RNA–Protein interactions for RNA: ENST00000538786.1

ATL3-203, Transcript of atlastin GTPase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ATL3, Length 1,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-203ENST00000538786 MESP1Q9BRJ9 268 aa13.52□□□□□ -0.25
ATL3-203ENST00000538786 EXOSC4Q9NPD3 245 aaKnown RBP13.52□□□□□ -0.25
ATL3-203ENST00000538786 KLHL21Q9UJP4 597 aa13.52□□□□□ -0.25
ATL3-203ENST00000538786 SSR3Q9UNL2 185 aa13.52□□□□□ -0.25
ATL3-203ENST00000538786 FER1L5A0AVI2 2057 aa13.52□□□□□ -0.25
ATL3-203ENST00000538786 ZC3H12DA2A288 527 aaKnown RBP13.51□□□□□ -0.25
ATL3-203ENST00000538786 SP9P0CG40 484 aa13.51□□□□□ -0.25
ATL3-203ENST00000538786 TACR3P29371 465 aa13.51□□□□□ -0.25
ATL3-203ENST00000538786 EVI2BP34910 448 aa13.51□□□□□ -0.25
ATL3-203ENST00000538786 IDUAP35475 653 aa13.51□□□□□ -0.25
ATL3-203ENST00000538786 RPL4P36578 427 aaKnown RBP13.51□□□□□ -0.25
ATL3-203ENST00000538786 GRK6P43250 576 aa13.51□□□□□ -0.25
ATL3-203ENST00000538786 ZNF74Q16587 644 aa13.51□□□□□ -0.25
ATL3-203ENST00000538786 ISXQ2M1V0 245 aa13.51□□□□□ -0.25
ATL3-203ENST00000538786 LCN10Q6JVE6 187 aa13.51□□□□□ -0.25
ATL3-203ENST00000538786 MRPL14Q6P1L8 145 aaKnown RBP13.51□□□□□ -0.25
ATL3-203ENST00000538786 C16orf87Q6PH81 154 aa13.51□□□□□ -0.25
ATL3-203ENST00000538786 TMEM205Q6UW68 189 aa13.51□□□□□ -0.25
ATL3-203ENST00000538786 B3GLCTQ6Y288 498 aa13.51□□□□□ -0.25
ATL3-203ENST00000538786 OR5W2Q8NH69 310 aa13.51□□□□□ -0.25
ATL3-203ENST00000538786 GPX7Q96SL4 187 aaPredicted RBP13.51□□□□□ -0.25
ATL3-203ENST00000538786 LPAR4Q99677 370 aa13.51□□□□□ -0.25
ATL3-203ENST00000538786 KLHDC3Q9BQ90 382 aa13.51□□□□□ -0.25
ATL3-203ENST00000538786 WDR77Q9BQA1 342 aaPredicted RBP13.51□□□□□ -0.25
ATL3-203ENST00000538786 CRB3Q9BUF7 120 aa13.51□□□□□ -0.25
ATL3-203ENST00000538786 CDADC1Q9BWV3 514 aa13.51□□□□□ -0.25
ATL3-203ENST00000538786 OR51V1Q9H2C8 321 aa13.51□□□□□ -0.25
ATL3-203ENST00000538786 INPP5EQ9NRR6 644 aa13.51□□□□□ -0.25
ATL3-203ENST00000538786 HAO2Q9NYQ3 351 aa13.51□□□□□ -0.25
ATL3-203ENST00000538786 IER3IP1Q9Y5U9 82 aa13.51□□□□□ -0.25
ATL3-203ENST00000538786 NPFFR2Q9Y5X5 522 aa13.51□□□□□ -0.25
ATL3-203ENST00000538786 ARPC3O15145 178 aa13.51□□□□□ -0.25
ATL3-203ENST00000538786 IDH3BO43837 385 aa13.51□□□□□ -0.25
ATL3-203ENST00000538786 PGCP20142 388 aa13.51□□□□□ -0.25
ATL3-203ENST00000538786 ITPKBP27987 946 aa13.51□□□□□ -0.25
ATL3-203ENST00000538786 SOX6P35712 828 aa13.51□□□□□ -0.25
ATL3-203ENST00000538786 CD79BP40259 229 aa13.51□□□□□ -0.25
ATL3-203ENST00000538786 RPS7P62081 194 aaKnown RBP13.51□□□□□ -0.25
ATL3-203ENST00000538786 EGR4Q05215 589 aa13.51□□□□□ -0.25
ATL3-203ENST00000538786 EFR3AQ14156 821 aa13.51□□□□□ -0.25
ATL3-203ENST00000538786 ANKDD1AQ495B1 522 aa13.51□□□□□ -0.25
ATL3-203ENST00000538786 CPEB2Q7Z5Q1 589 aaKnown RBP13.51□□□□□ -0.25
ATL3-203ENST00000538786 MFSD4AQ8N468 514 aa13.51□□□□□ -0.25
ATL3-203ENST00000538786 CYB561A3Q8NBI2 242 aa13.51□□□□□ -0.25
ATL3-203ENST00000538786 OR52E2Q8NGJ4 325 aa13.51□□□□□ -0.25
ATL3-203ENST00000538786 OR8K3Q8NH51 312 aa13.51□□□□□ -0.25
ATL3-203ENST00000538786 WDR54Q9H977 334 aa13.51□□□□□ -0.25
ATL3-203ENST00000538786 SIAEQ9HAT2 523 aa13.51□□□□□ -0.25
ATL3-203ENST00000538786 MMP25Q9NPA2 562 aa13.51□□□□□ -0.25
ATL3-203ENST00000538786 NRIP3Q9NQ35 241 aa13.51□□□□□ -0.25
ATL3-203ENST00000538786 C19orf25Q9UFG5 118 aaPredicted RBP13.51□□□□□ -0.25
ATL3-203ENST00000538786 B3GNT3Q9Y2A9 372 aa13.51□□□□□ -0.25
ATL3-203ENST00000538786 CAB39Q9Y376 341 aaPredicted RBP13.51□□□□□ -0.25
ATL3-203ENST00000538786 ADAMTS9Q9P2N4 1935 aa13.5□□□□□ -0.25
ATL3-203ENST00000538786 C12orf71A8MTZ7 269 aa13.5□□□□□ -0.25
ATL3-203ENST00000538786 ZNF670-ZNF695F2Z2N8 137 aa13.5□□□□□ -0.25
ATL3-203ENST00000538786 AKAP8O43823 692 aaKnown RBP13.5□□□□□ -0.25
ATL3-203ENST00000538786 CDC40O60508 579 aaKnown RBP eCLIP13.5□□□□□ -0.25
ATL3-203ENST00000538786 LDOC1O95751 146 aaPredicted RBP13.5□□□□□ -0.25
ATL3-203ENST00000538786 GP1BAP07359 652 aa13.5□□□□□ -0.25
ATL3-203ENST00000538786 ZNF883P0CG24 379 aa13.5□□□□□ -0.25
ATL3-203ENST00000538786 HIST1H1CP16403 213 aaKnown RBP13.5□□□□□ -0.25
ATL3-203ENST00000538786 MPLP40238 635 aa13.5□□□□□ -0.25
ATL3-203ENST00000538786 SLC16A1P53985 500 aa13.5□□□□□ -0.25
ATL3-203ENST00000538786 POU4F2Q12837 409 aa13.5□□□□□ -0.25
ATL3-203ENST00000538786 CBFBQ13951 182 aa13.5□□□□□ -0.25
ATL3-203ENST00000538786 ZNF791Q3KP31 576 aaPredicted RBP13.5□□□□□ -0.25
ATL3-203ENST00000538786 ZNF322Q6U7Q0 402 aaPredicted RBP13.5□□□□□ -0.25
ATL3-203ENST00000538786 TMPRSS11AQ6ZMR5 421 aa13.5□□□□□ -0.25
ATL3-203ENST00000538786 IGFN1Q86VF2 1251 aa13.5□□□□□ -0.25
ATL3-203ENST00000538786 MISPQ8IVT2 679 aa13.5□□□□□ -0.25
ATL3-203ENST00000538786 C10orf53Q8N6V4 93 aa13.5□□□□□ -0.25
ATL3-203ENST00000538786 FAM98AQ8NCA5 519 aaKnown RBP13.5□□□□□ -0.25
ATL3-203ENST00000538786 TRMT61AQ96FX7 289 aaKnown RBP13.5□□□□□ -0.25
ATL3-203ENST00000538786 DEPDC7Q96QD5 511 aa13.5□□□□□ -0.25
ATL3-203ENST00000538786 ASPNQ9BXN1 380 aa13.5□□□□□ -0.25
ATL3-203ENST00000538786 SMOC1Q9H4F8 434 aa13.5□□□□□ -0.25
ATL3-203ENST00000538786 NANSQ9NR45 359 aa13.5□□□□□ -0.25
ATL3-203ENST00000538786 RXFP3Q9NSD7 469 aa13.5□□□□□ -0.25
ATL3-203ENST00000538786 HIF3AQ9Y2N7 669 aa13.5□□□□□ -0.25
ATL3-203ENST00000538786 TRBV11-1A0A0K0K1C0 115 aa13.49□□□□□ -0.25
ATL3-203ENST00000538786 PLD2O14939 933 aa13.49□□□□□ -0.25
ATL3-203ENST00000538786 SCO2O43819 266 aa13.49□□□□□ -0.25
ATL3-203ENST00000538786 NUDT14O95848 222 aa13.49□□□□□ -0.25
ATL3-203ENST00000538786 ASAH2BP0C7U1 165 aa13.49□□□□□ -0.25
ATL3-203ENST00000538786 BMP4P12644 408 aa13.49□□□□□ -0.25
ATL3-203ENST00000538786 CXCR1P25024 350 aa13.49□□□□□ -0.25
ATL3-203ENST00000538786 GABRA5P31644 462 aa13.49□□□□□ -0.25
ATL3-203ENST00000538786 P2RX1P51575 399 aa13.49□□□□□ -0.25
ATL3-203ENST00000538786 SLC26A5P58743 744 aa13.49□□□□□ -0.25
ATL3-203ENST00000538786 MC2RQ01718 297 aa13.49□□□□□ -0.25
ATL3-203ENST00000538786 TMEM99Q8N816 258 aa13.49□□□□□ -0.25
ATL3-203ENST00000538786 OR5L2Q8NGL0 311 aa13.49□□□□□ -0.25
ATL3-203ENST00000538786 OR4K13Q8NH42 304 aa13.49□□□□□ -0.25
ATL3-203ENST00000538786 SPRYD4Q8WW59 207 aaPredicted RBP13.49□□□□□ -0.25
ATL3-203ENST00000538786 ATOH1Q92858 354 aaPredicted RBP13.49□□□□□ -0.25
ATL3-203ENST00000538786 MOGAT1Q96PD6 335 aa13.49□□□□□ -0.25
ATL3-203ENST00000538786 TXNL4BQ9NX01 149 aaKnown RBP13.49□□□□□ -0.25
ATL3-203ENST00000538786 FBXL4Q9UKA2 621 aa13.49□□□□□ -0.25
ATL3-203ENST00000538786 NXT1Q9UKK6 140 aaKnown RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms