RNA–Protein interactions for RNA: ENST00000537178.5

CLIP1-209, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLIP1, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-209ENST00000537178 MMP12P39900 470 aa9.95□□□□□ -0.82
CLIP1-209ENST00000537178 UBE2KP61086 200 aa9.95□□□□□ -0.82
CLIP1-209ENST00000537178 MLLT11Q13015 90 aaPredicted RBP9.95□□□□□ -0.82
CLIP1-209ENST00000537178 RUNX2Q13950 521 aa9.95□□□□□ -0.82
CLIP1-209ENST00000537178 POU4F3Q15319 338 aa9.95□□□□□ -0.82
CLIP1-209ENST00000537178 TBCEQ15813 527 aaPredicted RBP9.95□□□□□ -0.82
CLIP1-209ENST00000537178 PM20D1Q6GTS8 502 aa9.95□□□□□ -0.82
CLIP1-209ENST00000537178 SBSNQ6UWP8 590 aa9.95□□□□□ -0.82
CLIP1-209ENST00000537178 ZNF765Q7L2R6 523 aa9.95□□□□□ -0.82
CLIP1-209ENST00000537178 PIWIL3Q7Z3Z3 882 aaKnown RBP9.95□□□□□ -0.82
CLIP1-209ENST00000537178 PRR22Q8IZ63 422 aa9.95□□□□□ -0.82
CLIP1-209ENST00000537178 ADGRG5Q8IZF4 528 aa9.95□□□□□ -0.82
CLIP1-209ENST00000537178 NPWQ8N729 165 aa9.95□□□□□ -0.82
CLIP1-209ENST00000537178 UBL7Q96S82 380 aaPredicted RBP9.95□□□□□ -0.82
CLIP1-209ENST00000537178 SLC29A1Q99808 456 aa9.95□□□□□ -0.82
CLIP1-209ENST00000537178 C16orf70Q9BSU1 422 aa9.95□□□□□ -0.82
CLIP1-209ENST00000537178 ULBP2Q9BZM5 246 aa9.95□□□□□ -0.82
CLIP1-209ENST00000537178 GSTO2Q9H4Y5 243 aa9.95□□□□□ -0.82
CLIP1-209ENST00000537178 OCEL1Q9H607 264 aa9.95□□□□□ -0.82
CLIP1-209ENST00000537178 FAM212BQ9NTI7 297 aaPredicted RBP9.95□□□□□ -0.82
CLIP1-209ENST00000537178 CPNE7Q9UBL6 633 aa9.95□□□□□ -0.82
CLIP1-209ENST00000537178 BLACEA4D250 179 aa9.95□□□□□ -0.82
CLIP1-209ENST00000537178 AGAP14A8MT82 685 aa9.95□□□□□ -0.82
CLIP1-209ENST00000537178 PRAMEF26H0Y7S4 382 aa9.95□□□□□ -0.82
CLIP1-209ENST00000537178 GPR39O43194 453 aa9.95□□□□□ -0.82
CLIP1-209ENST00000537178 CSF2RAP15509 400 aa9.95□□□□□ -0.82
CLIP1-209ENST00000537178 BCKDHBP21953 392 aa9.95□□□□□ -0.82
CLIP1-209ENST00000537178 PTGER4P35408 488 aa9.95□□□□□ -0.82
CLIP1-209ENST00000537178 XCR1P46094 333 aa9.95□□□□□ -0.82
CLIP1-209ENST00000537178 SFRP5Q5T4F7 317 aa9.95□□□□□ -0.82
CLIP1-209ENST00000537178 WBP2NLQ6ICG8 309 aa9.95□□□□□ -0.82
CLIP1-209ENST00000537178 ZNF761Q86XN6 746 aaPredicted RBP9.95□□□□□ -0.82
CLIP1-209ENST00000537178 CLEC1AQ8NC01 280 aa9.95□□□□□ -0.82
CLIP1-209ENST00000537178 KCTD12Q96CX2 325 aaKnown RBP9.95□□□□□ -0.82
CLIP1-209ENST00000537178 OCSTAMPQ9BR26 566 aa9.95□□□□□ -0.82
CLIP1-209ENST00000537178 METTL9Q9H1A3 318 aa9.95□□□□□ -0.82
CLIP1-209ENST00000537178 GORASP2Q9H8Y8 452 aa9.95□□□□□ -0.82
CLIP1-209ENST00000537178 LIN7BQ9HAP6 207 aa9.95□□□□□ -0.82
CLIP1-209ENST00000537178 VAPAQ9P0L0 249 aa9.95□□□□□ -0.82
CLIP1-209ENST00000537178 C17orf112F2Z3M2 114 aa9.95□□□□□ -0.82
CLIP1-209ENST00000537178 K7EPK0 472 aa9.95□□□□□ -0.82
CLIP1-209ENST00000537178 FZD9O00144 591 aa9.95□□□□□ -0.82
CLIP1-209ENST00000537178 SGCEO43556 437 aa9.95□□□□□ -0.82
CLIP1-209ENST00000537178 MED6O75586 246 aa9.95□□□□□ -0.82
CLIP1-209ENST00000537178 RPS17P08708 135 aaKnown RBP9.95□□□□□ -0.82
CLIP1-209ENST00000537178 LIPCP11150 499 aa9.95□□□□□ -0.82
CLIP1-209ENST00000537178 CRHBPP24387 322 aa9.95□□□□□ -0.82
CLIP1-209ENST00000537178 GALEQ14376 348 aa9.95□□□□□ -0.82
CLIP1-209ENST00000537178 NUMA1Q14980 2115 aa9.95□□□□□ -0.82
CLIP1-209ENST00000537178 OPN5Q6U736 354 aa9.95□□□□□ -0.82
CLIP1-209ENST00000537178 FAM71E2Q8N5Q1 922 aa9.95□□□□□ -0.82
CLIP1-209ENST00000537178 TMEM163Q8TC26 289 aa9.95□□□□□ -0.82
CLIP1-209ENST00000537178 TMIGD2Q96BF3 282 aa9.95□□□□□ -0.82
CLIP1-209ENST00000537178 PRR11Q96HE9 360 aaPredicted RBP9.95□□□□□ -0.82
CLIP1-209ENST00000537178 OBP2BQ9NPH6 170 aa9.95□□□□□ -0.82
CLIP1-209ENST00000537178 MYO9BQ13459 2157 aa9.95□□□□□ -0.82
CLIP1-209ENST00000537178 FBXO24O75426 580 aa9.95□□□□□ -0.82
CLIP1-209ENST00000537178 ITGAMP11215 1152 aa9.95□□□□□ -0.82
CLIP1-209ENST00000537178 SERPINA2P20848 420 aa9.95□□□□□ -0.82
CLIP1-209ENST00000537178 MAGEB1P43366 347 aa9.95□□□□□ -0.82
CLIP1-209ENST00000537178 DCAF7P61962 342 aa9.95□□□□□ -0.82
CLIP1-209ENST00000537178 LTBQ06643 244 aa9.95□□□□□ -0.82
CLIP1-209ENST00000537178 SPOCK1Q08629 439 aa9.95□□□□□ -0.82
CLIP1-209ENST00000537178 RTP2Q5QGT7 225 aa9.95□□□□□ -0.82
CLIP1-209ENST00000537178 FAM180BQ6P0A1 224 aa9.95□□□□□ -0.82
CLIP1-209ENST00000537178 GLB1L2Q8IW92 636 aa9.95□□□□□ -0.82
CLIP1-209ENST00000537178 MFSD6LQ8IWD5 586 aa9.95□□□□□ -0.82
CLIP1-209ENST00000537178 ST7LQ8TDW4 575 aa9.95□□□□□ -0.82
CLIP1-209ENST00000537178 TFAP2CQ92754 450 aa9.95□□□□□ -0.82
CLIP1-209ENST00000537178 ZNF75AQ96N20 296 aa9.95□□□□□ -0.82
CLIP1-209ENST00000537178 APOOQ9BUR5 198 aa9.95□□□□□ -0.82
CLIP1-209ENST00000537178 IL23AQ9NPF7 189 aa9.95□□□□□ -0.82
CLIP1-209ENST00000537178 NGBQ9NPG2 151 aa9.95□□□□□ -0.82
CLIP1-209ENST00000537178 UBQLN4Q9NRR5 601 aa9.95□□□□□ -0.82
CLIP1-209ENST00000537178 GFOD1Q9NXC2 390 aa9.95□□□□□ -0.82
CLIP1-209ENST00000537178 CA14Q9ULX7 337 aa9.95□□□□□ -0.82
CLIP1-209ENST00000537178 PTRH2Q9Y3E5 179 aaKnown RBP9.95□□□□□ -0.82
CLIP1-209ENST00000537178 NPIPA5A0A0B4J1W7 369 aa9.94□□□□□ -0.82
CLIP1-209ENST00000537178 NPIPA7E9PJI5 369 aa9.94□□□□□ -0.82
CLIP1-209ENST00000537178 NPIPA8P0DM63 369 aa9.94□□□□□ -0.82
CLIP1-209ENST00000537178 PRPH2P23942 346 aa9.94□□□□□ -0.82
CLIP1-209ENST00000537178 INHBCP55103 352 aa9.94□□□□□ -0.82
CLIP1-209ENST00000537178 RPL22L1Q6P5R6 122 aaKnown RBP9.94□□□□□ -0.82
CLIP1-209ENST00000537178 ADOQ96SZ5 270 aa9.94□□□□□ -0.82
CLIP1-209ENST00000537178 SLC19A3Q9BZV2 496 aa9.94□□□□□ -0.82
CLIP1-209ENST00000537178 A8MVM7 634 aa9.94□□□□□ -0.82
CLIP1-209ENST00000537178 HPGDSO60760 199 aa9.94□□□□□ -0.82
CLIP1-209ENST00000537178 KCNK2O95069 426 aa9.94□□□□□ -0.82
CLIP1-209ENST00000537178 MT-ND4P03905 459 aa9.94□□□□□ -0.82
CLIP1-209ENST00000537178 ACPPP15309 386 aa9.94□□□□□ -0.82
CLIP1-209ENST00000537178 GDF1P27539 372 aa9.94□□□□□ -0.82
CLIP1-209ENST00000537178 HMGN3Q15651 99 aa9.94□□□□□ -0.82
CLIP1-209ENST00000537178 MOB3CQ70IA8 216 aa9.94□□□□□ -0.82
CLIP1-209ENST00000537178 OR56B1Q8NGI3 324 aa9.94□□□□□ -0.82
CLIP1-209ENST00000537178 MZB1Q8WU39 189 aa9.94□□□□□ -0.82
CLIP1-209ENST00000537178 CHTF18Q8WVB6 975 aa9.94□□□□□ -0.82
CLIP1-209ENST00000537178 PIGCQ92535 297 aa9.94□□□□□ -0.82
CLIP1-209ENST00000537178 NTMT1Q9BV86 223 aa9.94□□□□□ -0.82
CLIP1-209ENST00000537178 ZFAND5O76080 213 aa9.94□□□□□ -0.82
CLIP1-209ENST00000537178 ITGBL1O95965 494 aaPredicted RBP9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms