RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, human

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-223	ENST00000534442	C22orf39	Q6P5X5	142 aa		3.76	□□□□□ -1.81
ECHDC1-223	ENST00000534442	SLC25A47	Q6Q0C1	308 aa		3.76	□□□□□ -1.81
ECHDC1-223	ENST00000534442	BTN2A1	Q7KYR7	527 aa		3.76	□□□□□ -1.81
ECHDC1-223	ENST00000534442	FAM89B	Q8N5H3	189 aa		3.76	□□□□□ -1.81
ECHDC1-223	ENST00000534442	C9orf106	Q8NAJ2	232 aa		3.76	□□□□□ -1.81
ECHDC1-223	ENST00000534442	OR52E1	Q8NGJ3	308 aa		3.76	□□□□□ -1.81
ECHDC1-223	ENST00000534442	DYRK2	Q92630	601 aa		3.76	□□□□□ -1.81
ECHDC1-223	ENST00000534442	ZNF501	Q96CX3	271 aa	Predicted RBP	3.76	□□□□□ -1.81
ECHDC1-223	ENST00000534442	GIMAP5	Q96F15	307 aa		3.76	□□□□□ -1.81
ECHDC1-223	ENST00000534442	DTD2	Q96FN9	168 aa		3.76	□□□□□ -1.81
ECHDC1-223	ENST00000534442	WRAP53	Q9BUR4	548 aa	Known RBP	3.76	□□□□□ -1.81
ECHDC1-223	ENST00000534442	PPAN	Q9NQ55	473 aa	Known RBP	3.76	□□□□□ -1.81
ECHDC1-223	ENST00000534442	NINJ2	Q9NZG7	142 aa		3.76	□□□□□ -1.81
ECHDC1-223	ENST00000534442	ELF5	Q9UKW6	265 aa	Predicted RBP	3.76	□□□□□ -1.81
ECHDC1-223	ENST00000534442	TNFRSF18	Q9Y5U5	241 aa		3.76	□□□□□ -1.81
ECHDC1-223	ENST00000534442	COLEC10	Q9Y6Z7	277 aa		3.76	□□□□□ -1.81
ECHDC1-223	ENST00000534442	DOCK7	Q96N67	2140 aa		3.76	□□□□□ -1.81
ECHDC1-223	ENST00000534442	DYNC1H1	Q14204	4646 aa	Known RBP	3.75	□□□□□ -1.81
ECHDC1-223	ENST00000534442	ANKRD12	Q6UB98	2062 aa		3.75	□□□□□ -1.81
ECHDC1-223	ENST00000534442	FAT2	Q9NYQ8	4349 aa		3.75	□□□□□ -1.81
ECHDC1-223	ENST00000534442		A0A087WUV0	522 aa	Predicted RBP	3.75	□□□□□ -1.81
ECHDC1-223	ENST00000534442	C2orf92	A0A1B0GVN3	265 aa		3.75	□□□□□ -1.81
ECHDC1-223	ENST00000534442	KRT87P	A6NCN2	255 aa		3.75	□□□□□ -1.81
ECHDC1-223	ENST00000534442		A8MVM7	634 aa		3.75	□□□□□ -1.81
ECHDC1-223	ENST00000534442	NPIPA2	E9PIF3	369 aa		3.75	□□□□□ -1.81
ECHDC1-223	ENST00000534442	KLRC4-KLRK1	H3BQV0	150 aa		3.75	□□□□□ -1.81
ECHDC1-223	ENST00000534442		K7ERQ8	282 aa		3.75	□□□□□ -1.81
ECHDC1-223	ENST00000534442	TFEC	O14948	347 aa	Predicted RBP	3.75	□□□□□ -1.81
ECHDC1-223	ENST00000534442	PSMD3	O43242	534 aa		3.75	□□□□□ -1.81
ECHDC1-223	ENST00000534442	SAP30	O75446	220 aa		3.75	□□□□□ -1.81
ECHDC1-223	ENST00000534442	TRMU	O75648	421 aa	Known RBP	3.75	□□□□□ -1.81
ECHDC1-223	ENST00000534442	LCA5L	O95447	670 aa		3.75	□□□□□ -1.81
ECHDC1-223	ENST00000534442	JCHAIN	P01591	159 aa		3.75	□□□□□ -1.81
ECHDC1-223	ENST00000534442	UGT1A6	P19224	532 aa		3.75	□□□□□ -1.81
ECHDC1-223	ENST00000534442	AHCY	P23526	432 aa		3.75	□□□□□ -1.81
ECHDC1-223	ENST00000534442	GJB2	P29033	226 aa		3.75	□□□□□ -1.81
ECHDC1-223	ENST00000534442	CD86	P42081	329 aa		3.75	□□□□□ -1.81
ECHDC1-223	ENST00000534442	NR0B1	P51843	470 aa	Known RBP	3.75	□□□□□ -1.81
ECHDC1-223	ENST00000534442	RPL36A	P83881	106 aa	Known RBP	3.75	□□□□□ -1.81
ECHDC1-223	ENST00000534442	SLC3A1	Q07837	685 aa		3.75	□□□□□ -1.81
ECHDC1-223	ENST00000534442	SRSF9	Q13242	221 aa	Known RBP eCLIP	3.75	□□□□□ -1.81
ECHDC1-223	ENST00000534442	DUSP5	Q16690	384 aa		3.75	□□□□□ -1.81
ECHDC1-223	ENST00000534442	RIPPLY2	Q5TAB7	128 aa		3.75	□□□□□ -1.81
ECHDC1-223	ENST00000534442	FAM53A	Q6NSI3	398 aa	Predicted RBP	3.75	□□□□□ -1.81
ECHDC1-223	ENST00000534442	IRGC	Q6NXR0	463 aa		3.75	□□□□□ -1.81
ECHDC1-223	ENST00000534442	ARHGAP11A	Q6P4F7	1023 aa		3.75	□□□□□ -1.81
ECHDC1-223	ENST00000534442	CLEC2A	Q6UVW9	174 aa		3.75	□□□□□ -1.81
ECHDC1-223	ENST00000534442	SH2D5	Q6ZV89	423 aa		3.75	□□□□□ -1.81
ECHDC1-223	ENST00000534442	TMEM99	Q8N816	258 aa		3.75	□□□□□ -1.81
ECHDC1-223	ENST00000534442	C12orf29	Q8N999	325 aa		3.75	□□□□□ -1.81
ECHDC1-223	ENST00000534442	SLC13A3	Q8WWT9	602 aa		3.75	□□□□□ -1.81
ECHDC1-223	ENST00000534442	SYAP1	Q96A49	352 aa	Predicted RBP	3.75	□□□□□ -1.81
ECHDC1-223	ENST00000534442	CFAP36	Q96G28	342 aa		3.75	□□□□□ -1.81
ECHDC1-223	ENST00000534442	PRAC1	Q96KF2	57 aa		3.75	□□□□□ -1.81
ECHDC1-223	ENST00000534442	NTMT1	Q9BV86	223 aa		3.75	□□□□□ -1.81
ECHDC1-223	ENST00000534442	ABCG8	Q9H221	673 aa		3.75	□□□□□ -1.81
ECHDC1-223	ENST00000534442	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	3.75	□□□□□ -1.81
ECHDC1-223	ENST00000534442	SMYD3	Q9H7B4	428 aa		3.75	□□□□□ -1.81
ECHDC1-223	ENST00000534442	ZNF160	Q9HCG1	818 aa		3.75	□□□□□ -1.81
ECHDC1-223	ENST00000534442	SLC52A3	Q9NQ40	469 aa		3.75	□□□□□ -1.81
ECHDC1-223	ENST00000534442	MAN2C1	Q9NTJ4	1040 aa		3.75	□□□□□ -1.81
ECHDC1-223	ENST00000534442	ZCCHC3	Q9NUD5	404 aa	Known RBP	3.75	□□□□□ -1.81
ECHDC1-223	ENST00000534442	GPATCH2L	Q9NWQ4	482 aa		3.75	□□□□□ -1.81
ECHDC1-223	ENST00000534442	TRIM10	Q9UDY6	481 aa		3.75	□□□□□ -1.81
ECHDC1-223	ENST00000534442	STRAP	Q9Y3F4	350 aa	Known RBP	3.75	□□□□□ -1.81
ECHDC1-223	ENST00000534442	PPIAL4A	Q9Y536	164 aa		3.75	□□□□□ -1.81
ECHDC1-223	ENST00000534442	OR51B4	Q9Y5P0	310 aa		3.75	□□□□□ -1.81
ECHDC1-223	ENST00000534442	TRBV2	A0A0J9YWF9	115 aa		3.74	□□□□□ -1.81
ECHDC1-223	ENST00000534442	CCDC162P	A2VCL2	907 aa		3.74	□□□□□ -1.81
ECHDC1-223	ENST00000534442	GOLGA8IP	A6NC78	632 aa		3.74	□□□□□ -1.81
ECHDC1-223	ENST00000534442	GOLGA8J	A6NMD2	632 aa		3.74	□□□□□ -1.81
ECHDC1-223	ENST00000534442	SRRM4	A7MD48	611 aa	Known RBP	3.74	□□□□□ -1.81
ECHDC1-223	ENST00000534442	EEF1E1-BLOC1S5	C9J1V9	151 aa		3.74	□□□□□ -1.81
ECHDC1-223	ENST00000534442		E7ENQ6	273 aa		3.74	□□□□□ -1.81
ECHDC1-223	ENST00000534442	CPLX1	O14810	134 aa		3.74	□□□□□ -1.81
ECHDC1-223	ENST00000534442	EEF1E1	O43324	174 aa	Known RBP	3.74	□□□□□ -1.81
ECHDC1-223	ENST00000534442	BUB1	O43683	1085 aa		3.74	□□□□□ -1.81
ECHDC1-223	ENST00000534442	ZNF354A	O60765	605 aa	Predicted RBP	3.74	□□□□□ -1.81
ECHDC1-223	ENST00000534442	KHDRBS3	O75525	346 aa	Known RBP	3.74	□□□□□ -1.81
ECHDC1-223	ENST00000534442	GRAP2	O75791	330 aa		3.74	□□□□□ -1.81
ECHDC1-223	ENST00000534442	AP2A2	O94973	939 aa		3.74	□□□□□ -1.81
ECHDC1-223	ENST00000534442	IGLV2-11	P01706	119 aa		3.74	□□□□□ -1.81
ECHDC1-223	ENST00000534442	SLC4A1	P02730	911 aa		3.74	□□□□□ -1.81
ECHDC1-223	ENST00000534442	PRSS1	P07477	247 aa		3.74	□□□□□ -1.81
ECHDC1-223	ENST00000534442	CHRNG	P07510	517 aa		3.74	□□□□□ -1.81
ECHDC1-223	ENST00000534442	PRSS56	P0CW18	603 aa		3.74	□□□□□ -1.81
ECHDC1-223	ENST00000534442	SLC2A2	P11168	524 aa	Predicted RBP	3.74	□□□□□ -1.81
ECHDC1-223	ENST00000534442	CPA3	P15088	417 aa		3.74	□□□□□ -1.81
ECHDC1-223	ENST00000534442	B4GALT1	P15291	398 aa		3.74	□□□□□ -1.81
ECHDC1-223	ENST00000534442	TRIM23	P36406	574 aa		3.74	□□□□□ -1.81
ECHDC1-223	ENST00000534442	CCNH	P51946	323 aa	Predicted RBP	3.74	□□□□□ -1.81
ECHDC1-223	ENST00000534442	ZNF131	P52739	623 aa		3.74	□□□□□ -1.81
ECHDC1-223	ENST00000534442	DCDC1	P59894	354 aa		3.74	□□□□□ -1.81
ECHDC1-223	ENST00000534442	MYL6	P60660	151 aa		3.74	□□□□□ -1.81
ECHDC1-223	ENST00000534442	PPP1CA	P62136	330 aa		3.74	□□□□□ -1.81
ECHDC1-223	ENST00000534442	CSNK2B	P67870	215 aa		3.74	□□□□□ -1.81
ECHDC1-223	ENST00000534442	GALK2	Q01415	458 aa		3.74	□□□□□ -1.81
ECHDC1-223	ENST00000534442	WASHC5	Q12768	1159 aa		3.74	□□□□□ -1.81
ECHDC1-223	ENST00000534442	LCP2	Q13094	533 aa		3.74	□□□□□ -1.81
ECHDC1-223	ENST00000534442	EIF4EBP2	Q13542	120 aa	Predicted RBP	3.74	□□□□□ -1.81

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