RNA–Protein interactions for RNA: ENST00000534551.2

VPS11-205, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS11, Length 585 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-205ENST00000534551 FUT4P22083 530 aa12.53□□□□□ -0.4
VPS11-205ENST00000534551 HTR1EP28566 365 aa12.53□□□□□ -0.4
VPS11-205ENST00000534551 KDELR2P33947 212 aa12.53□□□□□ -0.4
VPS11-205ENST00000534551 CARD18P57730 90 aa12.53□□□□□ -0.4
VPS11-205ENST00000534551 SF3B4Q15427 424 aaKnown RBP eCLIP12.53□□□□□ -0.4
VPS11-205ENST00000534551 OR1Q1Q15612 314 aa12.53□□□□□ -0.4
VPS11-205ENST00000534551 HSPB2Q16082 182 aa12.53□□□□□ -0.4
VPS11-205ENST00000534551 ZSWIM7Q19AV6 140 aa12.53□□□□□ -0.4
VPS11-205ENST00000534551 ALG10BQ5I7T1 473 aa12.53□□□□□ -0.4
VPS11-205ENST00000534551 WDR88Q6ZMY6 472 aa12.53□□□□□ -0.4
VPS11-205ENST00000534551 TRPM8Q7Z2W7 1104 aa12.53□□□□□ -0.4
VPS11-205ENST00000534551 FAM86B1Q8N7N1 296 aa12.53□□□□□ -0.4
VPS11-205ENST00000534551 RNF217Q8TC41 542 aa12.53□□□□□ -0.4
VPS11-205ENST00000534551 RNF128Q8TEB7 428 aa12.53□□□□□ -0.4
VPS11-205ENST00000534551 ASB5Q8WWX0 329 aa12.53□□□□□ -0.4
VPS11-205ENST00000534551 SLC35B4Q969S0 331 aa12.53□□□□□ -0.4
VPS11-205ENST00000534551 NSL1Q96IY1 281 aa12.53□□□□□ -0.4
VPS11-205ENST00000534551 MCHR1Q99705 422 aa12.53□□□□□ -0.4
VPS11-205ENST00000534551 PRRG4Q9BZD6 226 aa12.53□□□□□ -0.4
VPS11-205ENST00000534551 KLHL28Q9NXS3 571 aa12.53□□□□□ -0.4
VPS11-205ENST00000534551 STOML1Q9UBI4 398 aa12.53□□□□□ -0.4
VPS11-205ENST00000534551 MCTS1Q9ULC4 181 aaKnown RBP12.53□□□□□ -0.4
VPS11-205ENST00000534551 SH3GLB1Q9Y371 365 aa12.53□□□□□ -0.4
VPS11-205ENST00000534551 PKDREJQ9NTG1 2253 aa12.52□□□□□ -0.41
VPS11-205ENST00000534551 A0A0B4J2E0 115 aa12.52□□□□□ -0.41
VPS11-205ENST00000534551 A0A1B0GX12 115 aa12.52□□□□□ -0.41
VPS11-205ENST00000534551 SULT2B1O00204 365 aa12.52□□□□□ -0.41
VPS11-205ENST00000534551 GSTA4O15217 222 aa12.52□□□□□ -0.41
VPS11-205ENST00000534551 PDE5AO76074 875 aa12.52□□□□□ -0.41
VPS11-205ENST00000534551 LYPD3O95274 346 aa12.52□□□□□ -0.41
VPS11-205ENST00000534551 ZNF682O95780 498 aa12.52□□□□□ -0.41
VPS11-205ENST00000534551 SERPINA1P01009 418 aa12.52□□□□□ -0.41
VPS11-205ENST00000534551 GGT1P19440 569 aa12.52□□□□□ -0.41
VPS11-205ENST00000534551 CXCR1P25024 350 aa12.52□□□□□ -0.41
VPS11-205ENST00000534551 CTSSP25774 331 aa12.52□□□□□ -0.41
VPS11-205ENST00000534551 KIR2DL2P43627 348 aaPredicted RBP12.52□□□□□ -0.41
VPS11-205ENST00000534551 HTR3AP46098 478 aa12.52□□□□□ -0.41
VPS11-205ENST00000534551 OR2B6P58173 313 aa12.52□□□□□ -0.41
VPS11-205ENST00000534551 EGR4Q05215 589 aa12.52□□□□□ -0.41
VPS11-205ENST00000534551 FOXD4Q12950 439 aaPredicted RBP12.52□□□□□ -0.41
VPS11-205ENST00000534551 CEACAM7Q14002 265 aa12.52□□□□□ -0.41
VPS11-205ENST00000534551 GUSBP1Q15486 140 aa12.52□□□□□ -0.41
VPS11-205ENST00000534551 ENTPD8Q5MY95 495 aa12.52□□□□□ -0.41
VPS11-205ENST00000534551 C16orf89Q6UX73 402 aa12.52□□□□□ -0.41
VPS11-205ENST00000534551 DEF8Q6ZN54 512 aa12.52□□□□□ -0.41
VPS11-205ENST00000534551 TMPPEQ6ZT21 453 aa12.52□□□□□ -0.41
VPS11-205ENST00000534551 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.52□□□□□ -0.41
VPS11-205ENST00000534551 LUZP2Q86TE4 346 aa12.52□□□□□ -0.41
VPS11-205ENST00000534551 RANBP3LQ86VV4 465 aaPredicted RBP12.52□□□□□ -0.41
VPS11-205ENST00000534551 BHLHE22Q8NFJ8 381 aaPredicted RBP12.52□□□□□ -0.41
VPS11-205ENST00000534551 LILRB4Q8NHJ6 448 aa12.52□□□□□ -0.41
VPS11-205ENST00000534551 CPNE4Q96A23 557 aaPredicted RBP12.52□□□□□ -0.41
VPS11-205ENST00000534551 FAM162AQ96A26 154 aa12.52□□□□□ -0.41
VPS11-205ENST00000534551 ZNF300Q96RE9 604 aaPredicted RBP12.52□□□□□ -0.41
VPS11-205ENST00000534551 CDRT15Q96T59 188 aa12.52□□□□□ -0.41
VPS11-205ENST00000534551 ZNF559Q9BR84 538 aa12.52□□□□□ -0.41
VPS11-205ENST00000534551 KLHL13Q9P2N7 655 aa12.52□□□□□ -0.41
VPS11-205ENST00000534551 RPS6KB2Q9UBS0 482 aa12.52□□□□□ -0.41
VPS11-205ENST00000534551 AP3M1Q9Y2T2 418 aa12.52□□□□□ -0.41
VPS11-205ENST00000534551 SPIN1Q9Y657 262 aaPredicted RBP12.52□□□□□ -0.41
VPS11-205ENST00000534551 ELOA3DA6NLF2 546 aaPredicted RBP12.51□□□□□ -0.41
VPS11-205ENST00000534551 DVL2O14641 736 aa12.51□□□□□ -0.41
VPS11-205ENST00000534551 SMNDC1O75940 238 aaKnown RBP eCLIP12.51□□□□□ -0.41
VPS11-205ENST00000534551 FCGR2AP12318 317 aa12.51□□□□□ -0.41
VPS11-205ENST00000534551 CALB2P22676 271 aa12.51□□□□□ -0.41
VPS11-205ENST00000534551 CBLP22681 906 aa12.51□□□□□ -0.41
VPS11-205ENST00000534551 EDNRAP25101 427 aa12.51□□□□□ -0.41
VPS11-205ENST00000534551 AGTR1P30556 359 aa12.51□□□□□ -0.41
VPS11-205ENST00000534551 CDH12P55289 794 aa12.51□□□□□ -0.41
VPS11-205ENST00000534551 OR7A5Q15622 319 aa12.51□□□□□ -0.41
VPS11-205ENST00000534551 ELOA3BQ3SY89 546 aa12.51□□□□□ -0.41
VPS11-205ENST00000534551 PDSS1Q5T2R2 415 aa12.51□□□□□ -0.41
VPS11-205ENST00000534551 ZNF787Q6DD87 383 aa12.51□□□□□ -0.41
VPS11-205ENST00000534551 ABLIM2Q6H8Q1 611 aa12.51□□□□□ -0.41
VPS11-205ENST00000534551 C6orf89Q6UWU4 347 aa12.51□□□□□ -0.41
VPS11-205ENST00000534551 FCRLAQ7L513 359 aa12.51□□□□□ -0.41
VPS11-205ENST00000534551 BTLAQ7Z6A9 289 aa12.51□□□□□ -0.41
VPS11-205ENST00000534551 LSMEM1Q8N8F7 131 aa12.51□□□□□ -0.41
VPS11-205ENST00000534551 ELOA3Q8NG57 546 aa12.51□□□□□ -0.41
VPS11-205ENST00000534551 ADAMTS16Q8TE57 1224 aa12.51□□□□□ -0.41
VPS11-205ENST00000534551 PROX1Q92786 737 aa12.51□□□□□ -0.41
VPS11-205ENST00000534551 DDIT4LQ96D03 193 aa12.51□□□□□ -0.41
VPS11-205ENST00000534551 KTI12Q96EK9 354 aaPredicted RBP12.51□□□□□ -0.41
VPS11-205ENST00000534551 HSH2DQ96JZ2 352 aa12.51□□□□□ -0.41
VPS11-205ENST00000534551 CLPTM1LQ96KA5 538 aa12.51□□□□□ -0.41
VPS11-205ENST00000534551 PTDSS2Q9BVG9 487 aa12.51□□□□□ -0.41
VPS11-205ENST00000534551 SFXN3Q9BWM7 321 aa12.51□□□□□ -0.41
VPS11-205ENST00000534551 TRIM2Q9C040 744 aa12.51□□□□□ -0.41
VPS11-205ENST00000534551 PCDHAC1Q9H158 963 aa12.51□□□□□ -0.41
VPS11-205ENST00000534551 OPN3Q9H1Y3 402 aaPredicted RBP12.51□□□□□ -0.41
VPS11-205ENST00000534551 C12orf49Q9H741 205 aa12.51□□□□□ -0.41
VPS11-205ENST00000534551 SEC14L4Q9UDX3 406 aa12.51□□□□□ -0.41
VPS11-205ENST00000534551 CD300AQ9UGN4 299 aa12.51□□□□□ -0.41
VPS11-205ENST00000534551 ING1Q9UK53 422 aaPredicted RBP12.51□□□□□ -0.41
VPS11-205ENST00000534551 SNX13Q9Y5W8 968 aa12.51□□□□□ -0.41
VPS11-205ENST00000534551 LRRN3E7EW58 273 aa12.5□□□□□ -0.41
VPS11-205ENST00000534551 J3KTA2 159 aa12.5□□□□□ -0.41
VPS11-205ENST00000534551 ARPC2O15144 300 aa12.5□□□□□ -0.41
VPS11-205ENST00000534551 ZNF208O43345 1280 aa12.5□□□□□ -0.41
VPS11-205ENST00000534551 SS18L1O75177 396 aaPredicted RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms