RNA–Protein interactions for RNA: ENST00000539338.6

CACNB1-206, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best)

Gene CACNB1, Length 5,308 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-206ENST00000539338 SH3BGRL2Q9UJC5 107 aa13.53□□□□□ -0.24
CACNB1-206ENST00000539338 CENPBD1B2RD01 187 aa13.53□□□□□ -0.24
CACNB1-206ENST00000539338 IFNA5P01569 189 aa13.53□□□□□ -0.24
CACNB1-206ENST00000539338 ELAVL4P26378 380 aaKnown RBP13.53□□□□□ -0.24
CACNB1-206ENST00000539338 SLC1A3P43003 542 aa13.53□□□□□ -0.24
CACNB1-206ENST00000539338 ALDH3B2P48448 385 aa13.53□□□□□ -0.24
CACNB1-206ENST00000539338 HNRNPFP52597 415 aaKnown RBP13.53□□□□□ -0.24
CACNB1-206ENST00000539338 NFATC4Q14934 902 aa13.53□□□□□ -0.24
CACNB1-206ENST00000539338 PPA1Q15181 289 aa13.53□□□□□ -0.24
CACNB1-206ENST00000539338 POU4F3Q15319 338 aa13.53□□□□□ -0.24
CACNB1-206ENST00000539338 SLC46A3Q7Z3Q1 461 aa13.53□□□□□ -0.24
CACNB1-206ENST00000539338 SNAPC3Q92966 411 aa13.53□□□□□ -0.24
CACNB1-206ENST00000539338 AMBRA1Q9C0C7 1298 aa13.53□□□□□ -0.24
CACNB1-206ENST00000539338 RANGRFQ9HD47 186 aaPredicted RBP13.53□□□□□ -0.24
CACNB1-206ENST00000539338 TNFRSF12AQ9NP84 129 aa13.53□□□□□ -0.24
CACNB1-206ENST00000539338 PRSS16Q9NQE7 514 aa13.53□□□□□ -0.24
CACNB1-206ENST00000539338 RLIMQ9NVW2 624 aa13.53□□□□□ -0.24
CACNB1-206ENST00000539338 NXT1Q9UKK6 140 aaKnown RBP13.53□□□□□ -0.24
CACNB1-206ENST00000539338 PPT2Q9UMR5 302 aa13.53□□□□□ -0.24
CACNB1-206ENST00000539338 YBX2Q9Y2T7 364 aaKnown RBP13.53□□□□□ -0.24
CACNB1-206ENST00000539338 ASB1Q9Y576 335 aa13.53□□□□□ -0.24
CACNB1-206ENST00000539338 LCATP04180 440 aa13.53□□□□□ -0.24
CACNB1-206ENST00000539338 AKAIN1P0CW23 69 aa13.53□□□□□ -0.24
CACNB1-206ENST00000539338 EVI2BP34910 448 aa13.53□□□□□ -0.24
CACNB1-206ENST00000539338 HOXD12P35452 270 aa13.53□□□□□ -0.24
CACNB1-206ENST00000539338 FASLGP48023 281 aa13.53□□□□□ -0.24
CACNB1-206ENST00000539338 ADARB1P78563 741 aaKnown RBP13.53□□□□□ -0.24
CACNB1-206ENST00000539338 LMF2Q9BU23 707 aaKnown RBP13.53□□□□□ -0.24
CACNB1-206ENST00000539338 ASF1BQ9NVP2 202 aa13.53□□□□□ -0.24
CACNB1-206ENST00000539338 TAAR2Q9P1P5 351 aa13.53□□□□□ -0.24
CACNB1-206ENST00000539338 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.52□□□□□ -0.24
CACNB1-206ENST00000539338 SLC16A6O15403 523 aa13.52□□□□□ -0.24
CACNB1-206ENST00000539338 OR2T1O43869 369 aa13.52□□□□□ -0.24
CACNB1-206ENST00000539338 SEC14L2O76054 403 aa13.52□□□□□ -0.24
CACNB1-206ENST00000539338 IFNA2P01563 188 aa13.52□□□□□ -0.24
CACNB1-206ENST00000539338 DAP3P51398 398 aaKnown RBP13.52□□□□□ -0.24
CACNB1-206ENST00000539338 KCNJ8Q15842 424 aa13.52□□□□□ -0.24
CACNB1-206ENST00000539338 FAM69AQ5T7M9 428 aa13.52□□□□□ -0.24
CACNB1-206ENST00000539338 FAM160A2Q8N612 972 aaPredicted RBP13.52□□□□□ -0.24
CACNB1-206ENST00000539338 SIMC1Q8NDZ2 872 aa13.52□□□□□ -0.24
CACNB1-206ENST00000539338 DCUN1D4Q92564 292 aa13.52□□□□□ -0.24
CACNB1-206ENST00000539338 GLIPR2Q9H4G4 154 aa13.52□□□□□ -0.24
CACNB1-206ENST00000539338 ZNF160Q9HCG1 818 aa13.52□□□□□ -0.24
CACNB1-206ENST00000539338 VSX1Q9NZR4 365 aaPredicted RBP13.52□□□□□ -0.24
CACNB1-206ENST00000539338 GLS2Q9UI32 602 aa13.52□□□□□ -0.24
CACNB1-206ENST00000539338 POLHQ9Y253 713 aa13.52□□□□□ -0.24
CACNB1-206ENST00000539338 PTPRZ1P23471 2315 aaPredicted RBP13.52□□□□□ -0.24
CACNB1-206ENST00000539338 NPPBP16860 134 aa13.52□□□□□ -0.24
CACNB1-206ENST00000539338 GPX2P18283 190 aa13.52□□□□□ -0.24
CACNB1-206ENST00000539338 HLA-DMAP28067 261 aa13.52□□□□□ -0.24
CACNB1-206ENST00000539338 GABRA5P31644 462 aa13.52□□□□□ -0.24
CACNB1-206ENST00000539338 TNFRSF17Q02223 184 aa13.52□□□□□ -0.24
CACNB1-206ENST00000539338 SPOCK1Q08629 439 aa13.52□□□□□ -0.24
CACNB1-206ENST00000539338 OR7E24Q6IFN5 339 aa13.52□□□□□ -0.24
CACNB1-206ENST00000539338 BOLLQ8N9W6 283 aaKnown RBP13.52□□□□□ -0.24
CACNB1-206ENST00000539338 TMEM178AQ8NBL3 297 aa13.52□□□□□ -0.24
CACNB1-206ENST00000539338 CHPT1Q8WUD6 406 aa13.52□□□□□ -0.24
CACNB1-206ENST00000539338 NOX3Q9HBY0 568 aa13.52□□□□□ -0.24
CACNB1-206ENST00000539338 APMAPQ9HDC9 416 aa13.52□□□□□ -0.24
CACNB1-206ENST00000539338 INPP5EQ9NRR6 644 aa13.52□□□□□ -0.24
CACNB1-206ENST00000539338 RCE1Q9Y256 329 aa13.52□□□□□ -0.24
CACNB1-206ENST00000539338 A6NIZ1 184 aa13.52□□□□□ -0.25
CACNB1-206ENST00000539338 KLK10O43240 276 aa13.52□□□□□ -0.25
CACNB1-206ENST00000539338 SLCO2B1O94956 709 aa13.52□□□□□ -0.25
CACNB1-206ENST00000539338 B3GALT4O96024 378 aa13.52□□□□□ -0.25
CACNB1-206ENST00000539338 SNRPBP14678 240 aaKnown RBP13.52□□□□□ -0.25
CACNB1-206ENST00000539338 RAB3AP20336 220 aa13.52□□□□□ -0.25
CACNB1-206ENST00000539338 LIPAP38571 399 aa13.52□□□□□ -0.25
CACNB1-206ENST00000539338 OR1D4P47884 311 aa13.52□□□□□ -0.25
CACNB1-206ENST00000539338 EMP2P54851 167 aa13.52□□□□□ -0.25
CACNB1-206ENST00000539338 RAP1BP61224 184 aa13.52□□□□□ -0.25
CACNB1-206ENST00000539338 RAP1AP62834 184 aa13.52□□□□□ -0.25
CACNB1-206ENST00000539338 FCRLAQ7L513 359 aa13.52□□□□□ -0.25
CACNB1-206ENST00000539338 ZNF587Q96SQ5 575 aaPredicted RBP13.52□□□□□ -0.25
CACNB1-206ENST00000539338 TESQ9UGI8 421 aaKnown RBP13.52□□□□□ -0.25
CACNB1-206ENST00000539338 RHBDD3Q9Y3P4 386 aa13.52□□□□□ -0.25
CACNB1-206ENST00000539338 LSM5Q9Y4Y9 91 aaKnown RBP13.52□□□□□ -0.25
CACNB1-206ENST00000539338 MTCH2Q9Y6C9 303 aa13.52□□□□□ -0.25
CACNB1-206ENST00000539338 ZNF195O14628 629 aa13.52□□□□□ -0.25
CACNB1-206ENST00000539338 PRAF2O60831 178 aa13.52□□□□□ -0.25
CACNB1-206ENST00000539338 SCG5P05408 212 aa13.52□□□□□ -0.25
CACNB1-206ENST00000539338 WBP2NLQ6ICG8 309 aa13.52□□□□□ -0.25
CACNB1-206ENST00000539338 ADAMTS14Q8WXS8 1223 aa13.52□□□□□ -0.25
CACNB1-206ENST00000539338 USB1Q9BQ65 265 aaKnown RBP13.52□□□□□ -0.25
CACNB1-206ENST00000539338 MFFQ9GZY8 342 aa13.52□□□□□ -0.25
CACNB1-206ENST00000539338 TXNL4BQ9NX01 149 aaKnown RBP13.52□□□□□ -0.25
CACNB1-206ENST00000539338 PADI1Q9ULC6 663 aa13.52□□□□□ -0.25
CACNB1-206ENST00000539338 SNX11Q9Y5W9 270 aa13.52□□□□□ -0.25
CACNB1-206ENST00000539338 ACOD1A6NK06 481 aa13.51□□□□□ -0.25
CACNB1-206ENST00000539338 KDM4EB2RXH2 506 aaPredicted RBP13.51□□□□□ -0.25
CACNB1-206ENST00000539338 ARRB2P32121 409 aa13.51□□□□□ -0.25
CACNB1-206ENST00000539338 THBS2P35442 1172 aa13.51□□□□□ -0.25
CACNB1-206ENST00000539338 CAMLGP49069 296 aa13.51□□□□□ -0.25
CACNB1-206ENST00000539338 ADPRMQ3LIE5 342 aa13.51□□□□□ -0.25
CACNB1-206ENST00000539338 ARL5BQ96KC2 179 aa13.51□□□□□ -0.25
CACNB1-206ENST00000539338 TNFRSF13CQ96RJ3 184 aa13.51□□□□□ -0.25
CACNB1-206ENST00000539338 ZNF649Q9BS31 505 aa13.51□□□□□ -0.25
CACNB1-206ENST00000539338 H7C1C5 153 aa13.51□□□□□ -0.25
CACNB1-206ENST00000539338 CSO75390 466 aaKnown RBP13.51□□□□□ -0.25
CACNB1-206ENST00000539338 OR8G3PP0DMU2 310 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms