RNA–Protein interactions for RNA: ENST00000533096.5

COPB1-209, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-209ENST00000533096 ZNF141Q15928 474 aa11.36□□□□□ -0.59
COPB1-209ENST00000533096 MAPK14Q16539 360 aa11.36□□□□□ -0.59
COPB1-209ENST00000533096 CCDC153Q494R4 210 aa11.36□□□□□ -0.59
COPB1-209ENST00000533096 IL23RQ5VWK5 629 aa11.36□□□□□ -0.59
COPB1-209ENST00000533096 RINLQ6ZS11 566 aa11.36□□□□□ -0.59
COPB1-209ENST00000533096 TUBA1AQ71U36 451 aa11.36□□□□□ -0.59
COPB1-209ENST00000533096 TRMT10CQ7L0Y3 403 aaKnown RBP11.36□□□□□ -0.59
COPB1-209ENST00000533096 AAED1Q7RTV5 226 aa11.36□□□□□ -0.59
COPB1-209ENST00000533096 C3orf56Q8N813 242 aa11.36□□□□□ -0.59
COPB1-209ENST00000533096 LINC01356Q8N9X3 169 aa11.36□□□□□ -0.59
COPB1-209ENST00000533096 RAB8BQ92930 207 aa11.36□□□□□ -0.59
COPB1-209ENST00000533096 ZG16BQ96DA0 208 aa11.36□□□□□ -0.59
COPB1-209ENST00000533096 CCDC106Q9BWC9 280 aa11.36□□□□□ -0.59
COPB1-209ENST00000533096 GATA5Q9BWX5 397 aaPredicted RBP11.36□□□□□ -0.59
COPB1-209ENST00000533096 RAB1BQ9H0U4 201 aa11.36□□□□□ -0.59
COPB1-209ENST00000533096 CA10Q9NS85 328 aa11.36□□□□□ -0.59
COPB1-209ENST00000533096 ATAD3AQ9NVI7 634 aa11.36□□□□□ -0.59
COPB1-209ENST00000533096 HDGFL3Q9Y3E1 203 aa11.36□□□□□ -0.59
COPB1-209ENST00000533096 FLVCR1Q9Y5Y0 555 aa11.36□□□□□ -0.59
COPB1-209ENST00000533096 A0A096LPE4 126 aa11.35□□□□□ -0.59
COPB1-209ENST00000533096 TMED7-TICAM2A0A0A6YYA0 188 aa11.35□□□□□ -0.59
COPB1-209ENST00000533096 IGHV1-18A0A0C4DH31 117 aa11.35□□□□□ -0.59
COPB1-209ENST00000533096 A0A1W2PPZ6 126 aa11.35□□□□□ -0.59
COPB1-209ENST00000533096 DUXAA6NLW8 204 aa11.35□□□□□ -0.59
COPB1-209ENST00000533096 B9A039 149 aa11.35□□□□□ -0.59
COPB1-209ENST00000533096 LYNX1G3V0Z9 82 aa11.35□□□□□ -0.59
COPB1-209ENST00000533096 PDLIM1O00151 329 aa11.35□□□□□ -0.59
COPB1-209ENST00000533096 ETV2O00321 342 aaPredicted RBP11.35□□□□□ -0.59
COPB1-209ENST00000533096 NR5A2O00482 541 aa11.35□□□□□ -0.59
COPB1-209ENST00000533096 ANKRD28O15084 1053 aa11.35□□□□□ -0.59
COPB1-209ENST00000533096 SNUPNO95149 360 aaKnown RBP11.35□□□□□ -0.59
COPB1-209ENST00000533096 VENTXO95231 258 aa11.35□□□□□ -0.59
COPB1-209ENST00000533096 ABHD2P08910 425 aa11.35□□□□□ -0.59
COPB1-209ENST00000533096 OR12D1P0DN82 309 aa11.35□□□□□ -0.59
COPB1-209ENST00000533096 LYNX1P0DP58 116 aa11.35□□□□□ -0.59
COPB1-209ENST00000533096 MAPK1P28482 360 aa11.35□□□□□ -0.59
COPB1-209ENST00000533096 MPGP29372 298 aa11.35□□□□□ -0.59
COPB1-209ENST00000533096 UBE2NP61088 152 aaKnown RBP11.35□□□□□ -0.59
COPB1-209ENST00000533096 HBA1P69905 142 aa11.35□□□□□ -0.59
COPB1-209ENST00000533096 SLC35A1P78382 337 aa11.35□□□□□ -0.59
COPB1-209ENST00000533096 CCNIQ14094 377 aa11.35□□□□□ -0.59
COPB1-209ENST00000533096 ADIPOQQ15848 244 aa11.35□□□□□ -0.59
COPB1-209ENST00000533096 ANKRD16Q6P6B7 361 aa11.35□□□□□ -0.59
COPB1-209ENST00000533096 BHLHB9Q6PI77 547 aa11.35□□□□□ -0.59
COPB1-209ENST00000533096 C17orf78Q8N4C9 275 aa11.35□□□□□ -0.59
COPB1-209ENST00000533096 MZB1Q8WU39 189 aa11.35□□□□□ -0.59
COPB1-209ENST00000533096 TWIST2Q8WVJ9 160 aa11.35□□□□□ -0.59
COPB1-209ENST00000533096 MOAP1Q96BY2 351 aa11.35□□□□□ -0.59
COPB1-209ENST00000533096 COQ8BQ96D53 544 aa11.35□□□□□ -0.59
COPB1-209ENST00000533096 PPP3R2Q96LZ3 170 aa11.35□□□□□ -0.59
COPB1-209ENST00000533096 DUSP26Q9BV47 211 aa11.35□□□□□ -0.59
COPB1-209ENST00000533096 NMUR2Q9GZQ4 415 aa11.35□□□□□ -0.59
COPB1-209ENST00000533096 METTL17Q9H7H0 456 aaPredicted RBP11.35□□□□□ -0.59
COPB1-209ENST00000533096 TMEM45AQ9NWC5 275 aa11.35□□□□□ -0.59
COPB1-209ENST00000533096 DCTN4Q9UJW0 460 aa11.35□□□□□ -0.59
COPB1-209ENST00000533096 SLC9A8Q9Y2E8 581 aa11.35□□□□□ -0.59
COPB1-209ENST00000533096 TMED7Q9Y3B3 224 aa11.35□□□□□ -0.59
COPB1-209ENST00000533096 TMEM72A0PK05 275 aa11.34□□□□□ -0.59
COPB1-209ENST00000533096 CLDN24A6NM45 220 aa11.34□□□□□ -0.59
COPB1-209ENST00000533096 VSTM5A8MXK1 200 aa11.34□□□□□ -0.59
COPB1-209ENST00000533096 COPEO14579 308 aa11.34□□□□□ -0.59
COPB1-209ENST00000533096 DNAJA2O60884 412 aa11.34□□□□□ -0.59
COPB1-209ENST00000533096 SCN2BO60939 215 aa11.34□□□□□ -0.59
COPB1-209ENST00000533096 LILRA1O75019 489 aa11.34□□□□□ -0.59
COPB1-209ENST00000533096 CPSF4O95639 269 aaKnown RBP11.34□□□□□ -0.59
COPB1-209ENST00000533096 LGI1O95970 557 aa11.34□□□□□ -0.59
COPB1-209ENST00000533096 CHRNGP07510 517 aa11.34□□□□□ -0.59
COPB1-209ENST00000533096 FAM153BP0C7A2 387 aa11.34□□□□□ -0.59
COPB1-209ENST00000533096 IMPDH2P12268 514 aa11.34□□□□□ -0.59
COPB1-209ENST00000533096 IFNGR1P15260 489 aa11.34□□□□□ -0.59
COPB1-209ENST00000533096 CRHR1P34998 444 aa11.34□□□□□ -0.59
COPB1-209ENST00000533096 PGM1P36871 562 aa11.34□□□□□ -0.59
COPB1-209ENST00000533096 IDH3GP51553 393 aaPredicted RBP11.34□□□□□ -0.59
COPB1-209ENST00000533096 SLC16A1P53985 500 aa11.34□□□□□ -0.59
COPB1-209ENST00000533096 LGALS3BPQ08380 585 aa11.34□□□□□ -0.59
COPB1-209ENST00000533096 TRIP10Q15642 601 aa11.34□□□□□ -0.59
COPB1-209ENST00000533096 WHAMMP3Q1A5X7 153 aa11.34□□□□□ -0.59
COPB1-209ENST00000533096 ARHGAP11BQ3KRB8 267 aa11.34□□□□□ -0.59
COPB1-209ENST00000533096 FAM153CQ494X1 144 aa11.34□□□□□ -0.59
COPB1-209ENST00000533096 KANK2Q63ZY3 851 aa11.34□□□□□ -0.59
COPB1-209ENST00000533096 TMEM225Q6GV28 225 aa11.34□□□□□ -0.59
COPB1-209ENST00000533096 THSD4Q6ZMP0 1018 aa11.34□□□□□ -0.59
COPB1-209ENST00000533096 ZCCHC23Q6ZST2 131 aa11.34□□□□□ -0.59
COPB1-209ENST00000533096 GRINAQ7Z429 371 aa11.34□□□□□ -0.59
COPB1-209ENST00000533096 GPAT4Q86UL3 456 aa11.34□□□□□ -0.59
COPB1-209ENST00000533096 MEX3DQ86XN8 651 aaKnown RBP11.34□□□□□ -0.59
COPB1-209ENST00000533096 CLECL1Q8IZS7 167 aa11.34□□□□□ -0.59
COPB1-209ENST00000533096 ARFGAP2Q8N6H7 521 aa11.34□□□□□ -0.59
COPB1-209ENST00000533096 FNDC5Q8NAU1 212 aa11.34□□□□□ -0.59
COPB1-209ENST00000533096 C1orf162Q8NEQ5 155 aaPredicted RBP11.34□□□□□ -0.59
COPB1-209ENST00000533096 CNOT9Q92600 299 aaKnown RBP11.34□□□□□ -0.59
COPB1-209ENST00000533096 GCDHQ92947 438 aaPredicted RBP11.34□□□□□ -0.59
COPB1-209ENST00000533096 DDIT4LQ96D03 193 aa11.34□□□□□ -0.59
COPB1-209ENST00000533096 ZNF385AQ96PM9 386 aaKnown RBP11.34□□□□□ -0.59
COPB1-209ENST00000533096 SLC38A2Q96QD8 506 aa11.34□□□□□ -0.59
COPB1-209ENST00000533096 OR51I1Q9H343 314 aa11.34□□□□□ -0.59
COPB1-209ENST00000533096 SERHL2Q9H4I8 314 aa11.34□□□□□ -0.59
COPB1-209ENST00000533096 LPAR2Q9HBW0 351 aa11.34□□□□□ -0.59
COPB1-209ENST00000533096 MYOZ1Q9NP98 299 aaPredicted RBP11.34□□□□□ -0.59
COPB1-209ENST00000533096 EXD2Q9NVH0 621 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms