RNA–Protein interactions for RNA: ENST00000534647.1

CTNND1-238, Transcript of catenin delta 1, human

TSL 5

Gene CTNND1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNND1-238	ENST00000534647	CIDEC	Q96AQ7	238 aa	Predicted RBP	10.23	□□□□□ -0.77
CTNND1-238	ENST00000534647	C3orf30	Q96M34	536 aa		10.23	□□□□□ -0.77
CTNND1-238	ENST00000534647	TRAF4	Q9BUZ4	470 aa	Predicted RBP	10.23	□□□□□ -0.77
CTNND1-238	ENST00000534647	SRXN1	Q9BYN0	137 aa		10.23	□□□□□ -0.77
CTNND1-238	ENST00000534647	POTEKP	Q9BYX7	375 aa		10.23	□□□□□ -0.77
CTNND1-238	ENST00000534647	PIGU	Q9H490	435 aa		10.23	□□□□□ -0.77
CTNND1-238	ENST00000534647	TMEM185B	Q9H7F4	350 aa		10.23	□□□□□ -0.77
CTNND1-238	ENST00000534647	NDE1	Q9NXR1	346 aa		10.23	□□□□□ -0.77
CTNND1-238	ENST00000534647	TMED5	Q9Y3A6	229 aa		10.23	□□□□□ -0.77
CTNND1-238	ENST00000534647	MAGED1	Q9Y5V3	778 aa	Predicted RBP	10.23	□□□□□ -0.77
CTNND1-238	ENST00000534647	PRR14L	Q5THK1	2151 aa		10.22	□□□□□ -0.77
CTNND1-238	ENST00000534647		A0A1W2PP18	115 aa		10.22	□□□□□ -0.77
CTNND1-238	ENST00000534647		J3QL48	77 aa		10.22	□□□□□ -0.77
CTNND1-238	ENST00000534647	CLOCK	O15516	846 aa		10.22	□□□□□ -0.77
CTNND1-238	ENST00000534647	TBX1	O43435	398 aa		10.22	□□□□□ -0.77
CTNND1-238	ENST00000534647	PEX11A	O75192	247 aa		10.22	□□□□□ -0.77
CTNND1-238	ENST00000534647	PGM3	O95394	542 aa		10.22	□□□□□ -0.77
CTNND1-238	ENST00000534647	ADA	P00813	363 aa		10.22	□□□□□ -0.77
CTNND1-238	ENST00000534647	IDO1	P14902	403 aa		10.22	□□□□□ -0.77
CTNND1-238	ENST00000534647	DDX5	P17844	614 aa	Known RBP	10.22	□□□□□ -0.77
CTNND1-238	ENST00000534647	SDC1	P18827	310 aa		10.22	□□□□□ -0.77
CTNND1-238	ENST00000534647	SHC1	P29353	583 aa		10.22	□□□□□ -0.77
CTNND1-238	ENST00000534647	SFTPD	P35247	375 aa		10.22	□□□□□ -0.77
CTNND1-238	ENST00000534647	PGM1	P36871	562 aa		10.22	□□□□□ -0.77
CTNND1-238	ENST00000534647	ACVR1B	P36896	505 aa		10.22	□□□□□ -0.77
CTNND1-238	ENST00000534647	ASMT	P46597	345 aa		10.22	□□□□□ -0.77
CTNND1-238	ENST00000534647	OR3A2	P47893	321 aa		10.22	□□□□□ -0.77
CTNND1-238	ENST00000534647	P2RX1	P51575	399 aa		10.22	□□□□□ -0.77
CTNND1-238	ENST00000534647	RAC3	P60763	192 aa		10.22	□□□□□ -0.77
CTNND1-238	ENST00000534647	POU6F2	P78424	691 aa	Predicted RBP	10.22	□□□□□ -0.77
CTNND1-238	ENST00000534647	ZNF117	Q03924	483 aa		10.22	□□□□□ -0.77
CTNND1-238	ENST00000534647	TNP2	Q05952	138 aa		10.22	□□□□□ -0.77
CTNND1-238	ENST00000534647	BSPH1	Q075Z2	132 aa		10.22	□□□□□ -0.77
CTNND1-238	ENST00000534647	FOXF1	Q12946	379 aa		10.22	□□□□□ -0.77
CTNND1-238	ENST00000534647	MAD2L1	Q13257	205 aa	Predicted RBP	10.22	□□□□□ -0.77
CTNND1-238	ENST00000534647	NRF1	Q16656	503 aa		10.22	□□□□□ -0.77
CTNND1-238	ENST00000534647	TMEM176B	Q3YBM2	270 aa	Predicted RBP	10.22	□□□□□ -0.77
CTNND1-238	ENST00000534647	RFTN2	Q52LD8	501 aa	Predicted RBP	10.22	□□□□□ -0.77
CTNND1-238	ENST00000534647	AGK	Q53H12	422 aa		10.22	□□□□□ -0.77
CTNND1-238	ENST00000534647	OGFOD2	Q6N063	350 aa		10.22	□□□□□ -0.77
CTNND1-238	ENST00000534647	ANKRD26P1	Q6NSI1	321 aa		10.22	□□□□□ -0.77
CTNND1-238	ENST00000534647	R3HCC1L	Q7Z5L2	792 aa	Known RBP	10.22	□□□□□ -0.77
CTNND1-238	ENST00000534647	SNX32	Q86XE0	403 aa		10.22	□□□□□ -0.77
CTNND1-238	ENST00000534647	MIER2	Q8N344	545 aa		10.22	□□□□□ -0.77
CTNND1-238	ENST00000534647	ZNF527	Q8NB42	609 aa		10.22	□□□□□ -0.77
CTNND1-238	ENST00000534647	MAPK1IP1L	Q8NDC0	245 aa		10.22	□□□□□ -0.77
CTNND1-238	ENST00000534647	PSMA8	Q8TAA3	256 aa		10.22	□□□□□ -0.77
CTNND1-238	ENST00000534647	GPR119	Q8TDV5	335 aa		10.22	□□□□□ -0.77
CTNND1-238	ENST00000534647	FAM120B	Q96EK7	910 aa	Known RBP	10.22	□□□□□ -0.77
CTNND1-238	ENST00000534647	C16orf58	Q96GQ5	468 aa		10.22	□□□□□ -0.77
CTNND1-238	ENST00000534647	SH3YL1	Q96HL8	342 aa	Predicted RBP	10.22	□□□□□ -0.77
CTNND1-238	ENST00000534647	RADIL	Q96JH8	1075 aa		10.22	□□□□□ -0.77
CTNND1-238	ENST00000534647	MRGPRX4	Q96LA9	322 aa		10.22	□□□□□ -0.77
CTNND1-238	ENST00000534647	PPP3R2	Q96LZ3	170 aa		10.22	□□□□□ -0.77
CTNND1-238	ENST00000534647	C1orf21	Q9H246	121 aa		10.22	□□□□□ -0.77
CTNND1-238	ENST00000534647	MMADHC	Q9H3L0	296 aa	Predicted RBP	10.22	□□□□□ -0.77
CTNND1-238	ENST00000534647	TUBB1	Q9H4B7	451 aa		10.22	□□□□□ -0.77
CTNND1-238	ENST00000534647	ZNF385D	Q9H6B1	395 aa		10.22	□□□□□ -0.77
CTNND1-238	ENST00000534647	COQ10B	Q9H8M1	238 aa		10.22	□□□□□ -0.77
CTNND1-238	ENST00000534647	FAIM	Q9NVQ4	179 aa		10.22	□□□□□ -0.77
CTNND1-238	ENST00000534647	SH3BP4	Q9P0V3	963 aa		10.22	□□□□□ -0.77
CTNND1-238	ENST00000534647	ING1	Q9UK53	422 aa	Predicted RBP	10.22	□□□□□ -0.77
CTNND1-238	ENST00000534647	ABCA1	O95477	2261 aa		10.22	□□□□□ -0.77
CTNND1-238	ENST00000534647	RNF212B	A8MTL3	300 aa		10.21	□□□□□ -0.77
CTNND1-238	ENST00000534647	ZNF724	A8MTY0	619 aa		10.21	□□□□□ -0.77
CTNND1-238	ENST00000534647	SHISA9	B4DS77	424 aa		10.21	□□□□□ -0.77
CTNND1-238	ENST00000534647	NPIPB9	F8W1W9	429 aa		10.21	□□□□□ -0.77
CTNND1-238	ENST00000534647		H3BNH8	94 aa		10.21	□□□□□ -0.77
CTNND1-238	ENST00000534647	GSC2	O15499	205 aa		10.21	□□□□□ -0.77
CTNND1-238	ENST00000534647	CIB2	O75838	187 aa		10.21	□□□□□ -0.77
CTNND1-238	ENST00000534647	HMGN2	P05204	90 aa	Known RBP	10.21	□□□□□ -0.77
CTNND1-238	ENST00000534647	KRT16	P08779	473 aa		10.21	□□□□□ -0.77
CTNND1-238	ENST00000534647	PRKCA	P17252	672 aa		10.21	□□□□□ -0.77
CTNND1-238	ENST00000534647	CDKN1A	P38936	164 aa		10.21	□□□□□ -0.77
CTNND1-238	ENST00000534647	TSC22D1	Q15714	1073 aa		10.21	□□□□□ -0.77
CTNND1-238	ENST00000534647	MMEL1	Q495T6	779 aa		10.21	□□□□□ -0.77
CTNND1-238	ENST00000534647	XKR7	Q5GH72	579 aa		10.21	□□□□□ -0.77
CTNND1-238	ENST00000534647	TIMM23B	Q5SRD1	257 aa		10.21	□□□□□ -0.77
CTNND1-238	ENST00000534647	CCNJ	Q5T5M9	372 aa		10.21	□□□□□ -0.77
CTNND1-238	ENST00000534647	CBLN3	Q6UW01	205 aa		10.21	□□□□□ -0.77
CTNND1-238	ENST00000534647	C16orf89	Q6UX73	402 aa		10.21	□□□□□ -0.77
CTNND1-238	ENST00000534647	BHLHA15	Q7RTS1	189 aa	Predicted RBP	10.21	□□□□□ -0.77
CTNND1-238	ENST00000534647	ZC3HAV1	Q7Z2W4	902 aa	Known RBP	10.21	□□□□□ -0.77
CTNND1-238	ENST00000534647	FNDC5	Q8NAU1	212 aa		10.21	□□□□□ -0.77
CTNND1-238	ENST00000534647	RBM15B	Q8NDT2	890 aa	Known RBP	10.21	□□□□□ -0.77
CTNND1-238	ENST00000534647	OR10H5	Q8NGA6	315 aa		10.21	□□□□□ -0.77
CTNND1-238	ENST00000534647	OR2T11	Q8NH01	316 aa		10.21	□□□□□ -0.77
CTNND1-238	ENST00000534647	PHOSPHO1	Q8TCT1	267 aa		10.21	□□□□□ -0.77
CTNND1-238	ENST00000534647	ZFP90	Q8TF47	636 aa		10.21	□□□□□ -0.77
CTNND1-238	ENST00000534647	TMEM158	Q8WZ71	300 aa		10.21	□□□□□ -0.77
CTNND1-238	ENST00000534647	NEUROG1	Q92886	237 aa		10.21	□□□□□ -0.77
CTNND1-238	ENST00000534647	PSD2	Q9BQI7	771 aa		10.21	□□□□□ -0.77
CTNND1-238	ENST00000534647	ADAM19	Q9H013	955 aa		10.21	□□□□□ -0.77
CTNND1-238	ENST00000534647	SIRT3	Q9NTG7	399 aa	Predicted RBP	10.21	□□□□□ -0.77
CTNND1-238	ENST00000534647	TAS2R1	Q9NYW7	299 aa		10.21	□□□□□ -0.77
CTNND1-238	ENST00000534647	CISD1	Q9NZ45	108 aa	Known RBP	10.21	□□□□□ -0.77
CTNND1-238	ENST00000534647	KLHL9	Q9P2J3	617 aa		10.21	□□□□□ -0.77
CTNND1-238	ENST00000534647	ATP6V1H	Q9UI12	483 aa		10.21	□□□□□ -0.77
CTNND1-238	ENST00000534647	PTGDR2	Q9Y5Y4	395 aa		10.21	□□□□□ -0.77
CTNND1-238	ENST00000534647		A0A096LNT2	108 aa		10.2	□□□□□ -0.78

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