RNA–Protein interactions for RNA: ENST00000537842.5

TNFRSF1A-210, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 404 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-210ENST00000537842 MGAT4BQ9UQ53 548 aa2.34□□□□□ -2.03
TNFRSF1A-210ENST00000537842 LSM4Q9Y4Z0 139 aaKnown RBP2.34□□□□□ -2.03
TNFRSF1A-210ENST00000537842 OARD1Q9Y530 152 aa2.34□□□□□ -2.03
TNFRSF1A-210ENST00000537842 HS3ST3B1Q9Y662 390 aa2.34□□□□□ -2.03
TNFRSF1A-210ENST00000537842 SHANK1Q9Y566 2161 aa2.34□□□□□ -2.04
TNFRSF1A-210ENST00000537842 ZNF407Q9C0G0 2248 aa2.34□□□□□ -2.04
TNFRSF1A-210ENST00000537842 SETD2Q9BYW2 2564 aaPredicted RBP2.34□□□□□ -2.04
TNFRSF1A-210ENST00000537842 TNRC6AQ8NDV7 1962 aaKnown RBP2.34□□□□□ -2.04
TNFRSF1A-210ENST00000537842 CREBBPQ92793 2442 aa2.33□□□□□ -2.04
TNFRSF1A-210ENST00000537842 PRR14LQ5THK1 2151 aa2.33□□□□□ -2.04
TNFRSF1A-210ENST00000537842 ALPK2Q86TB3 2170 aa2.33□□□□□ -2.04
TNFRSF1A-210ENST00000537842 HIVEP1P15822 2718 aa2.33□□□□□ -2.04
TNFRSF1A-210ENST00000537842 FAM240BA0A1B0GVZ2 78 aa2.33□□□□□ -2.04
TNFRSF1A-210ENST00000537842 A0A1B0GX78 115 aa2.33□□□□□ -2.04
TNFRSF1A-210ENST00000537842 XKRY2A2RUG3 117 aa2.33□□□□□ -2.04
TNFRSF1A-210ENST00000537842 ARGFXA6NJG6 315 aa2.33□□□□□ -2.04
TNFRSF1A-210ENST00000537842 SMIM23A6NLE4 172 aa2.33□□□□□ -2.04
TNFRSF1A-210ENST00000537842 A8MT66 165 aa2.33□□□□□ -2.04
TNFRSF1A-210ENST00000537842 A8MUI8 341 aa2.33□□□□□ -2.04
TNFRSF1A-210ENST00000537842 SUPT3HB4E1H0 165 aa2.33□□□□□ -2.04
TNFRSF1A-210ENST00000537842 C21orf140B9A014 251 aa2.33□□□□□ -2.04
TNFRSF1A-210ENST00000537842 NPIPB11E5RHQ5 1161 aa2.33□□□□□ -2.04
TNFRSF1A-210ENST00000537842 E9PI62 339 aa2.33□□□□□ -2.04
TNFRSF1A-210ENST00000537842 F8WDY8 70 aa2.33□□□□□ -2.04
TNFRSF1A-210ENST00000537842 M0QX08 132 aa2.33□□□□□ -2.04
TNFRSF1A-210ENST00000537842 KIF2AO00139 706 aaPredicted RBP2.33□□□□□ -2.04
TNFRSF1A-210ENST00000537842 CLIC1O00299 241 aa2.33□□□□□ -2.04
TNFRSF1A-210ENST00000537842 SAP18O00422 153 aaKnown RBP2.33□□□□□ -2.04
TNFRSF1A-210ENST00000537842 ADAM10O14672 748 aa2.33□□□□□ -2.04
TNFRSF1A-210ENST00000537842 HS3ST1O14792 307 aa2.33□□□□□ -2.04
TNFRSF1A-210ENST00000537842 PFDN6O15212 129 aa2.33□□□□□ -2.04
TNFRSF1A-210ENST00000537842 RRP8O43159 456 aaKnown RBP2.33□□□□□ -2.04
TNFRSF1A-210ENST00000537842 ZNHIT1O43257 154 aa2.33□□□□□ -2.04
TNFRSF1A-210ENST00000537842 ZW10O43264 779 aa2.33□□□□□ -2.04
TNFRSF1A-210ENST00000537842 CHST10O43529 356 aa2.33□□□□□ -2.04
TNFRSF1A-210ENST00000537842 SSX4O60224 188 aa2.33□□□□□ -2.04
TNFRSF1A-210ENST00000537842 PLIN3O60664 434 aa2.33□□□□□ -2.04
TNFRSF1A-210ENST00000537842 SRPX2O60687 465 aaPredicted RBP2.33□□□□□ -2.04
TNFRSF1A-210ENST00000537842 GALR3O60755 368 aaPredicted RBP2.33□□□□□ -2.04
TNFRSF1A-210ENST00000537842 SPAG7O75391 227 aa2.33□□□□□ -2.04
TNFRSF1A-210ENST00000537842 RDH16O75452 317 aa2.33□□□□□ -2.04
TNFRSF1A-210ENST00000537842 SUPT3HO75486 399 aa2.33□□□□□ -2.04
TNFRSF1A-210ENST00000537842 EEDO75530 441 aaKnown RBP2.33□□□□□ -2.04
TNFRSF1A-210ENST00000537842 STK16O75716 305 aa2.33□□□□□ -2.04
TNFRSF1A-210ENST00000537842 CDC123O75794 336 aaPredicted RBP2.33□□□□□ -2.04
TNFRSF1A-210ENST00000537842 CEACAM4O75871 244 aa2.33□□□□□ -2.04
TNFRSF1A-210ENST00000537842 NDUFB4O95168 129 aa2.33□□□□□ -2.04
TNFRSF1A-210ENST00000537842 CLPSP04118 112 aa2.33□□□□□ -2.04
TNFRSF1A-210ENST00000537842 SFTPBP07988 381 aa2.33□□□□□ -2.04
TNFRSF1A-210ENST00000537842 CD63P08962 238 aa2.33□□□□□ -2.04
TNFRSF1A-210ENST00000537842 SNRPAP09012 282 aaKnown RBP2.33□□□□□ -2.04
TNFRSF1A-210ENST00000537842 RNF224P0DH78 156 aa2.33□□□□□ -2.04
TNFRSF1A-210ENST00000537842 C1GALT1C1LP0DN25 315 aa2.33□□□□□ -2.04
TNFRSF1A-210ENST00000537842 NEFHP12036 1026 aa2.33□□□□□ -2.04
TNFRSF1A-210ENST00000537842 COX6A1P12074 109 aa2.33□□□□□ -2.04
TNFRSF1A-210ENST00000537842 EZRP15311 586 aaKnown RBP2.33□□□□□ -2.04
TNFRSF1A-210ENST00000537842 CD1EP15812 388 aa2.33□□□□□ -2.04
TNFRSF1A-210ENST00000537842 CYP2A7P20853 494 aa2.33□□□□□ -2.04
TNFRSF1A-210ENST00000537842 AGAP20933 346 aa2.33□□□□□ -2.04
TNFRSF1A-210ENST00000537842 GALP22466 123 aa2.33□□□□□ -2.04
TNFRSF1A-210ENST00000537842 DNASE1P24855 282 aa2.33□□□□□ -2.04
TNFRSF1A-210ENST00000537842 CHATP28329 748 aa2.33□□□□□ -2.04
TNFRSF1A-210ENST00000537842 TYK2P29597 1187 aa2.33□□□□□ -2.04
TNFRSF1A-210ENST00000537842 CMPK1P30085 196 aa2.33□□□□□ -2.04
TNFRSF1A-210ENST00000537842 STX2P32856 288 aa2.33□□□□□ -2.04
TNFRSF1A-210ENST00000537842 HSD17B2P37059 387 aa2.33□□□□□ -2.04
TNFRSF1A-210ENST00000537842 RGS4P49798 205 aa2.33□□□□□ -2.04
TNFRSF1A-210ENST00000537842 ETV1P50549 477 aa2.33□□□□□ -2.04
TNFRSF1A-210ENST00000537842 CCL11P51671 97 aa2.33□□□□□ -2.04
TNFRSF1A-210ENST00000537842 CCR8P51685 355 aa2.33□□□□□ -2.04
TNFRSF1A-210ENST00000537842 UCP2P55851 309 aa2.33□□□□□ -2.04
TNFRSF1A-210ENST00000537842 AP1S2P56377 157 aa2.33□□□□□ -2.04
TNFRSF1A-210ENST00000537842 ATP6V0D1P61421 351 aa2.33□□□□□ -2.04
TNFRSF1A-210ENST00000537842 ABATP80404 500 aa2.33□□□□□ -2.04
TNFRSF1A-210ENST00000537842 REEP5Q00765 189 aa2.33□□□□□ -2.04
TNFRSF1A-210ENST00000537842 RHAGQ02094 409 aa2.33□□□□□ -2.04
TNFRSF1A-210ENST00000537842 CDC20Q12834 499 aa2.33□□□□□ -2.04
TNFRSF1A-210ENST00000537842 TRAF3Q13114 568 aa2.33□□□□□ -2.04
TNFRSF1A-210ENST00000537842 MAD2L1Q13257 205 aaPredicted RBP2.33□□□□□ -2.04
TNFRSF1A-210ENST00000537842 TNK1Q13470 666 aa2.33□□□□□ -2.04
TNFRSF1A-210ENST00000537842 NAB1Q13506 487 aa2.33□□□□□ -2.04
TNFRSF1A-210ENST00000537842 PDE7AQ13946 482 aa2.33□□□□□ -2.04
TNFRSF1A-210ENST00000537842 IL18Q14116 193 aa2.33□□□□□ -2.04
TNFRSF1A-210ENST00000537842 FAM53BQ14153 422 aa2.33□□□□□ -2.04
TNFRSF1A-210ENST00000537842 SQLEQ14534 574 aa2.33□□□□□ -2.04
TNFRSF1A-210ENST00000537842 RBBP5Q15291 538 aaKnown RBP2.33□□□□□ -2.04
TNFRSF1A-210ENST00000537842 TMED2Q15363 201 aa2.33□□□□□ -2.04
TNFRSF1A-210ENST00000537842 IGFBP7Q16270 282 aa2.33□□□□□ -2.04
TNFRSF1A-210ENST00000537842 ACKR1Q16570 336 aa2.33□□□□□ -2.04
TNFRSF1A-210ENST00000537842 MEP1AQ16819 746 aa2.33□□□□□ -2.04
TNFRSF1A-210ENST00000537842 ADPRMQ3LIE5 342 aa2.33□□□□□ -2.04
TNFRSF1A-210ENST00000537842 TTLL9Q3SXZ7 439 aa2.33□□□□□ -2.04
TNFRSF1A-210ENST00000537842 UGT3A2Q3SY77 523 aa2.33□□□□□ -2.04
TNFRSF1A-210ENST00000537842 DEFB134Q4QY38 66 aa2.33□□□□□ -2.04
TNFRSF1A-210ENST00000537842 PRR30Q53SZ7 412 aaPredicted RBP2.33□□□□□ -2.04
TNFRSF1A-210ENST00000537842 ALG10Q5BKT4 473 aa2.33□□□□□ -2.04
TNFRSF1A-210ENST00000537842 ALG10BQ5I7T1 473 aa2.33□□□□□ -2.04
TNFRSF1A-210ENST00000537842 CXorf66Q5JRM2 361 aaPredicted RBP2.33□□□□□ -2.04
TNFRSF1A-210ENST00000537842 CEP78Q5JTW2 689 aa2.33□□□□□ -2.04
TNFRSF1A-210ENST00000537842 BEND6Q5SZJ8 279 aaPredicted RBP2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms