aa3.37□□□□□ -1.87
AC055720.1-201ENST00000539552 NAPGQ99747 312 aaPredicted RBP3.37□□□□□ -1.87
AC055720.1-201ENST00000539552 SH2D3AQ9BRG2 576 aa3.37□□□□□ -1.87
AC055720.1-201ENST00000539552 SYT11Q9BT88 431 aa3.37□□□□□ -1.87
AC055720.1-201ENST00000539552 LRRC1Q9BTT6 524 aa3.37□□□□□ -1.87
AC055720.1-201ENST00000539552 DERL2Q9GZP9 239 aa3.37□□□□□ -1.87
AC055720.1-201ENST00000539552 ARRDC1-AS1Q9H2J1 176 aa3.37□□□□□ -1.87
AC055720.1-201ENST00000539552 CENPHQ9H3R5 247 aa3.37□□□□□ -1.87
AC055720.1-201ENST00000539552 DPEP2Q9H4A9 486 aa3.37□□□□□ -1.87
AC055720.1-201ENST00000539552 KLHL31Q9H511 634 aa3.37□□□□□ -1.87
AC055720.1-201ENST00000539552 VIPAS39Q9H9C1 493 aa3.37□□□□□ -1.87
AC055720.1-201ENST00000539552 SLC38A10Q9HBR0 1119 aa3.37□□□□□ -1.87
AC055720.1-201ENST00000539552 CD209Q9NNX6 404 aa3.37□□□□□ -1.87
AC055720.1-201ENST00000539552 MLXIPLQ9NP71 852 aa3.37□□□□□ -1.87
AC055720.1-201ENST00000539552 THSD1Q9NS62 852 aa3.37□□□□□ -1.87
AC055720.1-201ENST00000539552 TREX1Q9NSU2 369 aa3.37□□□□□ -1.87
AC055720.1-201ENST00000539552 STARD5Q9NSY2 213 aa3.37□□□□□ -1.87
AC055720.1-201ENST00000539552 ASIC3Q9UHC3 531 aa3.37□□□□□ -1.87
AC055720.1-201ENST00000539552 PRPF19Q9UMS4 504 aaKnown RBP3.37□□□□□ -1.87
AC055720.1-201ENST00000539552 NPIPA1Q9UND3 350 aa3.37□□□□□ -1.87
AC055720.1-201ENST00000539552 CFL2Q9Y281 166 aa3.37□□□□□ -1.87
AC055720.1-201ENST00000539552 YIPF1Q9Y548 306 aa3.37□□□□□ -1.87
AC055720.1-201ENST00000539552 OR1A2Q9Y585 309 aa3.37□□□□□ -1.87
AC055720.1-201ENST00000539552 PCDHGB1Q9Y5G3 927 aa3.37□□□□□ -1.87
AC055720.1-201ENST00000539552 PEX16Q9Y5Y5 336 aa3.37□□□□□ -1.87
AC055720.1-201ENST00000539552 PHIPQ8WWQ0 1821 aa3.37□□□□□ -1.87
AC055720.1-201ENST00000539552 RLFQ13129 1914 aa3.36□□□□□ -1.87
AC055720.1-201ENST00000539552 AK9Q5TCS8 1911 aa3.36□□□□□ -1.87
AC055720.1-201ENST00000539552 CSMD2Q7Z408 3487 aa3.36□□□□□ -1.87
AC055720.1-201ENST00000539552 C2CD4DB7Z1M9 353 aa3.36□□□□□ -1.87
AC055720.1-201ENST00000539552 E7ESA3 106 aa3.36□□□□□ -1.87
AC055720.1-201ENST00000539552 E9PQ18 207 aa3.36□□□□□ -1.87
AC055720.1-201ENST00000539552 RNASEK-C17orf49H0YIS7 233 aa3.36□□□□□ -1.87
AC055720.1-201ENST00000539552 GAPDHSO14556 408 aaPredicted RBP3.36□□□□□ -1.87
AC055720.1-201ENST00000539552 CYB561D2O14569 222 aa3.36□□□□□ -1.87
AC055720.1-201ENST00000539552 PRKAB2O43741 272 aa3.36□□□□□ -1.87
AC055720.1-201ENST00000539552 RPP14O95059 124 aaKnown RBP3.36□□□□□ -1.87
AC055720.1-201ENST00000539552 VAPBO95292 243 aa3.36□□□□□ -1.87
AC055720.1-201ENST00000539552 FADS2O95864 444 aaKnown RBP3.36□□□□□ -1.87
AC055720.1-201ENST00000539552 CST4P01036 141 aa3.36□□□□□ -1.87
AC055720.1-201ENST00000539552 GAPDHP04406 335 aaKnown RBP3.36□□□□□ -1.87
AC055720.1-201ENST00000539552 RPN2P04844 631 aa3.36□□□□□ -1.87
AC055720.1-201ENST00000539552 SERPINB2P05120 415 aa3.36□□□□□ -1.87
AC055720.1-201ENST00000539552 SERPINA6P08185 405 aa3.36□□□□□ -1.87
AC055720.1-201ENST00000539552 OCMP0CE72 109 aaPredicted RBP3.36□□□□□ -1.87
AC055720.1-201ENST00000539552 PRF1P14222 555 aa3.36□□□□□ -1.87
AC055720.1-201ENST00000539552 IL9P15248 144 aa3.36□□□□□ -1.87
AC055720.1-201ENST00000539552 CHRNB2P17787 502 aa3.36□□□□□ -1.87
AC055720.1-201ENST00000539552 CD1CP29017 333 aa3.36□□□□□ -1.87
AC055720.1-201ENST00000539552 CFHR2P36980 270 aa3.36□□□□□ -1.87
AC055720.1-201ENST00000539552 PITX1P78337 314 aaPredicted RBP3.36□□□□□ -1.87
AC055720.1-201ENST00000539552 CX3CL1P78423 397 aa3.36□□□□□ -1.87
AC055720.1-201ENST00000539552 LCN2P80188 198 aa3.36□□□□□ -1.87
AC055720.1-201ENST00000539552 MRPS6P82932 125 aaKnown RBP3.36□□□□□ -1.87
AC055720.1-201ENST00000539552 EWSR1Q01844 656 aaKnown RBP eCLIP3.36□□□□□ -1.87
AC055720.1-201ENST00000539552 ZNF91Q05481 1191 aa3.36□□□□□ -1.87
AC055720.1-201ENST00000539552 FHL1Q13642 323 aa3.36□□□□□ -1.87
AC055720.1-201ENST00000539552 MRPL23Q16540 153 aaKnown RBP3.36□□□□□ -1.87
AC055720.1-201ENST00000539552 SLC5A12Q1EHB4 618 aa3.36□□□□□ -1.87
AC055720.1-201ENST00000539552 SNAI3Q3KNW1 292 aa3.36□□□□□ -1.87
AC055720.1-201ENST00000539552 PTPN20Q4JDL3 420 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms