RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 ZNF701Q9NV72 531 aaPredicted RBP19.63■□□□□ 0.73
SCARB1-206ENST00000539320 CALML5Q9NZT1 146 aa19.63■□□□□ 0.73
SCARB1-206ENST00000539320 TMEM181Q9P2C4 612 aa19.63■□□□□ 0.73
SCARB1-206ENST00000539320 FN1P02751 2386 aaKnown RBP19.63■□□□□ 0.73
SCARB1-206ENST00000539320 PLCE1Q9P212 2302 aa19.62■□□□□ 0.73
SCARB1-206ENST00000539320 DSPPQ9NZW4 1301 aa19.62■□□□□ 0.73
SCARB1-206ENST00000539320 TMEM72A0PK05 275 aa19.62■□□□□ 0.73
SCARB1-206ENST00000539320 TRIM64A6NGJ6 449 aa19.62■□□□□ 0.73
SCARB1-206ENST00000539320 TRIM64BA6NI03 449 aa19.62■□□□□ 0.73
SCARB1-206ENST00000539320 ZNF208O43345 1280 aa19.62■□□□□ 0.73
SCARB1-206ENST00000539320 BCHEP06276 602 aa19.62■□□□□ 0.73
SCARB1-206ENST00000539320 ETFAP13804 333 aa19.62■□□□□ 0.73
SCARB1-206ENST00000539320 GGT1P19440 569 aa19.62■□□□□ 0.73
SCARB1-206ENST00000539320 TACR3P29371 465 aa19.62■□□□□ 0.73
SCARB1-206ENST00000539320 SLC1A3P43003 542 aa19.62■□□□□ 0.73
SCARB1-206ENST00000539320 CRATP43155 626 aa19.62■□□□□ 0.73
SCARB1-206ENST00000539320 DSTNP60981 165 aa19.62■□□□□ 0.73
SCARB1-206ENST00000539320 RPS4XP62701 263 aaKnown RBP19.62■□□□□ 0.73
SCARB1-206ENST00000539320 LTBQ06643 244 aa19.62■□□□□ 0.73
SCARB1-206ENST00000539320 BSPH1Q075Z2 132 aa19.62■□□□□ 0.73
SCARB1-206ENST00000539320 PPA1Q15181 289 aa19.62■□□□□ 0.73
SCARB1-206ENST00000539320 MAPK11Q15759 364 aa19.62■□□□□ 0.73
SCARB1-206ENST00000539320 GTDC1Q4AE62 458 aa19.62■□□□□ 0.73
SCARB1-206ENST00000539320 Q71RC1 249 aaPredicted RBP19.62■□□□□ 0.73
SCARB1-206ENST00000539320 SSX8Q7RTT4 187 aa19.62■□□□□ 0.73
SCARB1-206ENST00000539320 ATG4DQ86TL0 474 aaPredicted RBP19.62■□□□□ 0.73
SCARB1-206ENST00000539320 CIARTQ8N365 385 aaPredicted RBP19.62■□□□□ 0.73
SCARB1-206ENST00000539320 FBXW5Q969U6 566 aa19.62■□□□□ 0.73
SCARB1-206ENST00000539320 ITCHQ96J02 903 aa19.62■□□□□ 0.73
SCARB1-206ENST00000539320 TPT1P8Q9HAU6 139 aa19.62■□□□□ 0.73
SCARB1-206ENST00000539320 TRAPPC4Q9Y296 219 aa19.62■□□□□ 0.73
SCARB1-206ENST00000539320 NIPBLQ6KC79 2804 aaeCLIP19.61■□□□□ 0.73
SCARB1-206ENST00000539320 RAMP1O60894 148 aa19.61■□□□□ 0.73
SCARB1-206ENST00000539320 IGHV3-9P01782 118 aa19.61■□□□□ 0.73
SCARB1-206ENST00000539320 HEXAP06865 529 aa19.61■□□□□ 0.73
SCARB1-206ENST00000539320 POLR2JP52435 117 aaKnown RBP19.61■□□□□ 0.73
SCARB1-206ENST00000539320 CRISP3P54108 245 aa19.61■□□□□ 0.73
SCARB1-206ENST00000539320 ATP5J2P56134 94 aa19.61■□□□□ 0.73
SCARB1-206ENST00000539320 TIMM23BQ5SRD1 257 aa19.61■□□□□ 0.73
SCARB1-206ENST00000539320 C6orf10Q5SRN2 563 aa19.61■□□□□ 0.73
SCARB1-206ENST00000539320 FBXW9Q5XUX1 488 aa19.61■□□□□ 0.73
SCARB1-206ENST00000539320 ZNF836Q6ZNA1 936 aa19.61■□□□□ 0.73
SCARB1-206ENST00000539320 LSRQ86X29 649 aaPredicted RBP19.61■□□□□ 0.73
SCARB1-206ENST00000539320 UBE2J2Q8N2K1 259 aa19.61■□□□□ 0.73
SCARB1-206ENST00000539320 MIER2Q8N344 545 aa19.61■□□□□ 0.73
SCARB1-206ENST00000539320 ZNF433Q8N7K0 673 aaPredicted RBP19.61■□□□□ 0.73
SCARB1-206ENST00000539320 KBTBD8Q8NFY9 601 aa19.61■□□□□ 0.73
SCARB1-206ENST00000539320 OR52P1PQ8NH57 321 aa19.61■□□□□ 0.73
SCARB1-206ENST00000539320 LILRB1Q8NHL6 650 aaPredicted RBP19.61■□□□□ 0.73
SCARB1-206ENST00000539320 MUCL1Q96DR8 90 aa19.61■□□□□ 0.73
SCARB1-206ENST00000539320 AURKBQ96GD4 344 aaPredicted RBP19.61■□□□□ 0.73
SCARB1-206ENST00000539320 LAMP3Q9UQV4 416 aa19.61■□□□□ 0.73
SCARB1-206ENST00000539320 ABCA2Q9BZC7 2435 aa19.61■□□□□ 0.73
SCARB1-206ENST00000539320 CDHR4A6H8M9 788 aa19.6■□□□□ 0.73
SCARB1-206ENST00000539320 EIF1BO60739 113 aaKnown RBP19.6■□□□□ 0.73
SCARB1-206ENST00000539320 IMPDH2P12268 514 aa19.6■□□□□ 0.73
SCARB1-206ENST00000539320 MAP2K6P52564 334 aa19.6■□□□□ 0.73
SCARB1-206ENST00000539320 SLC35A1P78382 337 aa19.6■□□□□ 0.73
SCARB1-206ENST00000539320 ZNF672Q499Z4 452 aaPredicted RBP19.6■□□□□ 0.73
SCARB1-206ENST00000539320 RNF220Q5VTB9 566 aa19.6■□□□□ 0.73
SCARB1-206ENST00000539320 P2RY8Q86VZ1 359 aa19.6■□□□□ 0.73
SCARB1-206ENST00000539320 VRK2Q86Y07 508 aa19.6■□□□□ 0.73
SCARB1-206ENST00000539320 CCDC103Q8IW40 242 aa19.6■□□□□ 0.73
SCARB1-206ENST00000539320 NEUROG1Q92886 237 aa19.6■□□□□ 0.73
SCARB1-206ENST00000539320 VPS33AQ96AX1 596 aa19.6■□□□□ 0.73
SCARB1-206ENST00000539320 RLIMQ9NVW2 624 aa19.6■□□□□ 0.73
SCARB1-206ENST00000539320 MALT1Q9UDY8 824 aa19.6■□□□□ 0.73
SCARB1-206ENST00000539320 ZNF443Q9Y2A4 671 aaPredicted RBP19.6■□□□□ 0.73
SCARB1-206ENST00000539320 USH1CQ9Y6N9 552 aa19.6■□□□□ 0.73
SCARB1-206ENST00000539320 HIVEP2P31629 2446 aa19.59■□□□□ 0.73
SCARB1-206ENST00000539320 ZC3H12DA2A288 527 aaKnown RBP19.59■□□□□ 0.73
SCARB1-206ENST00000539320 FAM234BA2RU67 622 aa19.59■□□□□ 0.73
SCARB1-206ENST00000539320 DPRXA6NFQ7 191 aa19.59■□□□□ 0.73
SCARB1-206ENST00000539320 OR5H1A6NKK0 313 aa19.59■□□□□ 0.73
SCARB1-206ENST00000539320 SMAD7O15105 426 aaKnown RBP19.59■□□□□ 0.73
SCARB1-206ENST00000539320 RAD51DO75771 328 aa19.59■□□□□ 0.73
SCARB1-206ENST00000539320 PGM3O95394 542 aa19.59■□□□□ 0.73
SCARB1-206ENST00000539320 H3F3AP84243 136 aa19.59■□□□□ 0.73
SCARB1-206ENST00000539320 RPS26P11Q5JNZ5 115 aaPredicted RBP19.59■□□□□ 0.73
SCARB1-206ENST00000539320 AGBL2Q5U5Z8 902 aa19.59■□□□□ 0.73
SCARB1-206ENST00000539320 CASP12Q6UXS9 341 aa19.59■□□□□ 0.73
SCARB1-206ENST00000539320 SLC38A5Q8WUX1 472 aa19.59■□□□□ 0.73
SCARB1-206ENST00000539320 TMEM19Q96HH6 336 aa19.59■□□□□ 0.73
SCARB1-206ENST00000539320 NAA11Q9BSU3 229 aaPredicted RBP19.59■□□□□ 0.73
SCARB1-206ENST00000539320 CACYBPQ9HB71 228 aaKnown RBP19.59■□□□□ 0.73
SCARB1-206ENST00000539320 THUMPD1Q9NXG2 353 aaKnown RBP19.59■□□□□ 0.73
SCARB1-206ENST00000539320 NPAP1Q9NZP6 1156 aa19.59■□□□□ 0.73
SCARB1-206ENST00000539320 SLC9A8Q9Y2E8 581 aa19.59■□□□□ 0.73
SCARB1-206ENST00000539320 CIB4A0PJX0 185 aa19.58■□□□□ 0.72
SCARB1-206ENST00000539320 TMEM247A6NEH6 219 aa19.58■□□□□ 0.72
SCARB1-206ENST00000539320 MRPL33O75394 65 aaKnown RBP19.58■□□□□ 0.72
SCARB1-206ENST00000539320 SOD3P08294 240 aa19.58■□□□□ 0.72
SCARB1-206ENST00000539320 TFPTP0C1Z6 253 aa19.58■□□□□ 0.72
SCARB1-206ENST00000539320 GKN3PP0CG01 181 aa19.58■□□□□ 0.72
SCARB1-206ENST00000539320 STX1BP61266 288 aa19.58■□□□□ 0.72
SCARB1-206ENST00000539320 PAQR6Q6TCH4 344 aa19.58■□□□□ 0.72
SCARB1-206ENST00000539320 EPGNQ6UW88 154 aa19.58■□□□□ 0.72
SCARB1-206ENST00000539320 C7orf26Q96N11 449 aa19.58■□□□□ 0.72
SCARB1-206ENST00000539320 TRIM2Q9C040 744 aa19.58■□□□□ 0.72
SCARB1-206ENST00000539320 ADAM19Q9H013 955 aa19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms