RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 TBC1D3DA0A087WVF3 549 aa17.85■□□□□ 0.45
CAPN1-226ENST00000533820 TBC1D3IA0A087WXS9 549 aa17.85■□□□□ 0.45
CAPN1-226ENST00000533820 TBC1D3EA0A087X179 549 aa17.85■□□□□ 0.45
CAPN1-226ENST00000533820 TBC1D3KA0A087X1G2 549 aa17.85■□□□□ 0.45
CAPN1-226ENST00000533820 TBC1D3FA6NER0 549 aaPredicted RBP17.85■□□□□ 0.45
CAPN1-226ENST00000533820 TBC1D3LB9A6J9 549 aa17.85■□□□□ 0.45
CAPN1-226ENST00000533820 H0Y8X5 98 aa17.85■□□□□ 0.45
CAPN1-226ENST00000533820 SSNA1O43805 119 aa17.85■□□□□ 0.45
CAPN1-226ENST00000533820 CTSVO60911 334 aa17.85■□□□□ 0.45
CAPN1-226ENST00000533820 ADRB1P08588 477 aa17.85■□□□□ 0.45
CAPN1-226ENST00000533820 TBC1D3HP0C7X1 549 aa17.85■□□□□ 0.45
CAPN1-226ENST00000533820 RBMS1P29558 406 aaKnown RBP17.85■□□□□ 0.45
CAPN1-226ENST00000533820 GABRA3P34903 492 aa17.85■□□□□ 0.45
CAPN1-226ENST00000533820 TBC1D3GQ6DHY5 549 aa17.85■□□□□ 0.45
CAPN1-226ENST00000533820 TBC1D3CQ6IPX1 549 aa17.85■□□□□ 0.45
CAPN1-226ENST00000533820 TBC1D3Q8IZP1 549 aaPredicted RBP17.85■□□□□ 0.45
CAPN1-226ENST00000533820 BRIX1Q8TDN6 353 aaKnown RBP17.85■□□□□ 0.45
CAPN1-226ENST00000533820 NR4A3Q92570 626 aa17.85■□□□□ 0.45
CAPN1-226ENST00000533820 SMARCD2Q92925 531 aa17.85■□□□□ 0.45
CAPN1-226ENST00000533820 ASB16Q96NS5 453 aa17.85■□□□□ 0.45
CAPN1-226ENST00000533820 RBCK1Q9BYM8 510 aa17.85■□□□□ 0.45
CAPN1-226ENST00000533820 ADGRL4Q9HBW9 690 aa17.85■□□□□ 0.45
CAPN1-226ENST00000533820 SLCO1C1Q9NYB5 712 aa17.85■□□□□ 0.45
CAPN1-226ENST00000533820 HNRNPA1P09651 372 aaKnown RBP eCLIP17.84■□□□□ 0.45
CAPN1-226ENST00000533820 PTBP1P26599 531 aaKnown RBP eCLIP17.84■□□□□ 0.454e-7■■□□□ 12.9
CAPN1-226ENST00000533820 NDUFS1P28331 727 aa17.84■□□□□ 0.45
CAPN1-226ENST00000533820 GJA4P35212 333 aa17.84■□□□□ 0.45
CAPN1-226ENST00000533820 GBX2P52951 348 aaPredicted RBP17.84■□□□□ 0.45
CAPN1-226ENST00000533820 VSX2P58304 361 aaPredicted RBP17.84■□□□□ 0.45
CAPN1-226ENST00000533820 LNX2Q8N448 690 aa17.84■□□□□ 0.45
CAPN1-226ENST00000533820 OR52E2Q8NGJ4 325 aa17.84■□□□□ 0.45
CAPN1-226ENST00000533820 CNOT9Q92600 299 aaKnown RBP17.84■□□□□ 0.45
CAPN1-226ENST00000533820 GPR174Q9BXC1 333 aa17.84■□□□□ 0.45
CAPN1-226ENST00000533820 ZFP64Q9NPA5 681 aa17.84■□□□□ 0.45
CAPN1-226ENST00000533820 STARD5Q9NSY2 213 aa17.84■□□□□ 0.45
CAPN1-226ENST00000533820 DCAF16Q9NXF7 216 aa17.84■□□□□ 0.45
CAPN1-226ENST00000533820 ELF5Q9UKW6 265 aaPredicted RBP17.84■□□□□ 0.45
CAPN1-226ENST00000533820 SIGLEC7Q9Y286 467 aa17.84■□□□□ 0.45
CAPN1-226ENST00000533820 MED31Q9Y3C7 131 aa17.84■□□□□ 0.45
CAPN1-226ENST00000533820 POM121BA6NF01 834 aa17.84■□□□□ 0.45
CAPN1-226ENST00000533820 F8W036 122 aa17.84■□□□□ 0.45
CAPN1-226ENST00000533820 TEX46H3BTG2 121 aa17.84■□□□□ 0.45
CAPN1-226ENST00000533820 ADAM11O75078 769 aa17.84■□□□□ 0.45
CAPN1-226ENST00000533820 SLC35G6P0C7Q6 338 aa17.84■□□□□ 0.45
CAPN1-226ENST00000533820 PTHLHP12272 177 aa17.84■□□□□ 0.45
CAPN1-226ENST00000533820 ZNF81P51508 661 aa17.84■□□□□ 0.45
CAPN1-226ENST00000533820 HTRA4P83105 476 aaPredicted RBP17.84■□□□□ 0.45
CAPN1-226ENST00000533820 TNFRSF17Q02223 184 aa17.84■□□□□ 0.45
CAPN1-226ENST00000533820 ARHGAP11BQ3KRB8 267 aa17.84■□□□□ 0.45
CAPN1-226ENST00000533820 C2orf27AQ580R0 203 aa17.84■□□□□ 0.45
CAPN1-226ENST00000533820 CCDC36Q8IYA8 594 aa17.84■□□□□ 0.45
CAPN1-226ENST00000533820 ZNF433Q8N7K0 673 aaPredicted RBP17.84■□□□□ 0.45
CAPN1-226ENST00000533820 FAM98AQ8NCA5 519 aaKnown RBP17.84■□□□□ 0.45
CAPN1-226ENST00000533820 TMEM52Q8NDY8 209 aa17.84■□□□□ 0.45
CAPN1-226ENST00000533820 OR14A2Q96R54 314 aa17.84■□□□□ 0.45
CAPN1-226ENST00000533820 CHIAQ9BZP6 476 aa17.84■□□□□ 0.45
CAPN1-226ENST00000533820 SRMSQ9H3Y6 488 aa17.84■□□□□ 0.45
CAPN1-226ENST00000533820 PIGUQ9H490 435 aa17.84■□□□□ 0.45
CAPN1-226ENST00000533820 CMC2Q9NRP2 79 aa17.84■□□□□ 0.45
CAPN1-226ENST00000533820 EMC3Q9P0I2 261 aa17.84■□□□□ 0.45
CAPN1-226ENST00000533820 THAP10Q9P2Z0 257 aaPredicted RBP17.84■□□□□ 0.45
CAPN1-226ENST00000533820 SLC22A31A6NKX4 558 aa17.83■□□□□ 0.45
CAPN1-226ENST00000533820 FAM171A2A8MVW0 826 aa17.83■□□□□ 0.45
CAPN1-226ENST00000533820 IGFALSP35858 605 aa17.83■□□□□ 0.45
CAPN1-226ENST00000533820 CLDN12P56749 244 aa17.83■□□□□ 0.45
CAPN1-226ENST00000533820 ZNF425Q6IV72 752 aa17.83■□□□□ 0.45
CAPN1-226ENST00000533820 FBXO42Q6P3S6 717 aa17.83■□□□□ 0.45
CAPN1-226ENST00000533820 C17orf107Q6ZR85 190 aa17.83■□□□□ 0.45
CAPN1-226ENST00000533820 YIPF5Q969M3 257 aa17.83■□□□□ 0.45
CAPN1-226ENST00000533820 DERL3Q96Q80 235 aa17.83■□□□□ 0.45
CAPN1-226ENST00000533820 RAB11FIP5Q9BXF6 653 aa17.83■□□□□ 0.45
CAPN1-226ENST00000533820 BCL2L14Q9BZR8 327 aa17.83■□□□□ 0.45
CAPN1-226ENST00000533820 SLC25A18Q9H1K4 315 aa17.83■□□□□ 0.45
CAPN1-226ENST00000533820 PTPRSQ13332 1948 aa17.83■□□□□ 0.45
CAPN1-226ENST00000533820 STX11O75558 287 aa17.83■□□□□ 0.44
CAPN1-226ENST00000533820 RCBTB2O95199 551 aa17.83■□□□□ 0.44
CAPN1-226ENST00000533820 VEGFBP49765 207 aa17.83■□□□□ 0.44
CAPN1-226ENST00000533820 NNATQ16517 81 aa17.83■□□□□ 0.44
CAPN1-226ENST00000533820 PIAS4Q8N2W9 510 aaPredicted RBP17.83■□□□□ 0.44
CAPN1-226ENST00000533820 TSACCQ96A04 125 aaPredicted RBP17.83■□□□□ 0.44
CAPN1-226ENST00000533820 AHCYL2Q96HN2 611 aaKnown RBP17.83■□□□□ 0.44
CAPN1-226ENST00000533820 PGLYRP3Q96LB9 341 aa17.83■□□□□ 0.44
CAPN1-226ENST00000533820 ERMAPQ96PL5 475 aaPredicted RBP17.83■□□□□ 0.44
CAPN1-226ENST00000533820 UBL7Q96S82 380 aaPredicted RBP17.83■□□□□ 0.44
CAPN1-226ENST00000533820 SPRTNQ9H040 489 aaPredicted RBP17.83■□□□□ 0.44
CAPN1-226ENST00000533820 PLPP2O43688 288 aa17.83■□□□□ 0.44
CAPN1-226ENST00000533820 WNT1P04628 370 aa17.83■□□□□ 0.44
CAPN1-226ENST00000533820 CPMP14384 443 aa17.83■□□□□ 0.44
CAPN1-226ENST00000533820 GDI2P50395 445 aaKnown RBP17.83■□□□□ 0.44
CAPN1-226ENST00000533820 BTG1P62324 171 aa17.83■□□□□ 0.44
CAPN1-226ENST00000533820 DUSP8Q13202 625 aa17.83■□□□□ 0.44
CAPN1-226ENST00000533820 PYHIN1Q6K0P9 492 aa17.83■□□□□ 0.44
CAPN1-226ENST00000533820 ZNF619Q8N2I2 560 aa17.83■□□□□ 0.44
CAPN1-226ENST00000533820 CEP76Q8TAP6 659 aa17.83■□□□□ 0.44
CAPN1-226ENST00000533820 THAP4Q8WY91 577 aa17.83■□□□□ 0.44
CAPN1-226ENST00000533820 GAL3ST3Q96A11 431 aa17.83■□□□□ 0.44
CAPN1-226ENST00000533820 SLC17A9Q9BYT1 436 aa17.83■□□□□ 0.44
CAPN1-226ENST00000533820 LYARQ9NX58 379 aaKnown RBP17.83■□□□□ 0.44
CAPN1-226ENST00000533820 KCMF1Q9P0J7 381 aa17.83■□□□□ 0.44
CAPN1-226ENST00000533820 TRANK1O15050 2925 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms