RNA–Protein interactions for RNA: ENST00000538475.5

USP28-207, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 1,081 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-207ENST00000538475 DMKNQ6E0U4 476 aaPredicted RBP6.19□□□□□ -1.42
USP28-207ENST00000538475 OR5M10Q6IEU7 315 aa6.19□□□□□ -1.42
USP28-207ENST00000538475 DRAM2Q6UX65 266 aa6.19□□□□□ -1.42
USP28-207ENST00000538475 UNQ9370/PRO34162Q6UXP9 181 aa6.19□□□□□ -1.42
USP28-207ENST00000538475 ACOT7LQ6ZUV0 252 aa6.19□□□□□ -1.42
USP28-207ENST00000538475 MEPCEQ7L2J0 689 aaKnown RBP6.19□□□□□ -1.42
USP28-207ENST00000538475 NDUFAF7Q7L592 441 aa6.19□□□□□ -1.42
USP28-207ENST00000538475 GPR142Q7Z601 462 aa6.19□□□□□ -1.42
USP28-207ENST00000538475 CEACAM19Q7Z692 300 aa6.19□□□□□ -1.42
USP28-207ENST00000538475 THOC6Q86W42 341 aaKnown RBP6.19□□□□□ -1.42
USP28-207ENST00000538475 NR2C2APQ86WQ0 139 aa6.19□□□□□ -1.42
USP28-207ENST00000538475 ANGPTL5Q86XS5 388 aa6.19□□□□□ -1.42
USP28-207ENST00000538475 LDLRAD3Q86YD5 345 aa6.19□□□□□ -1.42
USP28-207ENST00000538475 KLBQ86Z14 1044 aa6.19□□□□□ -1.42
USP28-207ENST00000538475 MISPQ8IVT2 679 aa6.19□□□□□ -1.42
USP28-207ENST00000538475 SERPINA12Q8IW75 414 aa6.19□□□□□ -1.42
USP28-207ENST00000538475 SYS1Q8N2H4 156 aa6.19□□□□□ -1.42
USP28-207ENST00000538475 HDDC3Q8N4P3 179 aa6.19□□□□□ -1.42
USP28-207ENST00000538475 WDSUB1Q8N9V3 476 aa6.19□□□□□ -1.42
USP28-207ENST00000538475 OR6N1Q8NGY5 312 aa6.19□□□□□ -1.42
USP28-207ENST00000538475 OR56A3Q8NH54 315 aa6.19□□□□□ -1.42
USP28-207ENST00000538475 STOML3Q8TAV4 291 aa6.19□□□□□ -1.42
USP28-207ENST00000538475 C16orf78Q8WTQ4 265 aa6.19□□□□□ -1.42
USP28-207ENST00000538475 SLC38A5Q8WUX1 472 aa6.19□□□□□ -1.42
USP28-207ENST00000538475 PCNPQ8WW12 178 aaKnown RBP6.19□□□□□ -1.42
USP28-207ENST00000538475 DNAJB3Q8WWF6 145 aa6.19□□□□□ -1.42
USP28-207ENST00000538475 SLC5A11Q8WWX8 675 aa6.19□□□□□ -1.42
USP28-207ENST00000538475 MYLIPQ8WY64 445 aa6.19□□□□□ -1.42
USP28-207ENST00000538475 THRSPQ92748 146 aa6.19□□□□□ -1.42
USP28-207ENST00000538475 CPNE4Q96A23 557 aaPredicted RBP6.19□□□□□ -1.42
USP28-207ENST00000538475 MOAP1Q96BY2 351 aa6.19□□□□□ -1.42
USP28-207ENST00000538475 MALSU1Q96EH3 234 aa6.19□□□□□ -1.42
USP28-207ENST00000538475 SAT2Q96F10 170 aaPredicted RBP6.19□□□□□ -1.42
USP28-207ENST00000538475 S100A16Q96FQ6 103 aaKnown RBP6.19□□□□□ -1.42
USP28-207ENST00000538475 TRMT2BQ96GJ1 504 aaKnown RBP6.19□□□□□ -1.42
USP28-207ENST00000538475 LIN37Q96GY3 246 aaPredicted RBP6.19□□□□□ -1.42
USP28-207ENST00000538475 ELF4Q99607 663 aaPredicted RBP6.19□□□□□ -1.42
USP28-207ENST00000538475 CDC6Q99741 560 aa6.19□□□□□ -1.42
USP28-207ENST00000538475 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.19□□□□□ -1.42
USP28-207ENST00000538475 TMPRSS5Q9H3S3 457 aa6.19□□□□□ -1.42
USP28-207ENST00000538475 C1orf198Q9H425 327 aa6.19□□□□□ -1.42
USP28-207ENST00000538475 SGK2Q9HBY8 427 aa6.19□□□□□ -1.42
USP28-207ENST00000538475 CALML5Q9NZT1 146 aa6.19□□□□□ -1.42
USP28-207ENST00000538475 NFKBIL1Q9UBC1 381 aaPredicted RBP6.19□□□□□ -1.42
USP28-207ENST00000538475 P2RX2Q9UBL9 471 aa6.19□□□□□ -1.42
USP28-207ENST00000538475 ZNF69Q9UC07 566 aa6.19□□□□□ -1.42
USP28-207ENST00000538475 MRTO4Q9UKD2 239 aaKnown RBP6.19□□□□□ -1.42
USP28-207ENST00000538475 SLC22A14Q9Y267 594 aa6.19□□□□□ -1.42
USP28-207ENST00000538475 COL4A5P29400 1685 aa6.19□□□□□ -1.42
USP28-207ENST00000538475 SCN5AQ14524 2016 aa6.18□□□□□ -1.42
USP28-207ENST00000538475 SCN2AQ99250 2005 aa6.18□□□□□ -1.42
USP28-207ENST00000538475 HEATR5BQ9P2D3 2071 aa6.18□□□□□ -1.42
USP28-207ENST00000538475 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.18□□□□□ -1.42
USP28-207ENST00000538475 METTL21EPA6NDL7 271 aa6.18□□□□□ -1.42
USP28-207ENST00000538475 OR6C68A6NDL8 312 aa6.18□□□□□ -1.42
USP28-207ENST00000538475 ZNF503-AS2A6NEH8 195 aa6.18□□□□□ -1.42
USP28-207ENST00000538475 NPIPB9F8W1W9 429 aa6.18□□□□□ -1.42
USP28-207ENST00000538475 H3BNC9 293 aa6.18□□□□□ -1.42
USP28-207ENST00000538475 H7BY64 318 aa6.18□□□□□ -1.42
USP28-207ENST00000538475 PRAMEF4O60810 478 aa6.18□□□□□ -1.42
USP28-207ENST00000538475 CNMDO75829 334 aa6.18□□□□□ -1.42
USP28-207ENST00000538475 SLCO2B1O94956 709 aa6.18□□□□□ -1.42
USP28-207ENST00000538475 MT-ND4LP03901 98 aa6.18□□□□□ -1.42
USP28-207ENST00000538475 CATP04040 527 aaKnown RBP6.18□□□□□ -1.42
USP28-207ENST00000538475 CRYBA1P05813 215 aa6.18□□□□□ -1.42
USP28-207ENST00000538475 FCER2P06734 321 aa6.18□□□□□ -1.42
USP28-207ENST00000538475 C8AP07357 584 aa6.18□□□□□ -1.42
USP28-207ENST00000538475 RHOCP08134 193 aa6.18□□□□□ -1.42
USP28-207ENST00000538475 ANKRD34CP0C6C1 535 aa6.18□□□□□ -1.42
USP28-207ENST00000538475 SPP1P10451 314 aa6.18□□□□□ -1.42
USP28-207ENST00000538475 CD79AP11912 226 aa6.18□□□□□ -1.42
USP28-207ENST00000538475 POU3F2P20265 443 aaPredicted RBP6.18□□□□□ -1.42
USP28-207ENST00000538475 DRD5P21918 477 aa6.18□□□□□ -1.42
USP28-207ENST00000538475 MST1P26927 711 aa6.18□□□□□ -1.42
USP28-207ENST00000538475 HNF1BP35680 557 aa6.18□□□□□ -1.42
USP28-207ENST00000538475 EIF2S3P41091 472 aaKnown RBP6.18□□□□□ -1.42
USP28-207ENST00000538475 RAD52P43351 418 aa6.18□□□□□ -1.42
USP28-207ENST00000538475 RABIFP47224 123 aa6.18□□□□□ -1.42
USP28-207ENST00000538475 PPIAP62937 165 aaKnown RBP6.18□□□□□ -1.42
USP28-207ENST00000538475 EIF5AP63241 154 aaKnown RBP6.18□□□□□ -1.42
USP28-207ENST00000538475 TNFRSF17Q02223 184 aa6.18□□□□□ -1.42
USP28-207ENST00000538475 ZNF177Q13360 481 aaPredicted RBP6.18□□□□□ -1.42
USP28-207ENST00000538475 FZD5Q13467 585 aa6.18□□□□□ -1.42
USP28-207ENST00000538475 ZNF124Q15973 351 aa6.18□□□□□ -1.42
USP28-207ENST00000538475 PNLIPRP3Q17RR3 467 aa6.18□□□□□ -1.42
USP28-207ENST00000538475 NDUFAF6Q330K2 333 aa6.18□□□□□ -1.42
USP28-207ENST00000538475 ATP13A5Q4VNC0 1218 aa6.18□□□□□ -1.42
USP28-207ENST00000538475 ZNF385BQ569K4 471 aa6.18□□□□□ -1.42
USP28-207ENST00000538475 PRAMEF9Q5VWM5 478 aa6.18□□□□□ -1.42
USP28-207ENST00000538475 GLT8D1Q68CQ7 371 aa6.18□□□□□ -1.42
USP28-207ENST00000538475 TSSK4Q6SA08 328 aa6.18□□□□□ -1.42
USP28-207ENST00000538475 SERPINA13PQ6UXR4 307 aa6.18□□□□□ -1.42
USP28-207ENST00000538475 PARGQ86W56 976 aa6.18□□□□□ -1.42
USP28-207ENST00000538475 TMEM151BQ8IW70 566 aa6.18□□□□□ -1.42
USP28-207ENST00000538475 APCDD1Q8J025 514 aa6.18□□□□□ -1.42
USP28-207ENST00000538475 PUSL1Q8N0Z8 303 aaKnown RBP6.18□□□□□ -1.42
USP28-207ENST00000538475 TMEM185AQ8NFB2 350 aa6.18□□□□□ -1.42
USP28-207ENST00000538475 NLGN2Q8NFZ4 835 aa6.18□□□□□ -1.42
USP28-207ENST00000538475 OR2T33Q8NG76 320 aa6.18□□□□□ -1.42
USP28-207ENST00000538475 OR6T1Q8NGN1 323 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms