RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 COL9A1P20849 921 aa4.97□□□□□ -1.61
LRP6-203ENST00000538239 AQP2P41181 271 aa4.97□□□□□ -1.61
LRP6-203ENST00000538239 IL10RAQ13651 578 aa4.97□□□□□ -1.61
LRP6-203ENST00000538239 CPEB2Q7Z5Q1 589 aaKnown RBP4.97□□□□□ -1.61
LRP6-203ENST00000538239 SLC38A5Q8WUX1 472 aa4.97□□□□□ -1.61
LRP6-203ENST00000538239 UBXN10Q96LJ8 280 aa4.97□□□□□ -1.61
LRP6-203ENST00000538239 AIFM2Q9BRQ8 373 aa4.97□□□□□ -1.61
LRP6-203ENST00000538239 SLC6A15Q9H2J7 730 aa4.97□□□□□ -1.61
LRP6-203ENST00000538239 SMOXQ9NWM0 555 aa4.97□□□□□ -1.61
LRP6-203ENST00000538239 COL24A1Q17RW2 1714 aa4.97□□□□□ -1.61
LRP6-203ENST00000538239 TRAV36DV7A0A075B6V5 113 aa4.97□□□□□ -1.61
LRP6-203ENST00000538239 A0A0A6YYH2 397 aa4.97□□□□□ -1.61
LRP6-203ENST00000538239 A0A1B0GVC2 190 aa4.97□□□□□ -1.61
LRP6-203ENST00000538239 MEIS3P1A6NDR6 274 aa4.97□□□□□ -1.61
LRP6-203ENST00000538239 OR6C70A6NIJ9 312 aa4.97□□□□□ -1.61
LRP6-203ENST00000538239 A6NJ64 397 aa4.97□□□□□ -1.61
LRP6-203ENST00000538239 ZNF593O00488 134 aaPredicted RBP4.97□□□□□ -1.61
LRP6-203ENST00000538239 MSL3P1P0C860 447 aa4.97□□□□□ -1.61
LRP6-203ENST00000538239 DHRS4L1P0CG22 281 aa4.97□□□□□ -1.61
LRP6-203ENST00000538239 ETV4P43268 484 aa4.97□□□□□ -1.61
LRP6-203ENST00000538239 EPHA5P54756 1037 aa4.97□□□□□ -1.61
LRP6-203ENST00000538239 HSD17B7P56937 341 aa4.97□□□□□ -1.61
LRP6-203ENST00000538239 MS4A2Q01362 244 aa4.97□□□□□ -1.61
LRP6-203ENST00000538239 GPR50Q13585 617 aa4.97□□□□□ -1.61
LRP6-203ENST00000538239 GNMTQ14749 295 aa4.97□□□□□ -1.61
LRP6-203ENST00000538239 PAPD5Q8NDF8 572 aaKnown RBP4.97□□□□□ -1.61
LRP6-203ENST00000538239 TBC1D15Q8TC07 691 aa4.97□□□□□ -1.61
LRP6-203ENST00000538239 MS4A6EQ96DS6 147 aa4.97□□□□□ -1.61
LRP6-203ENST00000538239 ELOVL3Q9HB03 270 aa4.97□□□□□ -1.61
LRP6-203ENST00000538239 LYRM4Q9HD34 91 aa4.97□□□□□ -1.61
LRP6-203ENST00000538239 MEPEQ9NQ76 525 aaPredicted RBP4.97□□□□□ -1.61
LRP6-203ENST00000538239 ERVK13-1Q9NX77 482 aa4.97□□□□□ -1.61
LRP6-203ENST00000538239 USP22Q9UPT9 525 aa4.97□□□□□ -1.61
LRP6-203ENST00000538239 HIF3AQ9Y2N7 669 aa4.97□□□□□ -1.61
LRP6-203ENST00000538239 MTCH2Q9Y6C9 303 aa4.97□□□□□ -1.61
LRP6-203ENST00000538239 TMEM269A0A1B0GVZ9 245 aa4.97□□□□□ -1.61
LRP6-203ENST00000538239 STK17BO94768 372 aa4.97□□□□□ -1.61
LRP6-203ENST00000538239 IGLV3-25P01717 112 aa4.97□□□□□ -1.61
LRP6-203ENST00000538239 TRIP6Q15654 476 aaKnown RBP4.97□□□□□ -1.61
LRP6-203ENST00000538239 YOD1Q5VVQ6 348 aaPredicted RBP4.97□□□□□ -1.61
LRP6-203ENST00000538239 TUBA3EQ6PEY2 450 aa4.97□□□□□ -1.61
LRP6-203ENST00000538239 TBPL2Q6SJ96 375 aa4.97□□□□□ -1.61
LRP6-203ENST00000538239 SLC35D2Q76EJ3 337 aa4.97□□□□□ -1.61
LRP6-203ENST00000538239 SFTPA1Q8IWL2 248 aa4.97□□□□□ -1.61
LRP6-203ENST00000538239 L3MBTL4Q8NA19 623 aa4.97□□□□□ -1.61
LRP6-203ENST00000538239 OR1J2Q8NGS2 313 aa4.97□□□□□ -1.61
LRP6-203ENST00000538239 GAB3Q8WWW8 586 aa4.97□□□□□ -1.61
LRP6-203ENST00000538239 KATNB1Q9BVA0 655 aa4.97□□□□□ -1.61
LRP6-203ENST00000538239 RLIMQ9NVW2 624 aa4.97□□□□□ -1.61
LRP6-203ENST00000538239 NPFFR2Q9Y5X5 522 aa4.97□□□□□ -1.61
LRP6-203ENST00000538239 STMND1H3BQB6 276 aa4.97□□□□□ -1.61
LRP6-203ENST00000538239 MEN1O00255 615 aa4.97□□□□□ -1.61
LRP6-203ENST00000538239 AKR7A3O95154 331 aa4.97□□□□□ -1.61
LRP6-203ENST00000538239 ZGLP1P0C6A0 271 aa4.97□□□□□ -1.61
LRP6-203ENST00000538239 SPOCK1Q08629 439 aa4.97□□□□□ -1.61
LRP6-203ENST00000538239 ELAVL1Q15717 326 aaKnown RBP4.97□□□□□ -1.61
LRP6-203ENST00000538239 TRMT12Q53H54 448 aaKnown RBP4.97□□□□□ -1.61
LRP6-203ENST00000538239 ZNF517Q6ZMY9 492 aaPredicted RBP4.97□□□□□ -1.61
LRP6-203ENST00000538239 CFAP77Q6ZQR2 320 aa4.97□□□□□ -1.61
LRP6-203ENST00000538239 NDUFAF7Q7L592 441 aa4.97□□□□□ -1.61
LRP6-203ENST00000538239 OR5D14Q8NGL3 314 aa4.97□□□□□ -1.61
LRP6-203ENST00000538239 ZNF707Q96C28 371 aaPredicted RBP4.97□□□□□ -1.61
LRP6-203ENST00000538239 PHOX2BQ99453 314 aa4.97□□□□□ -1.61
LRP6-203ENST00000538239 MENTQ9BUN1 341 aa4.97□□□□□ -1.61
LRP6-203ENST00000538239 POLE4Q9NR33 117 aa4.97□□□□□ -1.61
LRP6-203ENST00000538239 CCDC59Q9P031 241 aaKnown RBP4.97□□□□□ -1.61
LRP6-203ENST00000538239 SERGEFQ9UGK8 458 aa4.97□□□□□ -1.61
LRP6-203ENST00000538239 TRAV18A0A075B6X5 111 aa4.96□□□□□ -1.61
LRP6-203ENST00000538239 ENSAO43768 121 aaKnown RBP4.96□□□□□ -1.61
LRP6-203ENST00000538239 LCMT2O60294 686 aaKnown RBP4.96□□□□□ -1.61
LRP6-203ENST00000538239 PIP5K1CO60331 668 aa4.96□□□□□ -1.61
LRP6-203ENST00000538239 GABBR2O75899 941 aa4.96□□□□□ -1.61
LRP6-203ENST00000538239 SLITRK5O94991 958 aa4.96□□□□□ -1.61
LRP6-203ENST00000538239 SDHBP21912 280 aa4.96□□□□□ -1.61
LRP6-203ENST00000538239 ERVK-16P61578 105 aa4.96□□□□□ -1.61
LRP6-203ENST00000538239 EIF5AP63241 154 aaKnown RBP4.96□□□□□ -1.61
LRP6-203ENST00000538239 SLC10A1Q14973 349 aa4.96□□□□□ -1.61
LRP6-203ENST00000538239 C1orf53Q5VUE5 145 aa4.96□□□□□ -1.61
LRP6-203ENST00000538239 GFRALQ6UXV0 394 aa4.96□□□□□ -1.61
LRP6-203ENST00000538239 MEPCEQ7L2J0 689 aaKnown RBP4.96□□□□□ -1.61
LRP6-203ENST00000538239 GTF2H4Q92759 462 aa4.96□□□□□ -1.61
LRP6-203ENST00000538239 TOMM40LQ969M1 308 aa4.96□□□□□ -1.61
LRP6-203ENST00000538239 PRR14Q9BWN1 585 aa4.96□□□□□ -1.61
LRP6-203ENST00000538239 C14orf119Q9NWQ9 140 aa4.96□□□□□ -1.61
LRP6-203ENST00000538239 ATP23Q9Y6H3 246 aa4.96□□□□□ -1.61
LRP6-203ENST00000538239 SPTY2D1-AS1A0A0U1RR47 76 aa4.96□□□□□ -1.61
LRP6-203ENST00000538239 ZNF814B7Z6K7 855 aa4.96□□□□□ -1.61
LRP6-203ENST00000538239 MT-CO3P00414 261 aa4.96□□□□□ -1.61
LRP6-203ENST00000538239 ARAFP10398 606 aa4.96□□□□□ -1.61
LRP6-203ENST00000538239 UGT2B10P36537 528 aa4.96□□□□□ -1.61
LRP6-203ENST00000538239 TBC1D28Q2M2D7 210 aa4.96□□□□□ -1.61
LRP6-203ENST00000538239 SLC22A6Q4U2R8 563 aa4.96□□□□□ -1.61
LRP6-203ENST00000538239 OGFRL1Q5TC84 451 aaPredicted RBP4.96□□□□□ -1.61
LRP6-203ENST00000538239 XKRXQ6PP77 449 aa4.96□□□□□ -1.61
LRP6-203ENST00000538239 TMEM207Q6UWW9 146 aa4.96□□□□□ -1.61
LRP6-203ENST00000538239 LINC00346Q8IVM7 164 aa4.96□□□□□ -1.61
LRP6-203ENST00000538239 GPR148Q8TDV2 347 aa4.96□□□□□ -1.61
LRP6-203ENST00000538239 TMEM255BQ8WV15 326 aa4.96□□□□□ -1.61
LRP6-203ENST00000538239 CHTF18Q8WVB6 975 aa4.96□□□□□ -1.61
LRP6-203ENST00000538239 CHST8Q9H2A9 424 aa4.96□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms