RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 THBDP07204 575 aa11.06□□□□□ -0.64
PRKDC-207ENST00000536483 PPP3CBP16298 524 aa11.06□□□□□ -0.64
PRKDC-207ENST00000536483 IL7RP16871 459 aa11.06□□□□□ -0.64
PRKDC-207ENST00000536483 GPX2P18283 190 aa11.06□□□□□ -0.64
PRKDC-207ENST00000536483 PSMB1P20618 241 aaKnown RBP11.06□□□□□ -0.64
PRKDC-207ENST00000536483 PPIBP23284 216 aaKnown RBP11.06□□□□□ -0.64
PRKDC-207ENST00000536483 AGTR1P30556 359 aa11.06□□□□□ -0.64
PRKDC-207ENST00000536483 SLC1A3P43003 542 aa11.06□□□□□ -0.64
PRKDC-207ENST00000536483 CRATP43155 626 aa11.06□□□□□ -0.64
PRKDC-207ENST00000536483 CTBP2P56545 445 aa11.06□□□□□ -0.64
PRKDC-207ENST00000536483 DSTNP60981 165 aa11.06□□□□□ -0.64
PRKDC-207ENST00000536483 MERTKQ12866 999 aa11.06□□□□□ -0.64
PRKDC-207ENST00000536483 EPS8Q12929 822 aa11.06□□□□□ -0.64
PRKDC-207ENST00000536483 SQLEQ14534 574 aa11.06□□□□□ -0.64
PRKDC-207ENST00000536483 SYT14P1Q58G82 188 aa11.06□□□□□ -0.64
PRKDC-207ENST00000536483 C6orf10Q5SRN2 563 aa11.06□□□□□ -0.64
PRKDC-207ENST00000536483 PPP4R4Q6NUP7 873 aa11.06□□□□□ -0.64
PRKDC-207ENST00000536483 SLC2A7Q6PXP3 512 aa11.06□□□□□ -0.64
PRKDC-207ENST00000536483 BEND4Q6ZU67 534 aa11.06□□□□□ -0.64
PRKDC-207ENST00000536483 FCRLAQ7L513 359 aa11.06□□□□□ -0.64
PRKDC-207ENST00000536483 PEX5LQ8IYB4 626 aa11.06□□□□□ -0.64
PRKDC-207ENST00000536483 DPP10Q8N608 796 aa11.06□□□□□ -0.64
PRKDC-207ENST00000536483 TMCO5AQ8N6Q1 288 aa11.06□□□□□ -0.64
PRKDC-207ENST00000536483 RFWD2Q8NHY2 731 aa11.06□□□□□ -0.64
PRKDC-207ENST00000536483 PNPT1Q8TCS8 783 aaKnown RBP11.06□□□□□ -0.64
PRKDC-207ENST00000536483 WDR60Q8WVS4 1066 aa11.06□□□□□ -0.64
PRKDC-207ENST00000536483 AURKBQ96GD4 344 aaPredicted RBP11.06□□□□□ -0.64
PRKDC-207ENST00000536483 REXO5Q96IC2 774 aaKnown RBP11.06□□□□□ -0.64
PRKDC-207ENST00000536483 SLAMF8Q9P0V8 285 aa11.06□□□□□ -0.64
PRKDC-207ENST00000536483 CHRNA9Q9UGM1 479 aa11.06□□□□□ -0.64
PRKDC-207ENST00000536483 CLEC4AQ9UMR7 237 aa11.06□□□□□ -0.64
PRKDC-207ENST00000536483 SPIN1Q9Y657 262 aaPredicted RBP11.06□□□□□ -0.64
PRKDC-207ENST00000536483 RAI1Q7Z5J4 1906 aaPredicted RBP11.05□□□□□ -0.64
PRKDC-207ENST00000536483 IGKV3D-15A0A087WSY6 115 aa11.05□□□□□ -0.64
PRKDC-207ENST00000536483 CFAP73A6NFT4 308 aa11.05□□□□□ -0.64
PRKDC-207ENST00000536483 ZNF724A8MTY0 619 aa11.05□□□□□ -0.64
PRKDC-207ENST00000536483 KLF4O43474 513 aa11.05□□□□□ -0.64
PRKDC-207ENST00000536483 PMS2P2O95744 297 aa11.05□□□□□ -0.64
PRKDC-207ENST00000536483 PLGP00747 810 aaPredicted RBP11.05□□□□□ -0.64
PRKDC-207ENST00000536483 YES1P07947 543 aa11.05□□□□□ -0.64
PRKDC-207ENST00000536483 ETS2P15036 469 aa11.05□□□□□ -0.64
PRKDC-207ENST00000536483 ENPP1P22413 925 aa11.05□□□□□ -0.64
PRKDC-207ENST00000536483 SLC7A1P30825 629 aa11.05□□□□□ -0.64
PRKDC-207ENST00000536483 ACAA2P42765 397 aaKnown RBP11.05□□□□□ -0.64
PRKDC-207ENST00000536483 CCR4P51679 360 aa11.05□□□□□ -0.64
PRKDC-207ENST00000536483 CSNK2A1P68400 391 aaPredicted RBP11.05□□□□□ -0.64
PRKDC-207ENST00000536483 H3F3AP84243 136 aa11.05□□□□□ -0.64
PRKDC-207ENST00000536483 LIN52Q52LA3 116 aa11.05□□□□□ -0.64
PRKDC-207ENST00000536483 BEX5Q5H9J7 111 aa11.05□□□□□ -0.64
PRKDC-207ENST00000536483 PAGE3Q5JUK9 113 aa11.05□□□□□ -0.64
PRKDC-207ENST00000536483 MRPL2Q5T653 305 aaKnown RBP11.05□□□□□ -0.64
PRKDC-207ENST00000536483 GKAP1Q5VSY0 366 aaPredicted RBP11.05□□□□□ -0.64
PRKDC-207ENST00000536483 DLEU7Q6UYE1 221 aa11.05□□□□□ -0.64
PRKDC-207ENST00000536483 STAC2Q6ZMT1 411 aa11.05□□□□□ -0.64
PRKDC-207ENST00000536483 ZNF704Q6ZNC4 412 aaPredicted RBP11.05□□□□□ -0.64
PRKDC-207ENST00000536483 MTDHQ86UE4 582 aaKnown RBP11.05□□□□□ -0.64
PRKDC-207ENST00000536483 OR52P1PQ8NH57 321 aa11.05□□□□□ -0.64
PRKDC-207ENST00000536483 ABHD3Q8WU67 409 aa11.05□□□□□ -0.64
PRKDC-207ENST00000536483 IGFBPL1Q8WX77 278 aa11.05□□□□□ -0.64
PRKDC-207ENST00000536483 ROBO4Q8WZ75 1007 aa11.05□□□□□ -0.64
PRKDC-207ENST00000536483 TMEM19Q96HH6 336 aa11.05□□□□□ -0.64
PRKDC-207ENST00000536483 ZNF317Q96PQ6 595 aaPredicted RBP11.05□□□□□ -0.64
PRKDC-207ENST00000536483 PSD2Q9BQI7 771 aa11.05□□□□□ -0.64
PRKDC-207ENST00000536483 SPATA9Q9BWV2 254 aa11.05□□□□□ -0.64
PRKDC-207ENST00000536483 TMEM38AQ9H6F2 299 aa11.05□□□□□ -0.64
PRKDC-207ENST00000536483 FANCFQ9NPI8 374 aa11.05□□□□□ -0.64
PRKDC-207ENST00000536483 CTPS2Q9NRF8 586 aa11.05□□□□□ -0.64
PRKDC-207ENST00000536483 CCDC167Q9P0B6 97 aa11.05□□□□□ -0.64
PRKDC-207ENST00000536483 KLHL9Q9P2J3 617 aa11.05□□□□□ -0.64
PRKDC-207ENST00000536483 TRIM33Q9UPN9 1127 aa11.05□□□□□ -0.64
PRKDC-207ENST00000536483 GPR52Q9Y2T5 361 aa11.05□□□□□ -0.64
PRKDC-207ENST00000536483 IFT52Q9Y366 437 aa11.05□□□□□ -0.64
PRKDC-207ENST00000536483 CHST2Q9Y4C5 530 aa11.05□□□□□ -0.64
PRKDC-207ENST00000536483 RTTNQ86VV8 2226 aa11.04□□□□□ -0.64
PRKDC-207ENST00000536483 A0A1W2PNR3 127 aa11.04□□□□□ -0.64
PRKDC-207ENST00000536483 TMEM247A6NEH6 219 aa11.04□□□□□ -0.64
PRKDC-207ENST00000536483 SMAD9O15198 467 aaKnown RBP11.04□□□□□ -0.64
PRKDC-207ENST00000536483 GCM2O75603 506 aaPredicted RBP11.04□□□□□ -0.64
PRKDC-207ENST00000536483 CYP7B1O75881 506 aa11.04□□□□□ -0.64
PRKDC-207ENST00000536483 PLAUP00749 431 aa11.04□□□□□ -0.64
PRKDC-207ENST00000536483 BCHEP06276 602 aa11.04□□□□□ -0.64
PRKDC-207ENST00000536483 IDH2P48735 452 aaKnown RBP11.04□□□□□ -0.64
PRKDC-207ENST00000536483 DIO1P49895 249 aa11.04□□□□□ -0.64
PRKDC-207ENST00000536483 POLR2HP52434 150 aaKnown RBP11.04□□□□□ -0.64
PRKDC-207ENST00000536483 SLC16A1P53985 500 aa11.04□□□□□ -0.64
PRKDC-207ENST00000536483 AGKQ53H12 422 aa11.04□□□□□ -0.64
PRKDC-207ENST00000536483 ABLIM2Q6H8Q1 611 aa11.04□□□□□ -0.64
PRKDC-207ENST00000536483 TFAP2EQ6VUC0 442 aa11.04□□□□□ -0.64
PRKDC-207ENST00000536483 DNAJC14Q6Y2X3 702 aaPredicted RBP11.04□□□□□ -0.64
PRKDC-207ENST00000536483 CPLX4Q7Z7G2 160 aa11.04□□□□□ -0.64
PRKDC-207ENST00000536483 STK32CQ86UX6 486 aa11.04□□□□□ -0.64
PRKDC-207ENST00000536483 TUSC5Q8IXB3 177 aa11.04□□□□□ -0.64
PRKDC-207ENST00000536483 GABRG1Q8N1C3 465 aa11.04□□□□□ -0.64
PRKDC-207ENST00000536483 ANKS4BQ8N8V4 417 aa11.04□□□□□ -0.64
PRKDC-207ENST00000536483 ZNF563Q8TA94 476 aa11.04□□□□□ -0.64
PRKDC-207ENST00000536483 BBS10Q8TAM1 723 aa11.04□□□□□ -0.64
PRKDC-207ENST00000536483 TMEM171Q8WVE6 324 aa11.04□□□□□ -0.64
PRKDC-207ENST00000536483 USB1Q9BQ65 265 aaKnown RBP11.04□□□□□ -0.64
PRKDC-207ENST00000536483 HDHD5Q9BXW7 423 aa11.04□□□□□ -0.64
PRKDC-207ENST00000536483 POTEKPQ9BYX7 375 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms