RNA–Protein interactions for RNA: ENST00000534705.5

USP48-215, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 566 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-215ENST00000534705 TAF1BQ53T94 588 aaPredicted RBP2.9□□□□□ -1.95
USP48-215ENST00000534705 C6orf183Q5T699 404 aa2.9□□□□□ -1.95
USP48-215ENST00000534705 OR6B2Q6IFH4 312 aa2.9□□□□□ -1.95
USP48-215ENST00000534705 DOK6Q6PKX4 331 aa2.9□□□□□ -1.95
USP48-215ENST00000534705 ZYG11AQ6WRX3 759 aa2.9□□□□□ -1.95
USP48-215ENST00000534705 Q6ZRP5 223 aa2.9□□□□□ -1.95
USP48-215ENST00000534705 CLEC20AQ6ZU45 233 aa2.9□□□□□ -1.95
USP48-215ENST00000534705 FRA10AC1Q70Z53 315 aa2.9□□□□□ -1.95
USP48-215ENST00000534705 TRMT10CQ7L0Y3 403 aaKnown RBP2.9□□□□□ -1.95
USP48-215ENST00000534705 ARPINQ7Z6K5 226 aa2.9□□□□□ -1.95
USP48-215ENST00000534705 DHDDSQ86SQ9 333 aa2.9□□□□□ -1.95
USP48-215ENST00000534705 ACOT1Q86TX2 421 aa2.9□□□□□ -1.95
USP48-215ENST00000534705 VASH2Q86V25 355 aa2.9□□□□□ -1.95
USP48-215ENST00000534705 UNC93AQ86WB7 457 aa2.9□□□□□ -1.95
USP48-215ENST00000534705 ZNF573Q86YE8 665 aa2.9□□□□□ -1.95
USP48-215ENST00000534705 MFSD6LQ8IWD5 586 aa2.9□□□□□ -1.95
USP48-215ENST00000534705 RYBPQ8N488 228 aaPredicted RBP2.9□□□□□ -1.95
USP48-215ENST00000534705 C12orf29Q8N999 325 aa2.9□□□□□ -1.95
USP48-215ENST00000534705 FBXL13Q8NEE6 735 aa2.9□□□□□ -1.95
USP48-215ENST00000534705 OR13C2Q8NGS9 318 aa2.9□□□□□ -1.95
USP48-215ENST00000534705 ZNF420Q8TAQ5 688 aaPredicted RBP2.9□□□□□ -1.95
USP48-215ENST00000534705 APOBEC4Q8WW27 367 aaKnown RBP2.9□□□□□ -1.95
USP48-215ENST00000534705 RASSF5Q8WWW0 418 aa2.9□□□□□ -1.95
USP48-215ENST00000534705 RIT1Q92963 219 aa2.9□□□□□ -1.95
USP48-215ENST00000534705 CLDN23Q96B33 292 aa2.9□□□□□ -1.95
USP48-215ENST00000534705 OTUB1Q96FW1 271 aaPredicted RBP2.9□□□□□ -1.95
USP48-215ENST00000534705 PLEKHA8Q96JA3 519 aa2.9□□□□□ -1.95
USP48-215ENST00000534705 MS4A14Q96JA4 679 aa2.9□□□□□ -1.95
USP48-215ENST00000534705 C18orf12Q96KH6 178 aa2.9□□□□□ -1.95
USP48-215ENST00000534705 CEP19Q96LK0 163 aa2.9□□□□□ -1.95
USP48-215ENST00000534705 SPATA13Q96N96 652 aa2.9□□□□□ -1.95
USP48-215ENST00000534705 PANX3Q96QZ0 392 aa2.9□□□□□ -1.95
USP48-215ENST00000534705 ZNF300Q96RE9 604 aaPredicted RBP2.9□□□□□ -1.95
USP48-215ENST00000534705 CYP2S1Q96SQ9 504 aa2.9□□□□□ -1.95
USP48-215ENST00000534705 LPAR4Q99677 370 aa2.9□□□□□ -1.95
USP48-215ENST00000534705 MAP3K3Q99759 626 aa2.9□□□□□ -1.95
USP48-215ENST00000534705 GPA33Q99795 319 aa2.9□□□□□ -1.95
USP48-215ENST00000534705 UQCC2Q9BRT2 126 aa2.9□□□□□ -1.95
USP48-215ENST00000534705 ZNF416Q9BWM5 594 aa2.9□□□□□ -1.95
USP48-215ENST00000534705 NDEL1Q9GZM8 345 aa2.9□□□□□ -1.95
USP48-215ENST00000534705 TMEM245Q9H330 911 aa2.9□□□□□ -1.95
USP48-215ENST00000534705 MED20Q9H944 212 aa2.9□□□□□ -1.95
USP48-215ENST00000534705 CYP3A43Q9HB55 503 aa2.9□□□□□ -1.95
USP48-215ENST00000534705 ZFP14Q9HCL3 533 aa2.9□□□□□ -1.95
USP48-215ENST00000534705 HPS4Q9NQG7 708 aa2.9□□□□□ -1.95
USP48-215ENST00000534705 HEBP1Q9NRV9 189 aa2.9□□□□□ -1.95
USP48-215ENST00000534705 SLC7A10Q9NS82 523 aa2.9□□□□□ -1.95
USP48-215ENST00000534705 DDX18Q9NVP1 670 aaKnown RBP2.9□□□□□ -1.95
USP48-215ENST00000534705 RAB20Q9NX57 234 aa2.9□□□□□ -1.95
USP48-215ENST00000534705 TAS2R7Q9NYW3 318 aa2.9□□□□□ -1.95
USP48-215ENST00000534705 RSL24D1Q9UHA3 163 aaKnown RBP2.9□□□□□ -1.95
USP48-215ENST00000534705 PCYOX1Q9UHG3 505 aa2.9□□□□□ -1.95
USP48-215ENST00000534705 DNPEPQ9ULA0 475 aa2.9□□□□□ -1.95
USP48-215ENST00000534705 RAB26Q9ULW5 256 aa2.9□□□□□ -1.95
USP48-215ENST00000534705 ERGIC3Q9Y282 383 aa2.9□□□□□ -1.95
USP48-215ENST00000534705 TMED3Q9Y3Q3 217 aa2.9□□□□□ -1.95
USP48-215ENST00000534705 SPACA6W5XKT8 324 aa2.9□□□□□ -1.95
USP48-215ENST00000534705 ZNF106Q9H2Y7 1883 aaKnown RBP2.9□□□□□ -1.95
USP48-215ENST00000534705 PCNX3Q9H6A9 2034 aa2.9□□□□□ -1.95
USP48-215ENST00000534705 GOLGA4Q13439 2230 aaKnown RBP2.89□□□□□ -1.95
USP48-215ENST00000534705 CACNA1AO00555 2505 aa2.89□□□□□ -1.95
USP48-215ENST00000534705 COL5A1P20908 1838 aaPredicted RBP2.89□□□□□ -1.95
USP48-215ENST00000534705 A0A1W2PPW3 197 aa2.89□□□□□ -1.95
USP48-215ENST00000534705 MACROD2A1Z1Q3 448 aa2.89□□□□□ -1.95
USP48-215ENST00000534705 ZNF840PA6NDX5 716 aa2.89□□□□□ -1.95
USP48-215ENST00000534705 SYCE1LA8MT33 242 aa2.89□□□□□ -1.95
USP48-215ENST00000534705 MPTX1A8MV57 137 aa2.89□□□□□ -1.95
USP48-215ENST00000534705 PALM2-AKAP2B1ALY0 433 aaPredicted RBP2.89□□□□□ -1.95
USP48-215ENST00000534705 E9PQ18 207 aa2.89□□□□□ -1.95
USP48-215ENST00000534705 H0Y8G0 127 aa2.89□□□□□ -1.95
USP48-215ENST00000534705 H3BSA7 217 aa2.89□□□□□ -1.95
USP48-215ENST00000534705 L7N2F9 121 aa2.89□□□□□ -1.95
USP48-215ENST00000534705 PGRMC1O00264 195 aaKnown RBP2.89□□□□□ -1.95
USP48-215ENST00000534705 CTDSPLO15194 276 aa2.89□□□□□ -1.95
USP48-215ENST00000534705 CHADO15335 359 aa2.89□□□□□ -1.95
USP48-215ENST00000534705 RGS16O15492 202 aaPredicted RBP2.89□□□□□ -1.95
USP48-215ENST00000534705 FCGR3BO75015 233 aa2.89□□□□□ -1.95
USP48-215ENST00000534705 MTX2O75431 263 aa2.89□□□□□ -1.95
USP48-215ENST00000534705 TM7SF2O76062 418 aa2.89□□□□□ -1.95
USP48-215ENST00000534705 SORBS2O94875 1100 aaKnown RBP2.89□□□□□ -1.95
USP48-215ENST00000534705 CDK14O94921 469 aa2.89□□□□□ -1.95
USP48-215ENST00000534705 MFN2O95140 757 aa2.89□□□□□ -1.95
USP48-215ENST00000534705 TNFAIP8O95379 198 aa2.89□□□□□ -1.95
USP48-215ENST00000534705 FGF19O95750 216 aa2.89□□□□□ -1.95
USP48-215ENST00000534705 CALCAP01258 141 aa2.89□□□□□ -1.95
USP48-215ENST00000534705 S100A6P06703 90 aa2.89□□□□□ -1.95
USP48-215ENST00000534705 CSN3P07498 182 aa2.89□□□□□ -1.95
USP48-215ENST00000534705 ALOX5P09917 674 aa2.89□□□□□ -1.95
USP48-215ENST00000534705 OCM2P0CE71 109 aa2.89□□□□□ -1.95
USP48-215ENST00000534705 OCMP0CE72 109 aaPredicted RBP2.89□□□□□ -1.95
USP48-215ENST00000534705 ZSCAN5DPP0CG00 497 aa2.89□□□□□ -1.95
USP48-215ENST00000534705 CALCBP10092 127 aa2.89□□□□□ -1.95
USP48-215ENST00000534705 CD22P20273 847 aa2.89□□□□□ -1.95
USP48-215ENST00000534705 DCKP27707 260 aa2.89□□□□□ -1.95
USP48-215ENST00000534705 OTX2P32243 289 aa2.89□□□□□ -1.95
USP48-215ENST00000534705 SLC26A3P40879 764 aa2.89□□□□□ -1.95
USP48-215ENST00000534705 OPRD1P41143 372 aa2.89□□□□□ -1.95
USP48-215ENST00000534705 OPRL1P41146 370 aa2.89□□□□□ -1.95
USP48-215ENST00000534705 PPP1R2P41236 205 aa2.89□□□□□ -1.95
USP48-215ENST00000534705 MAGEA1P43355 309 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms