RNA–Protein interactions for RNA: ENST00000538470.2

DDB1-212, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-212ENST00000538470 HMGN4O00479 90 aa7.62□□□□□ -1.19
DDB1-212ENST00000538470 TLX2O43763 284 aaPredicted RBP7.62□□□□□ -1.19
DDB1-212ENST00000538470 BCAS1O75363 584 aaPredicted RBP7.62□□□□□ -1.19
DDB1-212ENST00000538470 MRPL33O75394 65 aaKnown RBP7.62□□□□□ -1.19
DDB1-212ENST00000538470 RAD51DO75771 328 aa7.62□□□□□ -1.19
DDB1-212ENST00000538470 IGHV4-39P01824 125 aa7.62□□□□□ -1.19
DDB1-212ENST00000538470 TP53P04637 393 aaPredicted RBP7.62□□□□□ -1.19
DDB1-212ENST00000538470 PGRP06401 933 aa7.62□□□□□ -1.19
DDB1-212ENST00000538470 DBIP07108 87 aaKnown RBP7.62□□□□□ -1.19
DDB1-212ENST00000538470 BGNP21810 368 aa7.62□□□□□ -1.19
DDB1-212ENST00000538470 EDNRAP25101 427 aa7.62□□□□□ -1.19
DDB1-212ENST00000538470 RYKP34925 604 aa7.62□□□□□ -1.19
DDB1-212ENST00000538470 CDKN1AP38936 164 aa7.62□□□□□ -1.19
DDB1-212ENST00000538470 IDH2P48735 452 aaKnown RBP7.62□□□□□ -1.19
DDB1-212ENST00000538470 CASP9P55211 416 aa7.62□□□□□ -1.19
DDB1-212ENST00000538470 SLC35A1P78382 337 aa7.62□□□□□ -1.19
DDB1-212ENST00000538470 CHRNEQ04844 493 aa7.62□□□□□ -1.19
DDB1-212ENST00000538470 FAPQ12884 760 aa7.62□□□□□ -1.19
DDB1-212ENST00000538470 STX3Q13277 289 aa7.62□□□□□ -1.19
DDB1-212ENST00000538470 LIN52Q52LA3 116 aa7.62□□□□□ -1.19
DDB1-212ENST00000538470 TNFAIP8L3Q5GJ75 292 aa7.62□□□□□ -1.19
DDB1-212ENST00000538470 HHATQ5VTY9 493 aa7.62□□□□□ -1.19
DDB1-212ENST00000538470 ZNF544Q6NX49 715 aa7.62□□□□□ -1.19
DDB1-212ENST00000538470 PAQR6Q6TCH4 344 aa7.62□□□□□ -1.19
DDB1-212ENST00000538470 OLIG3Q7RTU3 272 aa7.62□□□□□ -1.19
DDB1-212ENST00000538470 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.62□□□□□ -1.19
DDB1-212ENST00000538470 HDXQ7Z353 690 aa7.62□□□□□ -1.19
DDB1-212ENST00000538470 SPATA19Q7Z5L4 167 aa7.62□□□□□ -1.19
DDB1-212ENST00000538470 ATG4DQ86TL0 474 aaPredicted RBP7.62□□□□□ -1.19
DDB1-212ENST00000538470 RNF130Q86XS8 419 aa7.62□□□□□ -1.19
DDB1-212ENST00000538470 UBE2J2Q8N2K1 259 aa7.62□□□□□ -1.19
DDB1-212ENST00000538470 GOLGA6L1Q8N7Z2 621 aa7.62□□□□□ -1.19
DDB1-212ENST00000538470 NEUROG1Q92886 237 aa7.62□□□□□ -1.19
DDB1-212ENST00000538470 ARL5BQ96KC2 179 aa7.62□□□□□ -1.19
DDB1-212ENST00000538470 ADAD1Q96M93 576 aaKnown RBP7.62□□□□□ -1.19
DDB1-212ENST00000538470 PANX1Q96RD7 426 aa7.62□□□□□ -1.19
DDB1-212ENST00000538470 ZBTB18Q99592 522 aa7.62□□□□□ -1.19
DDB1-212ENST00000538470 NAA11Q9BSU3 229 aaPredicted RBP7.62□□□□□ -1.19
DDB1-212ENST00000538470 REG4Q9BYZ8 158 aa7.62□□□□□ -1.19
DDB1-212ENST00000538470 AMBRA1Q9C0C7 1298 aa7.62□□□□□ -1.19
DDB1-212ENST00000538470 OR11A1Q9GZK7 315 aa7.62□□□□□ -1.19
DDB1-212ENST00000538470 C20orf27Q9GZN8 174 aa7.62□□□□□ -1.19
DDB1-212ENST00000538470 SLC38A1Q9H2H9 487 aa7.62□□□□□ -1.19
DDB1-212ENST00000538470 PIF1Q9H611 641 aa7.62□□□□□ -1.19
DDB1-212ENST00000538470 TMBIM4Q9HC24 238 aa7.62□□□□□ -1.19
DDB1-212ENST00000538470 PARPBPQ9NWS1 579 aa7.62□□□□□ -1.19
DDB1-212ENST00000538470 CALML5Q9NZT1 146 aa7.62□□□□□ -1.19
DDB1-212ENST00000538470 AMDHD2Q9Y303 409 aa7.62□□□□□ -1.19
DDB1-212ENST00000538470 SLC25A15Q9Y619 301 aa7.62□□□□□ -1.19
DDB1-212ENST00000538470 ARFGEF3Q5TH69 2177 aa7.61□□□□□ -1.19
DDB1-212ENST00000538470 DSPPQ9NZW4 1301 aa7.61□□□□□ -1.19
DDB1-212ENST00000538470 YLPM1P49750 1951 aaKnown RBP7.61□□□□□ -1.19
DDB1-212ENST00000538470 TMED7-TICAM2A0A0A6YYA0 188 aa7.61□□□□□ -1.19
DDB1-212ENST00000538470 PRAMEF27A3QJZ7 478 aa7.61□□□□□ -1.19
DDB1-212ENST00000538470 CFAP73A6NFT4 308 aa7.61□□□□□ -1.19
DDB1-212ENST00000538470 CCDC154A6NI56 674 aa7.61□□□□□ -1.19
DDB1-212ENST00000538470 CCT8L1PA6NM43 557 aa7.61□□□□□ -1.19
DDB1-212ENST00000538470 TRPC5OSA6NMA1 111 aa7.61□□□□□ -1.19
DDB1-212ENST00000538470 C9JVG2 144 aa7.61□□□□□ -1.19
DDB1-212ENST00000538470 RNF223E7ERA6 249 aa7.61□□□□□ -1.19
DDB1-212ENST00000538470 SLCO1B7G3V0H7 640 aa7.61□□□□□ -1.19
DDB1-212ENST00000538470 SDHDO14521 159 aa7.61□□□□□ -1.19
DDB1-212ENST00000538470 CD5LO43866 347 aa7.61□□□□□ -1.19
DDB1-212ENST00000538470 RAMP1O60894 148 aa7.61□□□□□ -1.19
DDB1-212ENST00000538470 CRLF1O75462 422 aa7.61□□□□□ -1.19
DDB1-212ENST00000538470 KRT75O95678 551 aa7.61□□□□□ -1.19
DDB1-212ENST00000538470 CD8AP01732 235 aa7.61□□□□□ -1.19
DDB1-212ENST00000538470 CHRM4P08173 479 aa7.61□□□□□ -1.19
DDB1-212ENST00000538470 ALDOCP09972 364 aaKnown RBP7.61□□□□□ -1.19
DDB1-212ENST00000538470 CD40P25942 277 aa7.61□□□□□ -1.19
DDB1-212ENST00000538470 ACVR1BP36896 505 aa7.61□□□□□ -1.19
DDB1-212ENST00000538470 SLC1A3P43003 542 aa7.61□□□□□ -1.19
DDB1-212ENST00000538470 OR2B6P58173 313 aa7.61□□□□□ -1.19
DDB1-212ENST00000538470 H3F3AP84243 136 aa7.61□□□□□ -1.19
DDB1-212ENST00000538470 TGFBR3Q03167 851 aa7.61□□□□□ -1.19
DDB1-212ENST00000538470 BST1Q10588 318 aa7.61□□□□□ -1.19
DDB1-212ENST00000538470 EPS8Q12929 822 aa7.61□□□□□ -1.19
DDB1-212ENST00000538470 GSTA3Q16772 222 aa7.61□□□□□ -1.19
DDB1-212ENST00000538470 ZSWIM7Q19AV6 140 aa7.61□□□□□ -1.19
DDB1-212ENST00000538470 MRPL2Q5T653 305 aaKnown RBP7.61□□□□□ -1.19
DDB1-212ENST00000538470 RNF220Q5VTB9 566 aa7.61□□□□□ -1.19
DDB1-212ENST00000538470 C11orf71Q6IPW1 123 aa7.61□□□□□ -1.19
DDB1-212ENST00000538470 SLC22A25Q6T423 547 aa7.61□□□□□ -1.19
DDB1-212ENST00000538470 CASP12Q6UXS9 341 aa7.61□□□□□ -1.19
DDB1-212ENST00000538470 MSANTD1Q6ZTZ1 278 aa7.61□□□□□ -1.19
DDB1-212ENST00000538470 ABHD12BQ7Z5M8 362 aaPredicted RBP7.61□□□□□ -1.19
DDB1-212ENST00000538470 ADGRG3Q86Y34 549 aa7.61□□□□□ -1.19
DDB1-212ENST00000538470 PEX5LQ8IYB4 626 aa7.61□□□□□ -1.19
DDB1-212ENST00000538470 FBXL14Q8N1E6 418 aa7.61□□□□□ -1.19
DDB1-212ENST00000538470 DEPDC4Q8N2C3 294 aa7.61□□□□□ -1.19
DDB1-212ENST00000538470 CNOT9Q92600 299 aaKnown RBP7.61□□□□□ -1.19
DDB1-212ENST00000538470 TMEM45BQ96B21 275 aa7.61□□□□□ -1.19
DDB1-212ENST00000538470 ZNF775Q96BV0 537 aaPredicted RBP7.61□□□□□ -1.19
DDB1-212ENST00000538470 TLCD1Q96CP7 247 aa7.61□□□□□ -1.19
DDB1-212ENST00000538470 MUS81Q96NY9 551 aa7.61□□□□□ -1.19
DDB1-212ENST00000538470 DHRS9Q9BPW9 319 aa7.61□□□□□ -1.19
DDB1-212ENST00000538470 MTHFD2LQ9H903 347 aaPredicted RBP7.61□□□□□ -1.19
DDB1-212ENST00000538470 CBLN4Q9NTU7 201 aa7.61□□□□□ -1.19
DDB1-212ENST00000538470 NKIRAS1Q9NYS0 192 aa7.61□□□□□ -1.19
DDB1-212ENST00000538470 P2RX2Q9UBL9 471 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms