RNA–Protein interactions for RNA: ENST00000534716.2

NDUFS3-213, Transcript of NADH:ubiquinone oxidoreductase core subunit S3, humanhuman

TSL 2 BASIC

Gene NDUFS3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3-213ENST00000534716 HMGN2P46Q86SG4 172 aa16.62■□□□□ 0.25
NDUFS3-213ENST00000534716 ATG4DQ86TL0 474 aaPredicted RBP16.62■□□□□ 0.25
NDUFS3-213ENST00000534716 ZNF440Q8IYI8 595 aa16.62■□□□□ 0.25
NDUFS3-213ENST00000534716 SMAP2Q8WU79 429 aaPredicted RBP16.62■□□□□ 0.25
NDUFS3-213ENST00000534716 WDR60Q8WVS4 1066 aa16.62■□□□□ 0.25
NDUFS3-213ENST00000534716 ZBTB9Q96C00 473 aa16.62■□□□□ 0.25
NDUFS3-213ENST00000534716 TLCD1Q96CP7 247 aa16.62■□□□□ 0.25
NDUFS3-213ENST00000534716 DDIT4LQ96D03 193 aa16.62■□□□□ 0.25
NDUFS3-213ENST00000534716 MUCL1Q96DR8 90 aa16.62■□□□□ 0.25
NDUFS3-213ENST00000534716 OR11A1Q9GZK7 315 aa16.62■□□□□ 0.25
NDUFS3-213ENST00000534716 ADAM19Q9H013 955 aa16.62■□□□□ 0.25
NDUFS3-213ENST00000534716 MANSC1Q9H8J5 431 aa16.62■□□□□ 0.25
NDUFS3-213ENST00000534716 SDR39U1Q9NRG7 319 aaPredicted RBP16.62■□□□□ 0.25
NDUFS3-213ENST00000534716 SLC6A13Q9NSD5 602 aa16.62■□□□□ 0.25
NDUFS3-213ENST00000534716 ZIM2Q9NZV7 527 aa16.62■□□□□ 0.25
NDUFS3-213ENST00000534716 MALT1Q9UDY8 824 aa16.62■□□□□ 0.25
NDUFS3-213ENST00000534716 TMED7Q9Y3B3 224 aa16.62■□□□□ 0.25
NDUFS3-213ENST00000534716 KLF11O14901 512 aa16.61■□□□□ 0.25
NDUFS3-213ENST00000534716 KITP10721 976 aa16.61■□□□□ 0.25
NDUFS3-213ENST00000534716 UQCRBP14927 111 aa16.61■□□□□ 0.25
NDUFS3-213ENST00000534716 SLC35A1P78382 337 aa16.61■□□□□ 0.25
NDUFS3-213ENST00000534716 EPS8Q12929 822 aa16.61■□□□□ 0.25
NDUFS3-213ENST00000534716 STK11Q15831 433 aa16.61■□□□□ 0.25
NDUFS3-213ENST00000534716 MRPL2Q5T653 305 aaKnown RBP16.61■□□□□ 0.25
NDUFS3-213ENST00000534716 APH1AQ96BI3 265 aa16.61■□□□□ 0.25
NDUFS3-213ENST00000534716 RADILQ96JH8 1075 aa16.61■□□□□ 0.25
NDUFS3-213ENST00000534716 ASB6Q9NWX5 421 aa16.61■□□□□ 0.25
NDUFS3-213ENST00000534716 P2RX2Q9UBL9 471 aa16.61■□□□□ 0.25
NDUFS3-213ENST00000534716 FBN3Q75N90 2809 aa16.6■□□□□ 0.25
NDUFS3-213ENST00000534716 TMEM72A0PK05 275 aa16.6■□□□□ 0.25
NDUFS3-213ENST00000534716 CDHR4A6H8M9 788 aa16.6■□□□□ 0.25
NDUFS3-213ENST00000534716 MRPL33O75394 65 aaKnown RBP16.6■□□□□ 0.25
NDUFS3-213ENST00000534716 TFPTP0C1Z6 253 aa16.6■□□□□ 0.25
NDUFS3-213ENST00000534716 IMPDH2P12268 514 aa16.6■□□□□ 0.25
NDUFS3-213ENST00000534716 TACR3P29371 465 aa16.6■□□□□ 0.25
NDUFS3-213ENST00000534716 OR2B6P58173 313 aa16.6■□□□□ 0.25
NDUFS3-213ENST00000534716 MAGOHP61326 146 aaKnown RBP16.6■□□□□ 0.25
NDUFS3-213ENST00000534716 ZSWIM7Q19AV6 140 aa16.6■□□□□ 0.25
NDUFS3-213ENST00000534716 PGGHGQ32M88 737 aa16.6■□□□□ 0.25
NDUFS3-213ENST00000534716 SLC9B1Q4ZJI4 515 aa16.6■□□□□ 0.25
NDUFS3-213ENST00000534716 NXNQ6DKJ4 435 aa16.6■□□□□ 0.25
NDUFS3-213ENST00000534716 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.6■□□□□ 0.25
NDUFS3-213ENST00000534716 MAVSQ7Z434 540 aa16.6■□□□□ 0.25
NDUFS3-213ENST00000534716 CCDC103Q8IW40 242 aa16.6■□□□□ 0.25
NDUFS3-213ENST00000534716 PEX5LQ8IYB4 626 aa16.6■□□□□ 0.25
NDUFS3-213ENST00000534716 PNPT1Q8TCS8 783 aaKnown RBP16.6■□□□□ 0.25
NDUFS3-213ENST00000534716 MGARPQ8TDB4 240 aa16.6■□□□□ 0.25
NDUFS3-213ENST00000534716 NEUROG1Q92886 237 aa16.6■□□□□ 0.25
NDUFS3-213ENST00000534716 TRMT61AQ96FX7 289 aaKnown RBP16.6■□□□□ 0.25
NDUFS3-213ENST00000534716 MUS81Q96NY9 551 aa16.6■□□□□ 0.25
NDUFS3-213ENST00000534716 THUMPD1Q9NXG2 353 aaKnown RBP16.6■□□□□ 0.25
NDUFS3-213ENST00000534716 NKIRAS1Q9NYS0 192 aa16.6■□□□□ 0.25
NDUFS3-213ENST00000534716 NPAP1Q9NZP6 1156 aa16.6■□□□□ 0.25
NDUFS3-213ENST00000534716 CALML5Q9NZT1 146 aa16.6■□□□□ 0.25
NDUFS3-213ENST00000534716 SHISA9B4DS77 424 aa16.59■□□□□ 0.25
NDUFS3-213ENST00000534716 PDLIM1O00151 329 aa16.59■□□□□ 0.25
NDUFS3-213ENST00000534716 SMAD7O15105 426 aaKnown RBP16.59■□□□□ 0.25
NDUFS3-213ENST00000534716 RAMP1O60894 148 aa16.59■□□□□ 0.25
NDUFS3-213ENST00000534716 SLC17A1Q14916 467 aa16.59■□□□□ 0.25
NDUFS3-213ENST00000534716 LIN52Q52LA3 116 aa16.59■□□□□ 0.25
NDUFS3-213ENST00000534716 C1QTNF12Q5T7M4 302 aa16.59■□□□□ 0.25
NDUFS3-213ENST00000534716 PAQR6Q6TCH4 344 aa16.59■□□□□ 0.25
NDUFS3-213ENST00000534716 DTX2Q86UW9 622 aa16.59■□□□□ 0.25
NDUFS3-213ENST00000534716 KBTBD8Q8NFY9 601 aa16.59■□□□□ 0.25
NDUFS3-213ENST00000534716 NAA11Q9BSU3 229 aaPredicted RBP16.59■□□□□ 0.25
NDUFS3-213ENST00000534716 RMND5AQ9H871 391 aa16.59■□□□□ 0.25
NDUFS3-213ENST00000534716 TPT1P8Q9HAU6 139 aa16.59■□□□□ 0.25
NDUFS3-213ENST00000534716 TMBIM4Q9HC24 238 aa16.59■□□□□ 0.25
NDUFS3-213ENST00000534716 PARPBPQ9NWS1 579 aa16.59■□□□□ 0.25
NDUFS3-213ENST00000534716 TAS2R16Q9NYV7 291 aa16.59■□□□□ 0.25
NDUFS3-213ENST00000534716 MAGED1Q9Y5V3 778 aaPredicted RBP16.59■□□□□ 0.25
NDUFS3-213ENST00000534716 FREM1Q5H8C1 2179 aa16.59■□□□□ 0.25
NDUFS3-213ENST00000534716 PRR14LQ5THK1 2151 aa16.58■□□□□ 0.25
NDUFS3-213ENST00000534716 FN1P02751 2386 aaKnown RBP16.58■□□□□ 0.25
NDUFS3-213ENST00000534716 UBDO15205 165 aa16.58■□□□□ 0.24
NDUFS3-213ENST00000534716 ETFAP13804 333 aa16.58■□□□□ 0.24
NDUFS3-213ENST00000534716 CCNA2P20248 432 aa16.58■□□□□ 0.24
NDUFS3-213ENST00000534716 ACAA2P42765 397 aaKnown RBP16.58■□□□□ 0.24
NDUFS3-213ENST00000534716 MRPL19P49406 292 aaKnown RBP16.58■□□□□ 0.24
NDUFS3-213ENST00000534716 CRISP3P54108 245 aa16.58■□□□□ 0.24
NDUFS3-213ENST00000534716 RNF220Q5VTB9 566 aa16.58■□□□□ 0.24
NDUFS3-213ENST00000534716 OR7E24Q6IFN5 339 aa16.58■□□□□ 0.24
NDUFS3-213ENST00000534716 UBE2J2Q8N2K1 259 aa16.58■□□□□ 0.24
NDUFS3-213ENST00000534716 SLC38A5Q8WUX1 472 aa16.58■□□□□ 0.24
NDUFS3-213ENST00000534716 ITCHQ96J02 903 aa16.58■□□□□ 0.24
NDUFS3-213ENST00000534716 OR52B2Q96RD2 323 aa16.58■□□□□ 0.24
NDUFS3-213ENST00000534716 TRAF4Q9BUZ4 470 aaPredicted RBP16.58■□□□□ 0.24
NDUFS3-213ENST00000534716 AMBRA1Q9C0C7 1298 aa16.58■□□□□ 0.24
NDUFS3-213ENST00000534716 PIF1Q9H611 641 aa16.58■□□□□ 0.24
NDUFS3-213ENST00000534716 RLIMQ9NVW2 624 aa16.58■□□□□ 0.24
NDUFS3-213ENST00000534716 CISD1Q9NZ45 108 aaKnown RBP16.58■□□□□ 0.24
NDUFS3-213ENST00000534716 DCTN4Q9UJW0 460 aa16.58■□□□□ 0.24
NDUFS3-213ENST00000534716 MGAT4BQ9UQ53 548 aa16.58■□□□□ 0.24
NDUFS3-213ENST00000534716 SLC9A8Q9Y2E8 581 aa16.58■□□□□ 0.24
NDUFS3-213ENST00000534716 FLVCR1Q9Y5Y0 555 aa16.58■□□□□ 0.24
NDUFS3-213ENST00000534716 SLC25A15Q9Y619 301 aa16.58■□□□□ 0.24
NDUFS3-213ENST00000534716 A0A1W2PP18 115 aa16.57■□□□□ 0.24
NDUFS3-213ENST00000534716 ZC3H12DA2A288 527 aaKnown RBP16.57■□□□□ 0.24
NDUFS3-213ENST00000534716 RAD51DO75771 328 aa16.57■□□□□ 0.24
NDUFS3-213ENST00000534716 CD8AP01732 235 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms