RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 SPNP16150 400 aa11.24□□□□□ -0.61
SCARB1-204ENST00000535005 PRKACGP22612 351 aa11.24□□□□□ -0.61
SCARB1-204ENST00000535005 AQP1P29972 269 aa11.24□□□□□ -0.61
SCARB1-204ENST00000535005 SLC15A1P46059 708 aa11.24□□□□□ -0.61
SCARB1-204ENST00000535005 RFX3P48380 749 aa11.24□□□□□ -0.61
SCARB1-204ENST00000535005 FBXW4P57775 412 aa11.24□□□□□ -0.61
SCARB1-204ENST00000535005 MRPS15P82914 257 aaKnown RBP11.24□□□□□ -0.61
SCARB1-204ENST00000535005 MAPK14Q16539 360 aa11.24□□□□□ -0.61
SCARB1-204ENST00000535005 ZSWIM7Q19AV6 140 aa11.24□□□□□ -0.61
SCARB1-204ENST00000535005 KLHL26Q53HC5 615 aa11.24□□□□□ -0.61
SCARB1-204ENST00000535005 ZNF468Q5VIY5 522 aaPredicted RBP11.24□□□□□ -0.61
SCARB1-204ENST00000535005 XKRXQ6PP77 449 aa11.24□□□□□ -0.61
SCARB1-204ENST00000535005 OR52P1PQ8NH57 321 aa11.24□□□□□ -0.61
SCARB1-204ENST00000535005 NTNG2Q96CW9 530 aa11.24□□□□□ -0.61
SCARB1-204ENST00000535005 SMAD5Q99717 465 aaKnown RBP11.24□□□□□ -0.61
SCARB1-204ENST00000535005 SH2D2AQ9NP31 389 aa11.24□□□□□ -0.61
SCARB1-204ENST00000535005 HPF1Q9NWY4 346 aa11.24□□□□□ -0.61
SCARB1-204ENST00000535005 ABCG2Q9UNQ0 655 aa11.24□□□□□ -0.61
SCARB1-204ENST00000535005 ZFHX4Q86UP3 3567 aa11.23□□□□□ -0.61
SCARB1-204ENST00000535005 A0A1W2PQD3 144 aa11.23□□□□□ -0.61
SCARB1-204ENST00000535005 TPD52L2O43399 206 aaKnown RBP11.23□□□□□ -0.61
SCARB1-204ENST00000535005 NDUFB5O43674 189 aa11.23□□□□□ -0.61
SCARB1-204ENST00000535005 ICOSLGO75144 302 aa11.23□□□□□ -0.61
SCARB1-204ENST00000535005 WBP4O75554 376 aaKnown RBP11.23□□□□□ -0.61
SCARB1-204ENST00000535005 LCKP06239 509 aa11.23□□□□□ -0.61
SCARB1-204ENST00000535005 GADD45AP24522 165 aa11.23□□□□□ -0.61
SCARB1-204ENST00000535005 LIPAP38571 399 aa11.23□□□□□ -0.61
SCARB1-204ENST00000535005 CD96P40200 585 aa11.23□□□□□ -0.61
SCARB1-204ENST00000535005 ADH7P40394 386 aa11.23□□□□□ -0.61
SCARB1-204ENST00000535005 CYB561P49447 251 aa11.23□□□□□ -0.61
SCARB1-204ENST00000535005 RPP38P78345 283 aaKnown RBP11.23□□□□□ -0.61
SCARB1-204ENST00000535005 NPRL3Q12980 569 aa11.23□□□□□ -0.61
SCARB1-204ENST00000535005 GPR50Q13585 617 aa11.23□□□□□ -0.61
SCARB1-204ENST00000535005 TBR1Q16650 682 aa11.23□□□□□ -0.61
SCARB1-204ENST00000535005 IL20RBQ6UXL0 311 aa11.23□□□□□ -0.61
SCARB1-204ENST00000535005 RTL4Q6ZR62 310 aa11.23□□□□□ -0.61
SCARB1-204ENST00000535005 AHSA2Q719I0 299 aa11.23□□□□□ -0.61
SCARB1-204ENST00000535005 CBLL1Q75N03 491 aa11.23□□□□□ -0.61
SCARB1-204ENST00000535005 ZNF227Q86WZ6 799 aa11.23□□□□□ -0.61
SCARB1-204ENST00000535005 DEPDC4Q8N2C3 294 aa11.23□□□□□ -0.61
SCARB1-204ENST00000535005 ZNF527Q8NB42 609 aa11.23□□□□□ -0.61
SCARB1-204ENST00000535005 FAM83FQ8NEG4 500 aaPredicted RBP11.23□□□□□ -0.61
SCARB1-204ENST00000535005 PAQR8Q8TEZ7 354 aa11.23□□□□□ -0.61
SCARB1-204ENST00000535005 HAS2Q92819 552 aa11.23□□□□□ -0.61
SCARB1-204ENST00000535005 UTP23Q9BRU9 249 aaKnown RBP11.23□□□□□ -0.61
SCARB1-204ENST00000535005 RSPO3Q9BXY4 272 aaPredicted RBP11.23□□□□□ -0.61
SCARB1-204ENST00000535005 REEP1Q9H902 201 aa11.23□□□□□ -0.61
SCARB1-204ENST00000535005 VNN3Q9NY84 501 aa11.23□□□□□ -0.61
SCARB1-204ENST00000535005 NPIPA5A0A0B4J1W7 369 aa11.23□□□□□ -0.61
SCARB1-204ENST00000535005 CENPVL1A0A0U1RR11 272 aa11.23□□□□□ -0.61
SCARB1-204ENST00000535005 CLCA1A8K7I4 914 aa11.23□□□□□ -0.61
SCARB1-204ENST00000535005 TMEM229AB2RXF0 380 aa11.23□□□□□ -0.61
SCARB1-204ENST00000535005 ALG1L2C9J202 215 aa11.23□□□□□ -0.61
SCARB1-204ENST00000535005 NPIPA7E9PJI5 369 aa11.23□□□□□ -0.61
SCARB1-204ENST00000535005 M0R082 166 aa11.23□□□□□ -0.61
SCARB1-204ENST00000535005 ADAM10O14672 748 aa11.23□□□□□ -0.61
SCARB1-204ENST00000535005 TRIM3O75382 744 aaPredicted RBP11.23□□□□□ -0.61
SCARB1-204ENST00000535005 WDPCPO95876 746 aa11.23□□□□□ -0.61
SCARB1-204ENST00000535005 YES1P07947 543 aa11.23□□□□□ -0.61
SCARB1-204ENST00000535005 NPIPA8P0DM63 369 aa11.23□□□□□ -0.61
SCARB1-204ENST00000535005 NID1P14543 1247 aa11.23□□□□□ -0.61
SCARB1-204ENST00000535005 ENDOUP21128 410 aaKnown RBP11.23□□□□□ -0.61
SCARB1-204ENST00000535005 PRKAR1BP31321 381 aa11.23□□□□□ -0.61
SCARB1-204ENST00000535005 CASRP41180 1078 aa11.23□□□□□ -0.61
SCARB1-204ENST00000535005 KCNJ5P48544 419 aa11.23□□□□□ -0.61
SCARB1-204ENST00000535005 SELENOWP63302 87 aa11.23□□□□□ -0.61
SCARB1-204ENST00000535005 RIPPLY1Q0D2K3 151 aa11.23□□□□□ -0.61
SCARB1-204ENST00000535005 SNTA1Q13424 505 aa11.23□□□□□ -0.61
SCARB1-204ENST00000535005 LARS2Q15031 903 aaKnown RBP11.23□□□□□ -0.61
SCARB1-204ENST00000535005 FNDC7Q5VTL7 733 aa11.23□□□□□ -0.61
SCARB1-204ENST00000535005 ANKRD34AQ69YU3 496 aa11.23□□□□□ -0.61
SCARB1-204ENST00000535005 GDPGP1Q6ZNW5 385 aa11.23□□□□□ -0.61
SCARB1-204ENST00000535005 LINC00696Q6ZRV3 163 aa11.23□□□□□ -0.61
SCARB1-204ENST00000535005 EIF3MQ7L2H7 374 aaKnown RBP11.23□□□□□ -0.61
SCARB1-204ENST00000535005 GALNT5Q7Z7M9 940 aa11.23□□□□□ -0.61
SCARB1-204ENST00000535005 CMIPQ8IY22 773 aa11.23□□□□□ -0.61
SCARB1-204ENST00000535005 CYP4Z2PQ8N1L4 340 aa11.23□□□□□ -0.61
SCARB1-204ENST00000535005 POGLUT1Q8NBL1 392 aa11.23□□□□□ -0.61
SCARB1-204ENST00000535005 OR10G3Q8NGC4 313 aa11.23□□□□□ -0.61
SCARB1-204ENST00000535005 SLC30A2Q9BRI3 323 aa11.23□□□□□ -0.61
SCARB1-204ENST00000535005 PINK1Q9BXM7 581 aa11.23□□□□□ -0.61
SCARB1-204ENST00000535005 GON7Q9BXV9 100 aa11.23□□□□□ -0.61
SCARB1-204ENST00000535005 QRSL1Q9H0R6 528 aaKnown RBP11.23□□□□□ -0.61
SCARB1-204ENST00000535005 CACYBPQ9HB71 228 aaKnown RBP11.23□□□□□ -0.61
SCARB1-204ENST00000535005 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.23□□□□□ -0.61
SCARB1-204ENST00000535005 ADPRHL2Q9NX46 363 aa11.23□□□□□ -0.61
SCARB1-204ENST00000535005 FLRT3Q9NZU0 649 aa11.23□□□□□ -0.61
SCARB1-204ENST00000535005 CNIH4Q9P003 139 aa11.23□□□□□ -0.61
SCARB1-204ENST00000535005 PDP1Q9P0J1 537 aaPredicted RBP11.23□□□□□ -0.61
SCARB1-204ENST00000535005 SEC14L3Q9UDX4 400 aa11.23□□□□□ -0.61
SCARB1-204ENST00000535005 ENOPH1Q9UHY7 261 aa11.23□□□□□ -0.61
SCARB1-204ENST00000535005 CAB39Q9Y376 341 aaPredicted RBP11.23□□□□□ -0.61
SCARB1-204ENST00000535005 PCDHGB7Q9Y5F8 929 aa11.23□□□□□ -0.61
SCARB1-204ENST00000535005 CHCHD2Q9Y6H1 151 aaPredicted RBP11.23□□□□□ -0.61
SCARB1-204ENST00000535005 CPAMD8Q8IZJ3 1885 aa11.23□□□□□ -0.61
SCARB1-204ENST00000535005 TPRP12270 2363 aaKnown RBP11.23□□□□□ -0.61
SCARB1-204ENST00000535005 CFAP47Q6ZTR5 3102 aa11.22□□□□□ -0.61
SCARB1-204ENST00000535005 OR5H15A6NDH6 313 aa11.22□□□□□ -0.61
SCARB1-204ENST00000535005 SERINC4A6NH21 518 aa11.22□□□□□ -0.61
SCARB1-204ENST00000535005 SYT5O00445 386 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms