RNA–Protein interactions for RNA: ENST00000533801.6

ATP2C1-224, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,690 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-224ENST00000533801 NR4A3Q92570 626 aa14.62□□□□□ -0.07
ATP2C1-224ENST00000533801 C11orf54Q9H0W9 315 aaPredicted RBP14.62□□□□□ -0.07
ATP2C1-224ENST00000533801 ANKRD19PQ9H560 264 aa14.62□□□□□ -0.07
ATP2C1-224ENST00000533801 ZNF223Q9UK11 482 aaPredicted RBP14.62□□□□□ -0.07
ATP2C1-224ENST00000533801 SLC35A3Q9Y2D2 325 aa14.62□□□□□ -0.07
ATP2C1-224ENST00000533801 IL1AP01583 271 aa14.62□□□□□ -0.07
ATP2C1-224ENST00000533801 S1PR1P21453 382 aa14.62□□□□□ -0.07
ATP2C1-224ENST00000533801 ACAA2P42765 397 aaKnown RBP14.62□□□□□ -0.07
ATP2C1-224ENST00000533801 GRK6P43250 576 aa14.62□□□□□ -0.07
ATP2C1-224ENST00000533801 TPBGQ13641 420 aa14.62□□□□□ -0.07
ATP2C1-224ENST00000533801 ULK3Q6PHR2 472 aa14.62□□□□□ -0.07
ATP2C1-224ENST00000533801 KDM8Q8N371 416 aa14.62□□□□□ -0.07
ATP2C1-224ENST00000533801 NKX3-1Q99801 234 aaPredicted RBP14.62□□□□□ -0.07
ATP2C1-224ENST00000533801 MCCC2Q9HCC0 563 aa14.62□□□□□ -0.07
ATP2C1-224ENST00000533801 NLKQ9UBE8 527 aa14.62□□□□□ -0.07
ATP2C1-224ENST00000533801 RASD1Q9Y272 281 aa14.62□□□□□ -0.07
ATP2C1-224ENST00000533801 N6AMT1Q9Y5N5 214 aa14.62□□□□□ -0.07
ATP2C1-224ENST00000533801 ISPDA4D126 451 aa14.62□□□□□ -0.07
ATP2C1-224ENST00000533801 SLC22A31A6NKX4 558 aa14.62□□□□□ -0.07
ATP2C1-224ENST00000533801 SRPX2O60687 465 aaPredicted RBP14.62□□□□□ -0.07
ATP2C1-224ENST00000533801 EDNRAP25101 427 aa14.62□□□□□ -0.07
ATP2C1-224ENST00000533801 SELENBP1Q13228 472 aa14.62□□□□□ -0.07
ATP2C1-224ENST00000533801 GRM7Q14831 915 aa14.62□□□□□ -0.07
ATP2C1-224ENST00000533801 GDPGP1Q6ZNW5 385 aa14.62□□□□□ -0.07
ATP2C1-224ENST00000533801 LANCL3Q6ZV70 420 aa14.62□□□□□ -0.07
ATP2C1-224ENST00000533801 RAB43Q86YS6 212 aa14.62□□□□□ -0.07
ATP2C1-224ENST00000533801 ZNF671Q8TAW3 534 aa14.62□□□□□ -0.07
ATP2C1-224ENST00000533801 PIGKQ92643 395 aa14.62□□□□□ -0.07
ATP2C1-224ENST00000533801 GHSRQ92847 366 aa14.62□□□□□ -0.07
ATP2C1-224ENST00000533801 NUDT22Q9BRQ3 303 aa14.62□□□□□ -0.07
ATP2C1-224ENST00000533801 NANSQ9NR45 359 aa14.62□□□□□ -0.07
ATP2C1-224ENST00000533801 CMC2Q9NRP2 79 aa14.62□□□□□ -0.07
ATP2C1-224ENST00000533801 SATB2Q9UPW6 733 aa14.62□□□□□ -0.07
ATP2C1-224ENST00000533801 AK6Q9Y3D8 172 aaKnown RBP14.62□□□□□ -0.07
ATP2C1-224ENST00000533801 THADAQ6YHU6 1953 aa14.62□□□□□ -0.07
ATP2C1-224ENST00000533801 METTL12A8MUP2 240 aa14.61□□□□□ -0.07
ATP2C1-224ENST00000533801 SBK2P0C263 348 aa14.61□□□□□ -0.07
ATP2C1-224ENST00000533801 FOLR1P15328 257 aa14.61□□□□□ -0.07
ATP2C1-224ENST00000533801 NME1P15531 152 aaKnown RBP14.61□□□□□ -0.07
ATP2C1-224ENST00000533801 MYL9P24844 172 aa14.61□□□□□ -0.07
ATP2C1-224ENST00000533801 MAGEA8P43361 318 aa14.61□□□□□ -0.07
ATP2C1-224ENST00000533801 PON3Q15166 354 aa14.61□□□□□ -0.07
ATP2C1-224ENST00000533801 MARCH3Q86UD3 253 aa14.61□□□□□ -0.07
ATP2C1-224ENST00000533801 SDR16C5Q8N3Y7 309 aa14.61□□□□□ -0.07
ATP2C1-224ENST00000533801 LNX2Q8N448 690 aa14.61□□□□□ -0.07
ATP2C1-224ENST00000533801 CEP76Q8TAP6 659 aa14.61□□□□□ -0.07
ATP2C1-224ENST00000533801 ZNRF4Q8WWF5 429 aa14.61□□□□□ -0.07
ATP2C1-224ENST00000533801 CTHRC1Q96CG8 243 aa14.61□□□□□ -0.07
ATP2C1-224ENST00000533801 TMCO6Q96DC7 493 aa14.61□□□□□ -0.07
ATP2C1-224ENST00000533801 ZDHHC12Q96GR4 267 aa14.61□□□□□ -0.07
ATP2C1-224ENST00000533801 G6PC3Q9BUM1 346 aa14.61□□□□□ -0.07
ATP2C1-224ENST00000533801 BEX1Q9HBH7 125 aa14.61□□□□□ -0.07
ATP2C1-224ENST00000533801 INIPQ9NRY2 104 aa14.61□□□□□ -0.07
ATP2C1-224ENST00000533801 TMEM5Q9Y2B1 443 aa14.61□□□□□ -0.07
ATP2C1-224ENST00000533801 NDUFB2O95178 105 aa14.61□□□□□ -0.07
ATP2C1-224ENST00000533801 PTTG1O95997 202 aa14.61□□□□□ -0.07
ATP2C1-224ENST00000533801 AK1P00568 194 aa14.61□□□□□ -0.07
ATP2C1-224ENST00000533801 IMPDH2P12268 514 aa14.61□□□□□ -0.07
ATP2C1-224ENST00000533801 EFNB1P98172 346 aa14.61□□□□□ -0.07
ATP2C1-224ENST00000533801 GARNL3Q5VVW2 1013 aa14.61□□□□□ -0.07
ATP2C1-224ENST00000533801 C19orf48Q6RUI8 117 aa14.61□□□□□ -0.07
ATP2C1-224ENST00000533801 PAMR1Q6UXH9 720 aa14.61□□□□□ -0.07
ATP2C1-224ENST00000533801 OR6C4Q8NGE1 309 aa14.61□□□□□ -0.07
ATP2C1-224ENST00000533801 MRPL15Q9P015 296 aaKnown RBP14.61□□□□□ -0.07
ATP2C1-224ENST00000533801 FAM240BA0A1B0GVZ2 78 aa14.61□□□□□ -0.07
ATP2C1-224ENST00000533801 KLF4O43474 513 aa14.61□□□□□ -0.07
ATP2C1-224ENST00000533801 CSF3P09919 207 aa14.61□□□□□ -0.07
ATP2C1-224ENST00000533801 RCVRNP35243 200 aa14.61□□□□□ -0.07
ATP2C1-224ENST00000533801 RAB15P59190 212 aa14.61□□□□□ -0.07
ATP2C1-224ENST00000533801 CTXN1P60606 82 aa14.61□□□□□ -0.07
ATP2C1-224ENST00000533801 PRTGQ2VWP7 1150 aa14.61□□□□□ -0.07
ATP2C1-224ENST00000533801 C1QL3Q5VWW1 255 aa14.61□□□□□ -0.07
ATP2C1-224ENST00000533801 PTCRAQ6ISU1 281 aaPredicted RBP14.61□□□□□ -0.07
ATP2C1-224ENST00000533801 ZNF550Q7Z398 422 aa14.61□□□□□ -0.07
ATP2C1-224ENST00000533801 JAZF1Q86VZ6 243 aa14.61□□□□□ -0.07
ATP2C1-224ENST00000533801 ZNF595Q8IYB9 648 aa14.61□□□□□ -0.07
ATP2C1-224ENST00000533801 OR2I1PQ8NGU4 316 aa14.61□□□□□ -0.07
ATP2C1-224ENST00000533801 MOGAT1Q96PD6 335 aa14.61□□□□□ -0.07
ATP2C1-224ENST00000533801 TTYH2Q9BSA4 534 aa14.61□□□□□ -0.07
ATP2C1-224ENST00000533801 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.61□□□□□ -0.07
ATP2C1-224ENST00000533801 SRRQ9GZT4 340 aa14.61□□□□□ -0.07
ATP2C1-224ENST00000533801 NXF2Q9GZY0 626 aaKnown RBP14.61□□□□□ -0.07
ATP2C1-224ENST00000533801 SLC6A5Q9Y345 797 aa14.61□□□□□ -0.07
ATP2C1-224ENST00000533801 A0A087WV48 116 aa14.6□□□□□ -0.07
ATP2C1-224ENST00000533801 FAM221BA6H8Z2 402 aa14.6□□□□□ -0.07
ATP2C1-224ENST00000533801 A6NL46 340 aa14.6□□□□□ -0.07
ATP2C1-224ENST00000533801 NSA2O95478 260 aaKnown RBP14.6□□□□□ -0.07
ATP2C1-224ENST00000533801 CLDN12P56749 244 aa14.6□□□□□ -0.07
ATP2C1-224ENST00000533801 TOMM34Q15785 309 aaPredicted RBP14.6□□□□□ -0.07
ATP2C1-224ENST00000533801 APOOLQ6UXV4 268 aa14.6□□□□□ -0.07
ATP2C1-224ENST00000533801 BRIX1Q8TDN6 353 aaKnown RBP14.6□□□□□ -0.07
ATP2C1-224ENST00000533801 TBL1XR1Q9BZK7 514 aa14.6□□□□□ -0.07
ATP2C1-224ENST00000533801 CPNE5Q9HCH3 593 aa14.6□□□□□ -0.07
ATP2C1-224ENST00000533801 ACOXLQ9NUZ1 547 aa14.6□□□□□ -0.07
ATP2C1-224ENST00000533801 NUFIP1Q9UHK0 495 aaKnown RBP14.6□□□□□ -0.07
ATP2C1-224ENST00000533801 SF3B6Q9Y3B4 125 aaKnown RBP14.6□□□□□ -0.07
ATP2C1-224ENST00000533801 A0A075B6Q4 140 aa14.6□□□□□ -0.07
ATP2C1-224ENST00000533801 ACOD1A6NK06 481 aa14.6□□□□□ -0.07
ATP2C1-224ENST00000533801 RGS9O75916 674 aaPredicted RBP14.6□□□□□ -0.07
ATP2C1-224ENST00000533801 TALDO1P37837 337 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms