RNA–Protein interactions for RNA: ENST00000533562.1

CAPRIN1-213, Transcript of cell cycle associated protein 1, humanhuman

TSL 2

Gene CAPRIN1, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-213ENST00000533562 ETFDHQ16134 617 aa10.97□□□□□ -0.65
CAPRIN1-213ENST00000533562 ABLIM2Q6H8Q1 611 aa10.97□□□□□ -0.65
CAPRIN1-213ENST00000533562 HMGN2P46Q86SG4 172 aa10.97□□□□□ -0.65
CAPRIN1-213ENST00000533562 PEX5LQ8IYB4 626 aa10.97□□□□□ -0.65
CAPRIN1-213ENST00000533562 ZNF440Q8IYI8 595 aa10.97□□□□□ -0.65
CAPRIN1-213ENST00000533562 ZNF433Q8N7K0 673 aaPredicted RBP10.97□□□□□ -0.65
CAPRIN1-213ENST00000533562 MGARPQ8TDB4 240 aa10.97□□□□□ -0.65
CAPRIN1-213ENST00000533562 WDR60Q8WVS4 1066 aa10.97□□□□□ -0.65
CAPRIN1-213ENST00000533562 CNOT9Q92600 299 aaKnown RBP10.97□□□□□ -0.65
CAPRIN1-213ENST00000533562 RADILQ96JH8 1075 aa10.97□□□□□ -0.65
CAPRIN1-213ENST00000533562 NAA11Q9BSU3 229 aaPredicted RBP10.97□□□□□ -0.65
CAPRIN1-213ENST00000533562 SLC38A1Q9H2H9 487 aa10.97□□□□□ -0.65
CAPRIN1-213ENST00000533562 MANSC1Q9H8J5 431 aa10.97□□□□□ -0.65
CAPRIN1-213ENST00000533562 FAIMQ9NVQ4 179 aa10.97□□□□□ -0.65
CAPRIN1-213ENST00000533562 PARPBPQ9NWS1 579 aa10.97□□□□□ -0.65
CAPRIN1-213ENST00000533562 ASB6Q9NWX5 421 aa10.97□□□□□ -0.65
CAPRIN1-213ENST00000533562 NKIRAS1Q9NYS0 192 aa10.97□□□□□ -0.65
CAPRIN1-213ENST00000533562 TMED7-TICAM2A0A0A6YYA0 188 aa10.96□□□□□ -0.65
CAPRIN1-213ENST00000533562 CIB4A0PJX0 185 aa10.96□□□□□ -0.65
CAPRIN1-213ENST00000533562 CFAP73A6NFT4 308 aa10.96□□□□□ -0.65
CAPRIN1-213ENST00000533562 OR5H1A6NKK0 313 aa10.96□□□□□ -0.65
CAPRIN1-213ENST00000533562 CCT8L1PA6NM43 557 aa10.96□□□□□ -0.65
CAPRIN1-213ENST00000533562 ZNF716A6NP11 495 aa10.96□□□□□ -0.65
CAPRIN1-213ENST00000533562 OVOL3O00110 214 aa10.96□□□□□ -0.65
CAPRIN1-213ENST00000533562 FAAHO00519 579 aa10.96□□□□□ -0.65
CAPRIN1-213ENST00000533562 ANP32DO95626 131 aa10.96□□□□□ -0.65
CAPRIN1-213ENST00000533562 CHRM4P08173 479 aa10.96□□□□□ -0.65
CAPRIN1-213ENST00000533562 SOD3P08294 240 aa10.96□□□□□ -0.65
CAPRIN1-213ENST00000533562 DANCRP0C864 163 aa10.96□□□□□ -0.65
CAPRIN1-213ENST00000533562 COX5AP20674 150 aa10.96□□□□□ -0.65
CAPRIN1-213ENST00000533562 TACR3P29371 465 aa10.96□□□□□ -0.65
CAPRIN1-213ENST00000533562 IDUAP35475 653 aa10.96□□□□□ -0.65
CAPRIN1-213ENST00000533562 CDKN2CP42773 168 aa10.96□□□□□ -0.65
CAPRIN1-213ENST00000533562 SLC16A1P53985 500 aa10.96□□□□□ -0.65
CAPRIN1-213ENST00000533562 CBX1P83916 185 aa10.96□□□□□ -0.65
CAPRIN1-213ENST00000533562 H3F3AP84243 136 aa10.96□□□□□ -0.65
CAPRIN1-213ENST00000533562 GSTA3Q16772 222 aa10.96□□□□□ -0.65
CAPRIN1-213ENST00000533562 PDCD4Q53EL6 469 aaKnown RBP10.96□□□□□ -0.65
CAPRIN1-213ENST00000533562 OR7E24Q6IFN5 339 aa10.96□□□□□ -0.65
CAPRIN1-213ENST00000533562 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.96□□□□□ -0.65
CAPRIN1-213ENST00000533562 CCDC103Q8IW40 242 aa10.96□□□□□ -0.65
CAPRIN1-213ENST00000533562 PNPT1Q8TCS8 783 aaKnown RBP10.96□□□□□ -0.65
CAPRIN1-213ENST00000533562 REPIN1Q9BWE0 567 aaKnown RBP10.96□□□□□ -0.65
CAPRIN1-213ENST00000533562 TRIM2Q9C040 744 aa10.96□□□□□ -0.65
CAPRIN1-213ENST00000533562 OR11A1Q9GZK7 315 aa10.96□□□□□ -0.65
CAPRIN1-213ENST00000533562 ALG2Q9H553 416 aa10.96□□□□□ -0.65
CAPRIN1-213ENST00000533562 YY1AP1Q9H869 796 aa10.96□□□□□ -0.65
CAPRIN1-213ENST00000533562 RMND5AQ9H871 391 aa10.96□□□□□ -0.65
CAPRIN1-213ENST00000533562 CISD1Q9NZ45 108 aaKnown RBP10.96□□□□□ -0.65
CAPRIN1-213ENST00000533562 CALML5Q9NZT1 146 aa10.96□□□□□ -0.65
CAPRIN1-213ENST00000533562 P2RX2Q9UBL9 471 aa10.96□□□□□ -0.65
CAPRIN1-213ENST00000533562 OSGIN1Q9UJX0 560 aa10.96□□□□□ -0.65
CAPRIN1-213ENST00000533562 ZNF232Q9UNY5 417 aa10.96□□□□□ -0.65
CAPRIN1-213ENST00000533562 TMED7Q9Y3B3 224 aa10.96□□□□□ -0.65
CAPRIN1-213ENST00000533562 ALPK2Q86TB3 2170 aa10.96□□□□□ -0.66
CAPRIN1-213ENST00000533562 SONP18583 2426 aaKnown RBP10.95□□□□□ -0.66
CAPRIN1-213ENST00000533562 TMEM247A6NEH6 219 aa10.95□□□□□ -0.66
CAPRIN1-213ENST00000533562 AP3D1O14617 1153 aa10.95□□□□□ -0.66
CAPRIN1-213ENST00000533562 ADAM11O75078 769 aa10.95□□□□□ -0.66
CAPRIN1-213ENST00000533562 ERLIN1O75477 346 aa10.95□□□□□ -0.66
CAPRIN1-213ENST00000533562 IGHV3-9P01782 118 aa10.95□□□□□ -0.66
CAPRIN1-213ENST00000533562 C1QCP02747 245 aa10.95□□□□□ -0.66
CAPRIN1-213ENST00000533562 CXCR1P25024 350 aa10.95□□□□□ -0.66
CAPRIN1-213ENST00000533562 EDNRAP25101 427 aa10.95□□□□□ -0.66
CAPRIN1-213ENST00000533562 CRATP43155 626 aa10.95□□□□□ -0.66
CAPRIN1-213ENST00000533562 MAGOHP61326 146 aaKnown RBP10.95□□□□□ -0.66
CAPRIN1-213ENST00000533562 COPZ1P61923 177 aa10.95□□□□□ -0.66
CAPRIN1-213ENST00000533562 PPP2R2BQ00005 443 aa10.95□□□□□ -0.66
CAPRIN1-213ENST00000533562 ZSWIM7Q19AV6 140 aa10.95□□□□□ -0.66
CAPRIN1-213ENST00000533562 CLEC12BQ2HXU8 276 aa10.95□□□□□ -0.66
CAPRIN1-213ENST00000533562 COX20Q5RI15 118 aa10.95□□□□□ -0.66
CAPRIN1-213ENST00000533562 MRPL2Q5T653 305 aaKnown RBP10.95□□□□□ -0.66
CAPRIN1-213ENST00000533562 KLHL17Q6TDP4 642 aa10.95□□□□□ -0.66
CAPRIN1-213ENST00000533562 TMEM108Q6UXF1 575 aa10.95□□□□□ -0.66
CAPRIN1-213ENST00000533562 DEPDC4Q8N2C3 294 aa10.95□□□□□ -0.66
CAPRIN1-213ENST00000533562 KBTBD8Q8NFY9 601 aa10.95□□□□□ -0.66
CAPRIN1-213ENST00000533562 DNAJA3Q96EY1 480 aa10.95□□□□□ -0.66
CAPRIN1-213ENST00000533562 MAELQ96JY0 434 aaKnown RBP10.95□□□□□ -0.66
CAPRIN1-213ENST00000533562 GRIP2Q9C0E4 1043 aa10.95□□□□□ -0.66
CAPRIN1-213ENST00000533562 ARMC7Q9H6L4 198 aa10.95□□□□□ -0.66
CAPRIN1-213ENST00000533562 CACYBPQ9HB71 228 aaKnown RBP10.95□□□□□ -0.66
CAPRIN1-213ENST00000533562 THUMPD1Q9NXG2 353 aaKnown RBP10.95□□□□□ -0.66
CAPRIN1-213ENST00000533562 TAS2R16Q9NYV7 291 aa10.95□□□□□ -0.66
CAPRIN1-213ENST00000533562 ZIM2Q9NZV7 527 aa10.95□□□□□ -0.66
CAPRIN1-213ENST00000533562 MGAT4BQ9UQ53 548 aa10.95□□□□□ -0.66
CAPRIN1-213ENST00000533562 MAGED1Q9Y5V3 778 aaPredicted RBP10.95□□□□□ -0.66
CAPRIN1-213ENST00000533562 ATRQ13535 2644 aa10.94□□□□□ -0.66
CAPRIN1-213ENST00000533562 TMEM72A0PK05 275 aa10.94□□□□□ -0.66
CAPRIN1-213ENST00000533562 CDHR4A6H8M9 788 aa10.94□□□□□ -0.66
CAPRIN1-213ENST00000533562 ABCD4O14678 606 aa10.94□□□□□ -0.66
CAPRIN1-213ENST00000533562 UBDO15205 165 aa10.94□□□□□ -0.66
CAPRIN1-213ENST00000533562 RAMP1O60894 148 aa10.94□□□□□ -0.66
CAPRIN1-213ENST00000533562 RAD51DO75771 328 aa10.94□□□□□ -0.66
CAPRIN1-213ENST00000533562 GPIP06744 558 aa10.94□□□□□ -0.66
CAPRIN1-213ENST00000533562 ZCCHC18P0CG32 403 aa10.94□□□□□ -0.66
CAPRIN1-213ENST00000533562 RPS4Y1P22090 263 aaKnown RBP10.94□□□□□ -0.66
CAPRIN1-213ENST00000533562 CRISP3P54108 245 aa10.94□□□□□ -0.66
CAPRIN1-213ENST00000533562 TGFBR3Q03167 851 aa10.94□□□□□ -0.66
CAPRIN1-213ENST00000533562 PLAURQ03405 335 aa10.94□□□□□ -0.66
CAPRIN1-213ENST00000533562 FAPQ12884 760 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms