RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 LINC00696Q6ZRV3 163 aa16.94■□□□□ 0.3
SFSWAP-203ENST00000535236 ACBD4Q8NC06 268 aa16.94■□□□□ 0.3
SFSWAP-203ENST00000535236 SIMC1Q8NDZ2 872 aa16.94■□□□□ 0.3
SFSWAP-203ENST00000535236 VN1R2Q8NFZ6 395 aa16.94■□□□□ 0.3
SFSWAP-203ENST00000535236 DUSP19Q8WTR2 217 aa16.94■□□□□ 0.3
SFSWAP-203ENST00000535236 SGK3Q96BR1 496 aa16.94■□□□□ 0.3
SFSWAP-203ENST00000535236 OR51E2Q9H255 320 aa16.94■□□□□ 0.3
SFSWAP-203ENST00000535236 FANCGO15287 622 aa16.94■□□□□ 0.3
SFSWAP-203ENST00000535236 CDK1P06493 297 aa16.94■□□□□ 0.3
SFSWAP-203ENST00000535236 SORT1Q99523 831 aa16.94■□□□□ 0.3
SFSWAP-203ENST00000535236 ZNF576Q9H609 170 aa16.94■□□□□ 0.3
SFSWAP-203ENST00000535236 BABAM2Q9NXR7 383 aa16.94■□□□□ 0.3
SFSWAP-203ENST00000535236 EHFQ9NZC4 300 aa16.94■□□□□ 0.3
SFSWAP-203ENST00000535236 KIF25Q9UIL4 384 aa16.94■□□□□ 0.3
SFSWAP-203ENST00000535236 LHX6Q9UPM6 363 aa16.94■□□□□ 0.3
SFSWAP-203ENST00000535236 MYH2Q9UKX2 1941 aa16.94■□□□□ 0.3
SFSWAP-203ENST00000535236 CACNA1FO60840 1977 aa16.93■□□□□ 0.3
SFSWAP-203ENST00000535236 LIPCP11150 499 aa16.93■□□□□ 0.3
SFSWAP-203ENST00000535236 SIRPAP78324 504 aa16.93■□□□□ 0.3
SFSWAP-203ENST00000535236 OR2A12Q8NGT7 310 aa16.93■□□□□ 0.3
SFSWAP-203ENST00000535236 ZBTB8AQ96BR9 441 aa16.93■□□□□ 0.3
SFSWAP-203ENST00000535236 LIN37Q96GY3 246 aaPredicted RBP16.93■□□□□ 0.3
SFSWAP-203ENST00000535236 TRAPPC2LQ9UL33 140 aa16.93■□□□□ 0.3
SFSWAP-203ENST00000535236 GAPDHSO14556 408 aaPredicted RBP16.93■□□□□ 0.3
SFSWAP-203ENST00000535236 ENSAO43768 121 aaKnown RBP16.93■□□□□ 0.3
SFSWAP-203ENST00000535236 PRKACBP22694 351 aa16.93■□□□□ 0.3
SFSWAP-203ENST00000535236 TRIM61Q5EBN2 209 aa16.93■□□□□ 0.3
SFSWAP-203ENST00000535236 TMEM31Q5JXX7 168 aa16.93■□□□□ 0.3
SFSWAP-203ENST00000535236 C5orf46Q6UWT4 87 aa16.93■□□□□ 0.3
SFSWAP-203ENST00000535236 BBS1Q8NFJ9 593 aa16.93■□□□□ 0.3
SFSWAP-203ENST00000535236 DAZAP1Q96EP5 407 aaKnown RBP16.93■□□□□ 0.3
SFSWAP-203ENST00000535236 PDLIM5Q96HC4 596 aaKnown RBP16.93■□□□□ 0.3
SFSWAP-203ENST00000535236 COQ10AQ96MF6 247 aa16.93■□□□□ 0.3
SFSWAP-203ENST00000535236 ACKR4Q9NPB9 350 aa16.93■□□□□ 0.3
SFSWAP-203ENST00000535236 SPHK1Q9NYA1 384 aa16.93■□□□□ 0.3
SFSWAP-203ENST00000535236 STEAP1Q9UHE8 339 aa16.93■□□□□ 0.3
SFSWAP-203ENST00000535236 GFRA2O00451 464 aa16.93■□□□□ 0.3
SFSWAP-203ENST00000535236 GJB3O75712 270 aa16.93■□□□□ 0.3
SFSWAP-203ENST00000535236 KITLGP21583 273 aa16.93■□□□□ 0.3
SFSWAP-203ENST00000535236 ERVFC1P60507 584 aa16.93■□□□□ 0.3
SFSWAP-203ENST00000535236 SLC36A2Q495M3 483 aa16.93■□□□□ 0.3
SFSWAP-203ENST00000535236 OR52W1Q6IF63 320 aa16.93■□□□□ 0.3
SFSWAP-203ENST00000535236 METAP1DQ6UB28 335 aaPredicted RBP16.93■□□□□ 0.3
SFSWAP-203ENST00000535236 TMEM178AQ8NBL3 297 aa16.93■□□□□ 0.3
SFSWAP-203ENST00000535236 ABHD11Q8NFV4 315 aa16.93■□□□□ 0.3
SFSWAP-203ENST00000535236 MS4A4AQ96JQ5 239 aa16.93■□□□□ 0.3
SFSWAP-203ENST00000535236 ZNF355PQ9NSJ1 428 aa16.93■□□□□ 0.3
SFSWAP-203ENST00000535236 SIDT1Q9NXL6 827 aaKnown RBP16.93■□□□□ 0.3
SFSWAP-203ENST00000535236 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.93■□□□□ 0.3
SFSWAP-203ENST00000535236 TACR3P29371 465 aa16.93■□□□□ 0.3
SFSWAP-203ENST00000535236 MIB2Q96AX9 1013 aa16.93■□□□□ 0.3
SFSWAP-203ENST00000535236 CALHM2Q9HA72 323 aa16.93■□□□□ 0.3
SFSWAP-203ENST00000535236 ARNT2Q9HBZ2 717 aa16.93■□□□□ 0.3
SFSWAP-203ENST00000535236 CNOT2Q9NZN8 540 aaKnown RBP16.93■□□□□ 0.3
SFSWAP-203ENST00000535236 ZNF254O75437 659 aa16.92■□□□□ 0.3
SFSWAP-203ENST00000535236 ITGAMP11215 1152 aa16.92■□□□□ 0.3
SFSWAP-203ENST00000535236 TAS2R19P59542 299 aa16.92■□□□□ 0.3
SFSWAP-203ENST00000535236 LTBQ06643 244 aa16.92■□□□□ 0.3
SFSWAP-203ENST00000535236 CATR1Q13166 79 aa16.92■□□□□ 0.3
SFSWAP-203ENST00000535236 OR51D1Q8NGF3 324 aa16.92■□□□□ 0.3
SFSWAP-203ENST00000535236 RASD1Q9Y272 281 aa16.92■□□□□ 0.3
SFSWAP-203ENST00000535236 FAM208AQ9UK61 1670 aaKnown RBP16.92■□□□□ 0.3
SFSWAP-203ENST00000535236 FCGR2AP12318 317 aa16.92■□□□□ 0.3
SFSWAP-203ENST00000535236 CRHBPP24387 322 aa16.92■□□□□ 0.3
SFSWAP-203ENST00000535236 ZNF92Q03936 586 aa16.92■□□□□ 0.3
SFSWAP-203ENST00000535236 RUNX2Q13950 521 aa16.92■□□□□ 0.3
SFSWAP-203ENST00000535236 ZNF674Q2M3X9 581 aa16.92■□□□□ 0.3
SFSWAP-203ENST00000535236 SFRP5Q5T4F7 317 aa16.92■□□□□ 0.3
SFSWAP-203ENST00000535236 DMBX1Q8NFW5 382 aa16.92■□□□□ 0.3
SFSWAP-203ENST00000535236 SMIM3Q9BZL3 60 aa16.92■□□□□ 0.3
SFSWAP-203ENST00000535236 MMP28Q9H239 520 aa16.92■□□□□ 0.3
SFSWAP-203ENST00000535236 KCND3Q9UK17 655 aa16.92■□□□□ 0.3
SFSWAP-203ENST00000535236 LRRC37A3O60309 1634 aa16.92■□□□□ 0.3
SFSWAP-203ENST00000535236 FGFBP1Q14512 234 aa16.92■□□□□ 0.3
SFSWAP-203ENST00000535236 CLVS2Q5SYC1 327 aa16.92■□□□□ 0.3
SFSWAP-203ENST00000535236 NKAIN2Q5VXU1 208 aa16.92■□□□□ 0.3
SFSWAP-203ENST00000535236 ADGRG5Q8IZF4 528 aa16.92■□□□□ 0.3
SFSWAP-203ENST00000535236 OR13C2Q8NGS9 318 aa16.92■□□□□ 0.3
SFSWAP-203ENST00000535236 ZNF597Q96LX8 424 aa16.92■□□□□ 0.3
SFSWAP-203ENST00000535236 MFFQ9GZY8 342 aa16.92■□□□□ 0.3
SFSWAP-203ENST00000535236 C1orf198Q9H425 327 aa16.92■□□□□ 0.3
SFSWAP-203ENST00000535236 ANKRD19PQ9H560 264 aa16.92■□□□□ 0.3
SFSWAP-203ENST00000535236 DECR2Q9NUI1 292 aa16.92■□□□□ 0.3
SFSWAP-203ENST00000535236 AGPAT2O15120 278 aa16.92■□□□□ 0.3
SFSWAP-203ENST00000535236 DPM1O60762 260 aa16.92■□□□□ 0.3
SFSWAP-203ENST00000535236 DHRS4L1P0CG22 281 aa16.92■□□□□ 0.3
SFSWAP-203ENST00000535236 ACP2P11117 423 aa16.92■□□□□ 0.3
SFSWAP-203ENST00000535236 CHATP28329 748 aa16.92■□□□□ 0.3
SFSWAP-203ENST00000535236 SSTR4P31391 388 aa16.92■□□□□ 0.3
SFSWAP-203ENST00000535236 HBA1P69905 142 aa16.92■□□□□ 0.3
SFSWAP-203ENST00000535236 TAZQ16635 292 aa16.92■□□□□ 0.3
SFSWAP-203ENST00000535236 ZFPM2Q8WW38 1151 aa16.92■□□□□ 0.3
SFSWAP-203ENST00000535236 FUOMA2VDF0 154 aa16.91■□□□□ 0.3
SFSWAP-203ENST00000535236 PRAMEF27A3QJZ7 478 aa16.91■□□□□ 0.3
SFSWAP-203ENST00000535236 OR5K3A6NET4 321 aa16.91■□□□□ 0.3
SFSWAP-203ENST00000535236 H3BNC9 293 aa16.91■□□□□ 0.3
SFSWAP-203ENST00000535236 SORBS2O94875 1100 aaKnown RBP16.91■□□□□ 0.3
SFSWAP-203ENST00000535236 SLC34A2O95436 690 aa16.91■□□□□ 0.3
SFSWAP-203ENST00000535236 TPT1P13693 172 aaKnown RBP16.91■□□□□ 0.3
SFSWAP-203ENST00000535236 CLDN6P56747 220 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms