RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, human

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHMP4A-208	ENST00000534106	SLC35E2	P0CK97	266 aa		2.56	□□□□□ -2
CHMP4A-208	ENST00000534106	PCNA	P12004	261 aa		2.56	□□□□□ -2
CHMP4A-208	ENST00000534106	DAO	P14920	347 aa		2.56	□□□□□ -2
CHMP4A-208	ENST00000534106	ZNF17	P17021	662 aa		2.56	□□□□□ -2
CHMP4A-208	ENST00000534106	NAGA	P17050	411 aa		2.56	□□□□□ -2
CHMP4A-208	ENST00000534106	EPOR	P19235	508 aa		2.56	□□□□□ -2
CHMP4A-208	ENST00000534106	TPSB2	P20231	275 aa		2.56	□□□□□ -2
CHMP4A-208	ENST00000534106	OGN	P20774	298 aa	Known RBP	2.56	□□□□□ -2
CHMP4A-208	ENST00000534106	IGHV1-2	P23083	117 aa		2.56	□□□□□ -2
CHMP4A-208	ENST00000534106	COL8A2	P25067	703 aa		2.56	□□□□□ -2
CHMP4A-208	ENST00000534106	AGTR1	P30556	359 aa		2.56	□□□□□ -2
CHMP4A-208	ENST00000534106	CTNNA1	P35221	906 aa	Known RBP	2.56	□□□□□ -2
CHMP4A-208	ENST00000534106	BSG	P35613	385 aa		2.56	□□□□□ -2
CHMP4A-208	ENST00000534106	FDFT1	P37268	417 aa		2.56	□□□□□ -2
CHMP4A-208	ENST00000534106	FEN1	P39748	380 aa	Known RBP	2.56	□□□□□ -2
CHMP4A-208	ENST00000534106	MAGEA1	P43355	309 aa		2.56	□□□□□ -2
CHMP4A-208	ENST00000534106	KCNJ1	P48048	391 aa		2.56	□□□□□ -2
CHMP4A-208	ENST00000534106	EMD	P50402	254 aa		2.56	□□□□□ -2
CHMP4A-208	ENST00000534106	DVL1P1	P54792	670 aa	Predicted RBP	2.56	□□□□□ -2
CHMP4A-208	ENST00000534106	DSCR4	P56555	118 aa	Predicted RBP	2.56	□□□□□ -2
CHMP4A-208	ENST00000534106	RWDD2B	P57060	319 aa		2.56	□□□□□ -2
CHMP4A-208	ENST00000534106	CARD18	P57730	90 aa		2.56	□□□□□ -2
CHMP4A-208	ENST00000534106	RPP38	P78345	283 aa	Known RBP	2.56	□□□□□ -2
CHMP4A-208	ENST00000534106	ITGAD	Q13349	1161 aa		2.56	□□□□□ -2
CHMP4A-208	ENST00000534106	THOC5	Q13769	683 aa	Known RBP	2.56	□□□□□ -2
CHMP4A-208	ENST00000534106	DDX39B	Q13838	428 aa	Known RBP	2.56	□□□□□ -2
CHMP4A-208	ENST00000534106	DHX34	Q14147	1143 aa	Known RBP	2.56	□□□□□ -2
CHMP4A-208	ENST00000534106	FGFBP1	Q14512	234 aa		2.56	□□□□□ -2
CHMP4A-208	ENST00000534106	SLMAP	Q14BN4	828 aa		2.56	□□□□□ -2
CHMP4A-208	ENST00000534106	SPA17	Q15506	151 aa		2.56	□□□□□ -2
CHMP4A-208	ENST00000534106	TRIP13	Q15645	432 aa	Predicted RBP	2.56	□□□□□ -2
CHMP4A-208	ENST00000534106	TPSAB1	Q15661	275 aa		2.56	□□□□□ -2
CHMP4A-208	ENST00000534106	LTB4R	Q15722	352 aa		2.56	□□□□□ -2
CHMP4A-208	ENST00000534106	WHAMMP3	Q1A5X7	153 aa		2.56	□□□□□ -2
CHMP4A-208	ENST00000534106	HSP90AA5P	Q58FG0	334 aa		2.56	□□□□□ -2
CHMP4A-208	ENST00000534106	VAX1	Q5SQQ9	334 aa		2.56	□□□□□ -2
CHMP4A-208	ENST00000534106	TTC19	Q6DKK2	380 aa	Predicted RBP	2.56	□□□□□ -2
CHMP4A-208	ENST00000534106	ASPHD2	Q6ICH7	369 aa		2.56	□□□□□ -2
CHMP4A-208	ENST00000534106	CASC4	Q6P4E1	433 aa		2.56	□□□□□ -2
CHMP4A-208	ENST00000534106	SHQ1	Q6PI26	577 aa	Known RBP	2.56	□□□□□ -2
CHMP4A-208	ENST00000534106	SCIMP	Q6UWF3	145 aa		2.56	□□□□□ -2
CHMP4A-208	ENST00000534106	APOOL	Q6UXV4	268 aa		2.56	□□□□□ -2
CHMP4A-208	ENST00000534106	RAD9B	Q6WBX8	426 aa		2.56	□□□□□ -2
CHMP4A-208	ENST00000534106	USP43	Q70EL4	1123 aa		2.56	□□□□□ -2
CHMP4A-208	ENST00000534106	SPATA19	Q7Z5L4	167 aa		2.56	□□□□□ -2
CHMP4A-208	ENST00000534106	KIR3DL3	Q8N743	410 aa		2.56	□□□□□ -2
CHMP4A-208	ENST00000534106	FADS6	Q8N9I5	356 aa		2.56	□□□□□ -2
CHMP4A-208	ENST00000534106	WDR31	Q8NA23	367 aa		2.56	□□□□□ -2
CHMP4A-208	ENST00000534106	ATP6V1C2	Q8NEY4	427 aa		2.56	□□□□□ -2
CHMP4A-208	ENST00000534106	OR4K17	Q8NGC6	315 aa		2.56	□□□□□ -2
CHMP4A-208	ENST00000534106	OR52R1	Q8NGF1	315 aa		2.56	□□□□□ -2
CHMP4A-208	ENST00000534106	POC1B	Q8TC44	478 aa		2.56	□□□□□ -2
CHMP4A-208	ENST00000534106	ZNF473	Q8WTR7	871 aa	Known RBP	2.56	□□□□□ -2
CHMP4A-208	ENST00000534106	ANKRD49	Q8WVL7	239 aa		2.56	□□□□□ -2
CHMP4A-208	ENST00000534106	KCNJ9	Q92806	393 aa		2.56	□□□□□ -2
CHMP4A-208	ENST00000534106	TANK	Q92844	425 aa		2.56	□□□□□ -2
CHMP4A-208	ENST00000534106	OSTF1	Q92882	214 aa		2.56	□□□□□ -2
CHMP4A-208	ENST00000534106	PEX13	Q92968	403 aa		2.56	□□□□□ -2
CHMP4A-208	ENST00000534106	TRIM63	Q969Q1	353 aa		2.56	□□□□□ -2
CHMP4A-208	ENST00000534106	ZNF566	Q969W8	418 aa		2.56	□□□□□ -2
CHMP4A-208	ENST00000534106	TMEM186	Q96B77	213 aa		2.56	□□□□□ -2
CHMP4A-208	ENST00000534106	EFHD2	Q96C19	240 aa	Predicted RBP	2.56	□□□□□ -2
CHMP4A-208	ENST00000534106	ZNF524	Q96C55	264 aa		2.56	□□□□□ -2
CHMP4A-208	ENST00000534106	LRRC58	Q96CX6	371 aa		2.56	□□□□□ -2
CHMP4A-208	ENST00000534106	IQCD	Q96DY2	449 aa		2.56	□□□□□ -2
CHMP4A-208	ENST00000534106	VPS39	Q96JC1	886 aa		2.56	□□□□□ -2
CHMP4A-208	ENST00000534106	ADGRG7	Q96K78	797 aa		2.56	□□□□□ -2
CHMP4A-208	ENST00000534106	CCDC42	Q96M95	316 aa		2.56	□□□□□ -2
CHMP4A-208	ENST00000534106	COL21A1	Q96P44	957 aa		2.56	□□□□□ -2
CHMP4A-208	ENST00000534106	OSBPL9	Q96SU4	736 aa		2.56	□□□□□ -2
CHMP4A-208	ENST00000534106	EGFL8	Q99944	293 aa		2.56	□□□□□ -2
CHMP4A-208	ENST00000534106	INPP5K	Q9BT40	448 aa		2.56	□□□□□ -2
CHMP4A-208	ENST00000534106	TRMO	Q9BU70	441 aa		2.56	□□□□□ -2
CHMP4A-208	ENST00000534106	MS4A8	Q9BY19	250 aa		2.56	□□□□□ -2
CHMP4A-208	ENST00000534106	SRXN1	Q9BYN0	137 aa		2.56	□□□□□ -2
CHMP4A-208	ENST00000534106	KRTAP2-2	Q9BYT5	123 aa		2.56	□□□□□ -2
CHMP4A-208	ENST00000534106	WDR12	Q9GZL7	423 aa	Known RBP	2.56	□□□□□ -2
CHMP4A-208	ENST00000534106	PRSS22	Q9GZN4	317 aa		2.56	□□□□□ -2
CHMP4A-208	ENST00000534106	IL22	Q9GZX6	179 aa		2.56	□□□□□ -2
CHMP4A-208	ENST00000534106	FAM107B	Q9H098	131 aa		2.56	□□□□□ -2
CHMP4A-208	ENST00000534106	STMN4	Q9H169	189 aa	Predicted RBP	2.56	□□□□□ -2
CHMP4A-208	ENST00000534106	CCDC68	Q9H2F9	335 aa		2.56	□□□□□ -2
CHMP4A-208	ENST00000534106	NGB	Q9NPG2	151 aa		2.56	□□□□□ -2
CHMP4A-208	ENST00000534106	SMYD2	Q9NRG4	433 aa		2.56	□□□□□ -2
CHMP4A-208	ENST00000534106	ACSS1	Q9NUB1	689 aa	Predicted RBP	2.56	□□□□□ -2
CHMP4A-208	ENST00000534106	C20orf96	Q9NUD7	363 aa	Predicted RBP	2.56	□□□□□ -2
CHMP4A-208	ENST00000534106	SDAD1	Q9NVU7	687 aa	Known RBP eCLIP	2.56	□□□□□ -2
CHMP4A-208	ENST00000534106	BFAR	Q9NZS9	450 aa		2.56	□□□□□ -2
CHMP4A-208	ENST00000534106	USP22	Q9UPT9	525 aa		2.56	□□□□□ -2
CHMP4A-208	ENST00000534106	MOK	Q9UQ07	419 aa		2.56	□□□□□ -2
CHMP4A-208	ENST00000534106	PLLP	Q9Y342	182 aa		2.56	□□□□□ -2
CHMP4A-208	ENST00000534106	MRPS18C	Q9Y3D5	142 aa	Known RBP	2.56	□□□□□ -2
CHMP4A-208	ENST00000534106	PLCE1	Q9P212	2302 aa		2.56	□□□□□ -2
CHMP4A-208	ENST00000534106	UBR4	Q5T4S7	5183 aa		2.55	□□□□□ -2
CHMP4A-208	ENST00000534106		A0A087WWL8	130 aa		2.55	□□□□□ -2
CHMP4A-208	ENST00000534106	GOLGA8Q	A0A0J9YX86	632 aa		2.55	□□□□□ -2
CHMP4A-208	ENST00000534106	GOLGA8O	A6NCC3	632 aa		2.55	□□□□□ -2
CHMP4A-208	ENST00000534106	PRSS29P	A6NIE9	313 aa		2.55	□□□□□ -2
CHMP4A-208	ENST00000534106	ZNF785	A8K8V0	405 aa		2.55	□□□□□ -2
CHMP4A-208	ENST00000534106	ERI2	A8K979	691 aa	Known RBP	2.55	□□□□□ -2

Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms