RNA–Protein interactions for RNA: ENST00000538120.5

CLIP1-210, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 2,472 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-210ENST00000538120 ZGLP1P0C6A0 271 aa9.87□□□□□ -0.83
CLIP1-210ENST00000538120 FUT1P19526 365 aa9.87□□□□□ -0.83
CLIP1-210ENST00000538120 RPS25P62851 125 aaKnown RBP9.87□□□□□ -0.83
CLIP1-210ENST00000538120 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.87□□□□□ -0.83
CLIP1-210ENST00000538120 MLLT11Q13015 90 aaPredicted RBP9.87□□□□□ -0.83
CLIP1-210ENST00000538120 NNATQ16517 81 aa9.87□□□□□ -0.83
CLIP1-210ENST00000538120 ANKRD39Q53RE8 183 aa9.87□□□□□ -0.83
CLIP1-210ENST00000538120 SLC30A6Q6NXT4 461 aa9.87□□□□□ -0.83
CLIP1-210ENST00000538120 GDPGP1Q6ZNW5 385 aa9.87□□□□□ -0.83
CLIP1-210ENST00000538120 PLXDC1Q8IUK5 500 aa9.87□□□□□ -0.83
CLIP1-210ENST00000538120 YIPF7Q8N8F6 280 aa9.87□□□□□ -0.83
CLIP1-210ENST00000538120 ZNF321PQ8N8H1 164 aa9.87□□□□□ -0.83
CLIP1-210ENST00000538120 ZFP41Q8N8Y5 198 aa9.87□□□□□ -0.83
CLIP1-210ENST00000538120 PROKR2Q8NFJ6 384 aa9.87□□□□□ -0.83
CLIP1-210ENST00000538120 OR52I1Q8NGK6 324 aa9.87□□□□□ -0.83
CLIP1-210ENST00000538120 TMEM239Q8WW34 195 aa9.87□□□□□ -0.83
CLIP1-210ENST00000538120 OSTF1Q92882 214 aa9.87□□□□□ -0.83
CLIP1-210ENST00000538120 ZNF578Q96N58 590 aaPredicted RBP9.87□□□□□ -0.83
CLIP1-210ENST00000538120 RACGAP1Q9H0H5 632 aa9.87□□□□□ -0.83
CLIP1-210ENST00000538120 SLA2Q9H6Q3 261 aa9.87□□□□□ -0.83
CLIP1-210ENST00000538120 ATP13A2Q9NQ11 1180 aa9.87□□□□□ -0.83
CLIP1-210ENST00000538120 ACOXLQ9NUZ1 547 aa9.87□□□□□ -0.83
CLIP1-210ENST00000538120 MRPS18AQ9NVS2 196 aaKnown RBP9.87□□□□□ -0.83
CLIP1-210ENST00000538120 DHCR7Q9UBM7 475 aaKnown RBP9.87□□□□□ -0.83
CLIP1-210ENST00000538120 SPIN1Q9Y657 262 aaPredicted RBP9.87□□□□□ -0.83
CLIP1-210ENST00000538120 KDM4EB2RXH2 506 aaPredicted RBP9.87□□□□□ -0.83
CLIP1-210ENST00000538120 SURF4O15260 269 aa9.87□□□□□ -0.83
CLIP1-210ENST00000538120 AKR7A2O43488 359 aa9.87□□□□□ -0.83
CLIP1-210ENST00000538120 DUX1O43812 170 aa9.87□□□□□ -0.83
CLIP1-210ENST00000538120 PRKNO60260 465 aaPredicted RBP9.87□□□□□ -0.83
CLIP1-210ENST00000538120 IFNA16P05015 189 aa9.87□□□□□ -0.83
CLIP1-210ENST00000538120 SFTPCP11686 197 aa9.87□□□□□ -0.83
CLIP1-210ENST00000538120 ALAS2P22557 587 aa9.87□□□□□ -0.83
CLIP1-210ENST00000538120 ATP6V1E1P36543 226 aa9.87□□□□□ -0.83
CLIP1-210ENST00000538120 HTR2BP41595 481 aa9.87□□□□□ -0.83
CLIP1-210ENST00000538120 SNRPD2P62316 118 aaKnown RBP9.87□□□□□ -0.83
CLIP1-210ENST00000538120 SERTAD2Q14140 314 aa9.87□□□□□ -0.83
CLIP1-210ENST00000538120 P2RY14Q15391 338 aa9.87□□□□□ -0.83
CLIP1-210ENST00000538120 GFOD2Q3B7J2 385 aa9.87□□□□□ -0.83
CLIP1-210ENST00000538120 XKRXQ6PP77 449 aa9.87□□□□□ -0.83
CLIP1-210ENST00000538120 SHFQ7M4L6 423 aa9.87□□□□□ -0.83
CLIP1-210ENST00000538120 KANSL1Q7Z3B3 1105 aa9.87□□□□□ -0.83
CLIP1-210ENST00000538120 RNF113BQ8IZP6 322 aaKnown RBP9.87□□□□□ -0.83
CLIP1-210ENST00000538120 CLDN22Q8N7P3 220 aa9.87□□□□□ -0.83
CLIP1-210ENST00000538120 BCORP1Q8N888 145 aa9.87□□□□□ -0.83
CLIP1-210ENST00000538120 SAMD8Q96LT4 415 aa9.87□□□□□ -0.83
CLIP1-210ENST00000538120 CITED4Q96RK1 184 aa9.87□□□□□ -0.83
CLIP1-210ENST00000538120 ZNF559Q9BR84 538 aa9.87□□□□□ -0.83
CLIP1-210ENST00000538120 DPH1Q9BZG8 443 aa9.87□□□□□ -0.83
CLIP1-210ENST00000538120 ENKD1Q9H0I2 346 aa9.87□□□□□ -0.83
CLIP1-210ENST00000538120 COMMD3Q9UBI1 195 aa9.87□□□□□ -0.83
CLIP1-210ENST00000538120 IL20RAQ9UHF4 553 aa9.87□□□□□ -0.83
CLIP1-210ENST00000538120 CLCA3PQ9Y6N3 262 aa9.87□□□□□ -0.83
CLIP1-210ENST00000538120 CDH10Q9Y6N8 788 aa9.87□□□□□ -0.83
CLIP1-210ENST00000538120 IGKV3D-11A0A0A0MRZ8 115 aa9.86□□□□□ -0.83
CLIP1-210ENST00000538120 A0A0B4J2E0 115 aa9.86□□□□□ -0.83
CLIP1-210ENST00000538120 A0A1B0GX12 115 aa9.86□□□□□ -0.83
CLIP1-210ENST00000538120 UNC119BA6NIH7 251 aa9.86□□□□□ -0.83
CLIP1-210ENST00000538120 POLR1CO15160 346 aaPredicted RBP9.86□□□□□ -0.83
CLIP1-210ENST00000538120 RFPL3O75679 317 aa9.86□□□□□ -0.83
CLIP1-210ENST00000538120 SLC2A10O95528 541 aa9.86□□□□□ -0.83
CLIP1-210ENST00000538120 CH25HO95992 272 aa9.86□□□□□ -0.83
CLIP1-210ENST00000538120 PDGFBP01127 241 aaPredicted RBP9.86□□□□□ -0.83
CLIP1-210ENST00000538120 TRAPPC2P0DI81 140 aa9.86□□□□□ -0.83
CLIP1-210ENST00000538120 TRAPPC2BP0DI82 140 aa9.86□□□□□ -0.83
CLIP1-210ENST00000538120 CD79BP40259 229 aa9.86□□□□□ -0.83
CLIP1-210ENST00000538120 GNG2P59768 71 aa9.86□□□□□ -0.83
CLIP1-210ENST00000538120 FGFBP1Q14512 234 aa9.86□□□□□ -0.83
CLIP1-210ENST00000538120 TATDN3Q17R31 274 aa9.86□□□□□ -0.83
CLIP1-210ENST00000538120 PGGHGQ32M88 737 aa9.86□□□□□ -0.83
CLIP1-210ENST00000538120 AADACL4Q5VUY2 407 aa9.86□□□□□ -0.83
CLIP1-210ENST00000538120 ZNF613Q6PF04 617 aa9.86□□□□□ -0.83
CLIP1-210ENST00000538120 PRSS42Q7Z5A4 293 aa9.86□□□□□ -0.83
CLIP1-210ENST00000538120 ZNF614Q8N883 585 aa9.86□□□□□ -0.83
CLIP1-210ENST00000538120 SPERTQ8NA61 448 aa9.86□□□□□ -0.83
CLIP1-210ENST00000538120 GATAD2BQ8WXI9 593 aa9.86□□□□□ -0.83
CLIP1-210ENST00000538120 TSLPQ969D9 159 aa9.86□□□□□ -0.83
CLIP1-210ENST00000538120 C1GALT1C1Q96EU7 318 aa9.86□□□□□ -0.83
CLIP1-210ENST00000538120 SENP5Q96HI0 755 aaPredicted RBP9.86□□□□□ -0.83
CLIP1-210ENST00000538120 PTCHD1Q96NR3 888 aa9.86□□□□□ -0.83
CLIP1-210ENST00000538120 RBM14Q96PK6 669 aaKnown RBP9.86□□□□□ -0.83
CLIP1-210ENST00000538120 LMF1Q96S06 567 aa9.86□□□□□ -0.83
CLIP1-210ENST00000538120 DCLRE1CQ96SD1 692 aaKnown RBP9.86□□□□□ -0.83
CLIP1-210ENST00000538120 NUDT22Q9BRQ3 303 aa9.86□□□□□ -0.83
CLIP1-210ENST00000538120 KATNB1Q9BVA0 655 aa9.86□□□□□ -0.83
CLIP1-210ENST00000538120 EVA1AQ9H8M9 152 aa9.86□□□□□ -0.83
CLIP1-210ENST00000538120 Q9N2J8 555 aa9.86□□□□□ -0.83
CLIP1-210ENST00000538120 MEPEQ9NQ76 525 aaPredicted RBP9.86□□□□□ -0.83
CLIP1-210ENST00000538120 SIDT1Q9NXL6 827 aaKnown RBP9.86□□□□□ -0.83
CLIP1-210ENST00000538120 PFDN2Q9UHV9 154 aa9.86□□□□□ -0.83
CLIP1-210ENST00000538120 CBLCQ9ULV8 474 aa9.86□□□□□ -0.83
CLIP1-210ENST00000538120 DIMT1Q9UNQ2 313 aaKnown RBP9.86□□□□□ -0.83
CLIP1-210ENST00000538120 A0A1B0GWA3 101 aa9.85□□□□□ -0.83
CLIP1-210ENST00000538120 C17orf105B2RV13 164 aa9.85□□□□□ -0.83
CLIP1-210ENST00000538120 H0YC42 278 aa9.85□□□□□ -0.83
CLIP1-210ENST00000538120 PRODHO43272 600 aa9.85□□□□□ -0.83
CLIP1-210ENST00000538120 IL1AP01583 271 aa9.85□□□□□ -0.83
CLIP1-210ENST00000538120 PSKH1P11801 424 aa9.85□□□□□ -0.83
CLIP1-210ENST00000538120 TDGF1P13385 188 aa9.85□□□□□ -0.83
CLIP1-210ENST00000538120 TBXA2RP21731 343 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms