RNA–Protein interactions for RNA: ENST00000536398.5

UBE3B-206, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-206ENST00000536398 HS3ST6Q96QI5 342 aa12.66□□□□□ -0.38
UBE3B-206ENST00000536398 PRR14Q9BWN1 585 aa12.66□□□□□ -0.38
UBE3B-206ENST00000536398 ACTR6Q9GZN1 396 aa12.66□□□□□ -0.38
UBE3B-206ENST00000536398 GP6Q9HCN6 339 aa12.66□□□□□ -0.38
UBE3B-206ENST00000536398 TMEM181Q9P2C4 612 aa12.66□□□□□ -0.38
UBE3B-206ENST00000536398 IFT52Q9Y366 437 aa12.66□□□□□ -0.38
UBE3B-206ENST00000536398 NDUFAF1Q9Y375 327 aa12.66□□□□□ -0.38
UBE3B-206ENST00000536398 HDGFL3Q9Y3E1 203 aa12.66□□□□□ -0.38
UBE3B-206ENST00000536398 FREM1Q5H8C1 2179 aa12.65□□□□□ -0.38
UBE3B-206ENST00000536398 ZNF716A6NP11 495 aa12.65□□□□□ -0.38
UBE3B-206ENST00000536398 ZNF724A8MTY0 619 aa12.65□□□□□ -0.38
UBE3B-206ENST00000536398 EVPLLA8MZ36 301 aa12.65□□□□□ -0.38
UBE3B-206ENST00000536398 FBP2O00757 339 aa12.65□□□□□ -0.38
UBE3B-206ENST00000536398 ZNF208O43345 1280 aa12.65□□□□□ -0.38
UBE3B-206ENST00000536398 VIMP08670 466 aaKnown RBP12.65□□□□□ -0.38
UBE3B-206ENST00000536398 FPR1P21462 350 aa12.65□□□□□ -0.38
UBE3B-206ENST00000536398 PPIBP23284 216 aaKnown RBP12.65□□□□□ -0.38
UBE3B-206ENST00000536398 AQP1P29972 269 aa12.65□□□□□ -0.38
UBE3B-206ENST00000536398 CLK1P49759 484 aaKnown RBP12.65□□□□□ -0.38
UBE3B-206ENST00000536398 ARFIP2P53365 341 aa12.65□□□□□ -0.38
UBE3B-206ENST00000536398 MTPNP58546 118 aa12.65□□□□□ -0.38
UBE3B-206ENST00000536398 SCARB2Q14108 478 aa12.65□□□□□ -0.38
UBE3B-206ENST00000536398 CAPRIN1Q14444 709 aaKnown RBP12.65□□□□□ -0.38
UBE3B-206ENST00000536398 METTL21CQ5VZV1 264 aa12.65□□□□□ -0.38
UBE3B-206ENST00000536398 WBP2NLQ6ICG8 309 aa12.65□□□□□ -0.38
UBE3B-206ENST00000536398 ALKBH2Q6NS38 261 aa12.65□□□□□ -0.38
UBE3B-206ENST00000536398 REEP3Q6NUK4 255 aa12.65□□□□□ -0.38
UBE3B-206ENST00000536398 PTOV1Q86YD1 416 aa12.65□□□□□ -0.38
UBE3B-206ENST00000536398 DPP10Q8N608 796 aa12.65□□□□□ -0.38
UBE3B-206ENST00000536398 C3orf49Q96BT1 292 aa12.65□□□□□ -0.38
UBE3B-206ENST00000536398 S100PBPQ96BU1 408 aa12.65□□□□□ -0.38
UBE3B-206ENST00000536398 DDIT4LQ96D03 193 aa12.65□□□□□ -0.38
UBE3B-206ENST00000536398 ANKRD27Q96NW4 1050 aa12.65□□□□□ -0.38
UBE3B-206ENST00000536398 WFDC6Q9BQY6 131 aa12.65□□□□□ -0.38
UBE3B-206ENST00000536398 SIKE1Q9BRV8 207 aa12.65□□□□□ -0.38
UBE3B-206ENST00000536398 ZNF226Q9NYT6 803 aa12.65□□□□□ -0.38
UBE3B-206ENST00000536398 TRAPPC4Q9Y296 219 aa12.65□□□□□ -0.38
UBE3B-206ENST00000536398 ZNF469Q96JG9 3925 aaPredicted RBP12.65□□□□□ -0.38
UBE3B-206ENST00000536398 PRR14LQ5THK1 2151 aa12.64□□□□□ -0.39
UBE3B-206ENST00000536398 IGKV3D-15A0A087WSY6 115 aa12.64□□□□□ -0.39
UBE3B-206ENST00000536398 ANGPT2O15123 496 aa12.64□□□□□ -0.39
UBE3B-206ENST00000536398 KLF4O43474 513 aa12.64□□□□□ -0.39
UBE3B-206ENST00000536398 ATE1O95260 518 aa12.64□□□□□ -0.39
UBE3B-206ENST00000536398 IGHV3-9P01782 118 aa12.64□□□□□ -0.39
UBE3B-206ENST00000536398 UQCRBP14927 111 aa12.64□□□□□ -0.39
UBE3B-206ENST00000536398 ETS2P15036 469 aa12.64□□□□□ -0.39
UBE3B-206ENST00000536398 PSMB1P20618 241 aaKnown RBP12.64□□□□□ -0.39
UBE3B-206ENST00000536398 CXCR1P25024 350 aa12.64□□□□□ -0.39
UBE3B-206ENST00000536398 FKBP2P26885 142 aaKnown RBP12.64□□□□□ -0.39
UBE3B-206ENST00000536398 OR3A2P47893 321 aa12.64□□□□□ -0.39
UBE3B-206ENST00000536398 COPZ1P61923 177 aa12.64□□□□□ -0.39
UBE3B-206ENST00000536398 H3F3AP84243 136 aa12.64□□□□□ -0.39
UBE3B-206ENST00000536398 NFYCQ13952 458 aa12.64□□□□□ -0.39
UBE3B-206ENST00000536398 CEACAM7Q14002 265 aa12.64□□□□□ -0.39
UBE3B-206ENST00000536398 SFRP5Q5T4F7 317 aa12.64□□□□□ -0.39
UBE3B-206ENST00000536398 PAMR1Q6UXH9 720 aa12.64□□□□□ -0.39
UBE3B-206ENST00000536398 WFDC8Q8IUA0 241 aa12.64□□□□□ -0.39
UBE3B-206ENST00000536398 NINJ1Q92982 152 aa12.64□□□□□ -0.39
UBE3B-206ENST00000536398 CGREF1Q99674 301 aa12.64□□□□□ -0.39
UBE3B-206ENST00000536398 TMEM38AQ9H6F2 299 aa12.64□□□□□ -0.39
UBE3B-206ENST00000536398 CACYBPQ9HB71 228 aaKnown RBP12.64□□□□□ -0.39
UBE3B-206ENST00000536398 GPR52Q9Y2T5 361 aa12.64□□□□□ -0.39
UBE3B-206ENST00000536398 PRRC2AP48634 2157 aaKnown RBP12.64□□□□□ -0.39
UBE3B-206ENST00000536398 LIPT2A6NK58 231 aa12.63□□□□□ -0.39
UBE3B-206ENST00000536398 GOSR1O95249 250 aa12.63□□□□□ -0.39
UBE3B-206ENST00000536398 TROVE2P10155 538 aaKnown RBP eCLIP12.63□□□□□ -0.39
UBE3B-206ENST00000536398 SLC6A2P23975 617 aa12.63□□□□□ -0.39
UBE3B-206ENST00000536398 DNASE1P24855 282 aa12.63□□□□□ -0.39
UBE3B-206ENST00000536398 HTR2AP28223 471 aa12.63□□□□□ -0.39
UBE3B-206ENST00000536398 ADSLP30566 484 aaPredicted RBP12.63□□□□□ -0.39
UBE3B-206ENST00000536398 PRKAR1BP31321 381 aa12.63□□□□□ -0.39
UBE3B-206ENST00000536398 SLC35A1P78382 337 aa12.63□□□□□ -0.39
UBE3B-206ENST00000536398 DMTNQ08495 405 aa12.63□□□□□ -0.39
UBE3B-206ENST00000536398 PDK3Q15120 406 aa12.63□□□□□ -0.39
UBE3B-206ENST00000536398 OR7A5Q15622 319 aa12.63□□□□□ -0.39
UBE3B-206ENST00000536398 GALNT5Q7Z7M9 940 aa12.63□□□□□ -0.39
UBE3B-206ENST00000536398 ATG4DQ86TL0 474 aaPredicted RBP12.63□□□□□ -0.39
UBE3B-206ENST00000536398 TMEM99Q8N816 258 aa12.63□□□□□ -0.39
UBE3B-206ENST00000536398 ZHX1-C8orf76Q96EF9 292 aa12.63□□□□□ -0.39
UBE3B-206ENST00000536398 TACO1Q9BSH4 297 aaKnown RBP12.63□□□□□ -0.39
UBE3B-206ENST00000536398 POTEKPQ9BYX7 375 aa12.63□□□□□ -0.39
UBE3B-206ENST00000536398 PIF1Q9H611 641 aa12.63□□□□□ -0.39
UBE3B-206ENST00000536398 SAR1AQ9NR31 198 aa12.63□□□□□ -0.39
UBE3B-206ENST00000536398 CORO2BQ9UQ03 480 aa12.63□□□□□ -0.39
UBE3B-206ENST00000536398 NOSIPQ9Y314 301 aaKnown RBP12.63□□□□□ -0.39
UBE3B-206ENST00000536398 TMEM229AB2RXF0 380 aa12.62□□□□□ -0.39
UBE3B-206ENST00000536398 DNPH1O43598 174 aa12.62□□□□□ -0.39
UBE3B-206ENST00000536398 TPST2O60704 377 aa12.62□□□□□ -0.39
UBE3B-206ENST00000536398 LYZL6O75951 148 aa12.62□□□□□ -0.39
UBE3B-206ENST00000536398 AKR7A3O95154 331 aa12.62□□□□□ -0.39
UBE3B-206ENST00000536398 PLAUP00749 431 aa12.62□□□□□ -0.39
UBE3B-206ENST00000536398 PPP3CBP16298 524 aa12.62□□□□□ -0.39
UBE3B-206ENST00000536398 IGHV1-2P23083 117 aa12.62□□□□□ -0.39
UBE3B-206ENST00000536398 IDUAP35475 653 aa12.62□□□□□ -0.39
UBE3B-206ENST00000536398 GZMMP51124 257 aa12.62□□□□□ -0.39
UBE3B-206ENST00000536398 SLC16A1P53985 500 aa12.62□□□□□ -0.39
UBE3B-206ENST00000536398 EGR4Q05215 589 aa12.62□□□□□ -0.39
UBE3B-206ENST00000536398 KLF10Q13118 480 aa12.62□□□□□ -0.39
UBE3B-206ENST00000536398 ZSWIM7Q19AV6 140 aa12.62□□□□□ -0.39
UBE3B-206ENST00000536398 HSP90B2PQ58FF3 399 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms