RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 LIPGQ9Y5X9 500 aa6.58□□□□□ -1.36
MSH6-209ENST00000538136 A0A1W2PRG6 482 aa6.57□□□□□ -1.36
MSH6-209ENST00000538136 hCG_1807616A0A1W2PRN6 198 aa6.57□□□□□ -1.36
MSH6-209ENST00000538136 TAF4O00268 1085 aa6.57□□□□□ -1.36
MSH6-209ENST00000538136 PLOD3O60568 738 aa6.57□□□□□ -1.36
MSH6-209ENST00000538136 RGS9O75916 674 aaPredicted RBP6.57□□□□□ -1.36
MSH6-209ENST00000538136 IGKV1D-16P01601 117 aa6.57□□□□□ -1.36
MSH6-209ENST00000538136 ACADSP16219 412 aa6.57□□□□□ -1.36
MSH6-209ENST00000538136 BLVRAP53004 296 aa6.57□□□□□ -1.36
MSH6-209ENST00000538136 RAD23AP54725 363 aa6.57□□□□□ -1.36
MSH6-209ENST00000538136 BIDP55957 195 aa6.57□□□□□ -1.36
MSH6-209ENST00000538136 FADDQ13158 208 aa6.57□□□□□ -1.36
MSH6-209ENST00000538136 SNCBQ16143 134 aa6.57□□□□□ -1.36
MSH6-209ENST00000538136 JMJD6Q6NYC1 403 aaPredicted RBP6.57□□□□□ -1.36
MSH6-209ENST00000538136 CORO6Q6QEF8 472 aa6.57□□□□□ -1.36
MSH6-209ENST00000538136 ZNF836Q6ZNA1 936 aa6.57□□□□□ -1.36
MSH6-209ENST00000538136 ERMP1Q7Z2K6 904 aa6.57□□□□□ -1.36
MSH6-209ENST00000538136 BCDIN3DQ7Z5W3 292 aaKnown RBP6.57□□□□□ -1.36
MSH6-209ENST00000538136 LINC00346Q8IVM7 164 aa6.57□□□□□ -1.36
MSH6-209ENST00000538136 RPRMLQ8N4K4 120 aa6.57□□□□□ -1.36
MSH6-209ENST00000538136 TCEANCQ8N8B7 351 aa6.57□□□□□ -1.36
MSH6-209ENST00000538136 MUCL1Q96DR8 90 aa6.57□□□□□ -1.36
MSH6-209ENST00000538136 FBXO17Q96EF6 278 aa6.57□□□□□ -1.36
MSH6-209ENST00000538136 PYURFQ96I23 114 aa6.57□□□□□ -1.36
MSH6-209ENST00000538136 FRMD6Q96NE9 622 aa6.57□□□□□ -1.36
MSH6-209ENST00000538136 FEVQ99581 238 aa6.57□□□□□ -1.36
MSH6-209ENST00000538136 PITX2Q99697 317 aa6.57□□□□□ -1.36
MSH6-209ENST00000538136 ADI1Q9BV57 179 aa6.57□□□□□ -1.36
MSH6-209ENST00000538136 ULBP2Q9BZM5 246 aa6.57□□□□□ -1.36
MSH6-209ENST00000538136 RPRD1BQ9NQG5 326 aaKnown RBP6.57□□□□□ -1.36
MSH6-209ENST00000538136 IFT52Q9Y366 437 aa6.57□□□□□ -1.36
MSH6-209ENST00000538136 NKX2-6A6NCS4 301 aa6.57□□□□□ -1.36
MSH6-209ENST00000538136 HNRNPCL2B2RXH8 293 aa6.57□□□□□ -1.36
MSH6-209ENST00000538136 K7ENP7 123 aa6.57□□□□□ -1.36
MSH6-209ENST00000538136 HNRNPCL1O60812 293 aaKnown RBP6.57□□□□□ -1.36
MSH6-209ENST00000538136 SCELO95171 688 aa6.57□□□□□ -1.36
MSH6-209ENST00000538136 CD82P27701 267 aa6.57□□□□□ -1.36
MSH6-209ENST00000538136 GNALP38405 381 aa6.57□□□□□ -1.36
MSH6-209ENST00000538136 ZNF83P51522 516 aa6.57□□□□□ -1.36
MSH6-209ENST00000538136 LIMK1P53667 647 aa6.57□□□□□ -1.36
MSH6-209ENST00000538136 NR1H2P55055 460 aa6.57□□□□□ -1.36
MSH6-209ENST00000538136 VLDLRP98155 873 aa6.57□□□□□ -1.36
MSH6-209ENST00000538136 GALNT18Q6P9A2 607 aa6.57□□□□□ -1.36
MSH6-209ENST00000538136 INO80CQ6PI98 192 aaPredicted RBP6.57□□□□□ -1.36
MSH6-209ENST00000538136 LACC1Q8IV20 430 aa6.57□□□□□ -1.36
MSH6-209ENST00000538136 ERI1Q8IV48 349 aaKnown RBP6.57□□□□□ -1.36
MSH6-209ENST00000538136 DPP10Q8N608 796 aa6.57□□□□□ -1.36
MSH6-209ENST00000538136 FAM83FQ8NEG4 500 aaPredicted RBP6.57□□□□□ -1.36
MSH6-209ENST00000538136 OR10D3Q8NH80 312 aa6.57□□□□□ -1.36
MSH6-209ENST00000538136 GOT1L1Q8NHS2 421 aaPredicted RBP6.57□□□□□ -1.36
MSH6-209ENST00000538136 SGTBQ96EQ0 304 aa6.57□□□□□ -1.36
MSH6-209ENST00000538136 ZNF583Q96ND8 569 aa6.57□□□□□ -1.36
MSH6-209ENST00000538136 NPAS1Q99742 590 aa6.57□□□□□ -1.36
MSH6-209ENST00000538136 GPATCH1Q9BRR8 931 aaKnown RBP6.57□□□□□ -1.36
MSH6-209ENST00000538136 MED17Q9NVC6 651 aa6.57□□□□□ -1.36
MSH6-209ENST00000538136 EMC9Q9Y3B6 208 aa6.57□□□□□ -1.36
MSH6-209ENST00000538136 PINLYPA6NC86 204 aa6.57□□□□□ -1.36
MSH6-209ENST00000538136 SLC16A7O60669 478 aa6.57□□□□□ -1.36
MSH6-209ENST00000538136 CBR3O75828 277 aa6.57□□□□□ -1.36
MSH6-209ENST00000538136 IGFBP5P24593 272 aa6.57□□□□□ -1.36
MSH6-209ENST00000538136 FABP6P51161 128 aa6.57□□□□□ -1.36
MSH6-209ENST00000538136 DCAF7P61962 342 aa6.57□□□□□ -1.36
MSH6-209ENST00000538136 ADPRMQ3LIE5 342 aa6.57□□□□□ -1.36
MSH6-209ENST00000538136 SYT14P1Q58G82 188 aa6.57□□□□□ -1.36
MSH6-209ENST00000538136 ZNF628Q5EBL2 1059 aa6.57□□□□□ -1.36
MSH6-209ENST00000538136 EPHX4Q8IUS5 362 aa6.57□□□□□ -1.36
MSH6-209ENST00000538136 STX19Q8N4C7 294 aa6.57□□□□□ -1.36
MSH6-209ENST00000538136 CCDC115Q96NT0 180 aa6.57□□□□□ -1.36
MSH6-209ENST00000538136 KLHDC3Q9BQ90 382 aa6.57□□□□□ -1.36
MSH6-209ENST00000538136 DGCR6LQ9BY27 220 aa6.57□□□□□ -1.36
MSH6-209ENST00000538136 RAB33BQ9H082 229 aa6.57□□□□□ -1.36
MSH6-209ENST00000538136 KAT8Q9H7Z6 458 aaKnown RBP6.57□□□□□ -1.36
MSH6-209ENST00000538136 DEPPQ9NTK1 212 aa6.57□□□□□ -1.36
MSH6-209ENST00000538136 ARMC1Q9NVT9 282 aa6.57□□□□□ -1.36
MSH6-209ENST00000538136 CHRNA9Q9UGM1 479 aa6.57□□□□□ -1.36
MSH6-209ENST00000538136 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.57□□□□□ -1.369e-8■■■■□ 21.9
MSH6-209ENST00000538136 POFUT2Q9Y2G5 429 aa6.57□□□□□ -1.36
MSH6-209ENST00000538136 AP4B1Q9Y6B7 739 aa6.57□□□□□ -1.36
MSH6-209ENST00000538136 A0A0G2JPF8 293 aa6.56□□□□□ -1.36
MSH6-209ENST00000538136 LINC00854A0A1B0GVQ3 168 aa6.56□□□□□ -1.36
MSH6-209ENST00000538136 RIIAD1A6NNX1 92 aa6.56□□□□□ -1.36
MSH6-209ENST00000538136 HNRNPCL3B7ZW38 293 aa6.56□□□□□ -1.36
MSH6-209ENST00000538136 DVL2O14641 736 aa6.56□□□□□ -1.36
MSH6-209ENST00000538136 HNRNPCL4P0DMR1 293 aa6.56□□□□□ -1.36
MSH6-209ENST00000538136 HOXD11P31277 338 aaPredicted RBP6.56□□□□□ -1.36
MSH6-209ENST00000538136 TNFSF10P50591 281 aa6.56□□□□□ -1.36
MSH6-209ENST00000538136 MLF1P58340 268 aa6.56□□□□□ -1.36
MSH6-209ENST00000538136 LGALS3BPQ08380 585 aa6.56□□□□□ -1.36
MSH6-209ENST00000538136 MFAP5Q13361 173 aa6.56□□□□□ -1.36
MSH6-209ENST00000538136 MRM1Q6IN84 353 aaKnown RBP6.56□□□□□ -1.36
MSH6-209ENST00000538136 ANKRD16Q6P6B7 361 aa6.56□□□□□ -1.36
MSH6-209ENST00000538136 TMEM239Q8WW34 195 aa6.56□□□□□ -1.36
MSH6-209ENST00000538136 TESCQ96BS2 214 aa6.56□□□□□ -1.36
MSH6-209ENST00000538136 DDIT4LQ96D03 193 aa6.56□□□□□ -1.36
MSH6-209ENST00000538136 ZMYND19Q96E35 227 aaPredicted RBP6.56□□□□□ -1.36
MSH6-209ENST00000538136 NEURL3Q96EH8 262 aa6.56□□□□□ -1.36
MSH6-209ENST00000538136 SLC38A1Q9H2H9 487 aa6.56□□□□□ -1.36
MSH6-209ENST00000538136 TPK1Q9H3S4 243 aa6.56□□□□□ -1.36
MSH6-209ENST00000538136 EGLN3Q9H6Z9 239 aa6.56□□□□□ -1.36
MSH6-209ENST00000538136 PLEK2Q9NYT0 353 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms