RNA–Protein interactions for RNA: ENST00000532550.1

PHRF1-204, Transcript of PHD and ring finger domains 1, humanhuman

TSL 3

Gene PHRF1, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-204ENST00000532550 TMEM72A0PK05 275 aa15.28■□□□□ 0.04
PHRF1-204ENST00000532550 GPR171O14626 319 aa15.28■□□□□ 0.04
PHRF1-204ENST00000532550 EIF1BO60739 113 aaKnown RBP15.28■□□□□ 0.04
PHRF1-204ENST00000532550 THBS1P07996 1170 aa15.28■□□□□ 0.04
PHRF1-204ENST00000532550 NUDT7P0C024 238 aa15.28■□□□□ 0.04
PHRF1-204ENST00000532550 NCF2P19878 526 aaPredicted RBP15.28■□□□□ 0.04
PHRF1-204ENST00000532550 PPIBP23284 216 aaKnown RBP15.28■□□□□ 0.04
PHRF1-204ENST00000532550 ATP4BP51164 291 aa15.28■□□□□ 0.04
PHRF1-204ENST00000532550 SLC35A1P78382 337 aa15.28■□□□□ 0.04
PHRF1-204ENST00000532550 SQLEQ14534 574 aa15.28■□□□□ 0.04
PHRF1-204ENST00000532550 TSC22D1Q15714 1073 aa15.28■□□□□ 0.04
PHRF1-204ENST00000532550 ZNF311Q5JNZ3 666 aa15.28■□□□□ 0.04
PHRF1-204ENST00000532550 LRIF1Q5T3J3 769 aa15.28■□□□□ 0.04
PHRF1-204ENST00000532550 RNF220Q5VTB9 566 aa15.28■□□□□ 0.04
PHRF1-204ENST00000532550 PRAMEF8Q5VWM4 474 aa15.28■□□□□ 0.04
PHRF1-204ENST00000532550 PRAMEF7Q5VXH5 474 aa15.28■□□□□ 0.04
PHRF1-204ENST00000532550 WBP2NLQ6ICG8 309 aa15.28■□□□□ 0.04
PHRF1-204ENST00000532550 BHLHA15Q7RTS1 189 aaPredicted RBP15.28■□□□□ 0.04
PHRF1-204ENST00000532550 CLIP4Q8N3C7 705 aa15.28■□□□□ 0.04
PHRF1-204ENST00000532550 CADM2Q8N3J6 435 aa15.28■□□□□ 0.04
PHRF1-204ENST00000532550 PIGXQ8TBF5 258 aa15.28■□□□□ 0.04
PHRF1-204ENST00000532550 MAL2Q969L2 176 aa15.28■□□□□ 0.04
PHRF1-204ENST00000532550 PLPPR2Q96GM1 343 aa15.28■□□□□ 0.04
PHRF1-204ENST00000532550 HS3ST6Q96QI5 342 aa15.28■□□□□ 0.04
PHRF1-204ENST00000532550 NAA11Q9BSU3 229 aaPredicted RBP15.28■□□□□ 0.04
PHRF1-204ENST00000532550 TMUB1Q9BVT8 246 aa15.28■□□□□ 0.04
PHRF1-204ENST00000532550 SPATA9Q9BWV2 254 aa15.28■□□□□ 0.04
PHRF1-204ENST00000532550 BCL2L10Q9HD36 194 aa15.28■□□□□ 0.04
PHRF1-204ENST00000532550 A4GALTQ9NPC4 353 aa15.28■□□□□ 0.04
PHRF1-204ENST00000532550 NGBQ9NPG2 151 aa15.28■□□□□ 0.04
PHRF1-204ENST00000532550 SLAMF8Q9P0V8 285 aa15.28■□□□□ 0.04
PHRF1-204ENST00000532550 PRSS50Q9UI38 385 aa15.28■□□□□ 0.04
PHRF1-204ENST00000532550 NOSIPQ9Y314 301 aaKnown RBP15.28■□□□□ 0.04
PHRF1-204ENST00000532550 CNOT4O95628 575 aaKnown RBP15.27■□□□□ 0.04
PHRF1-204ENST00000532550 BMP2P12643 396 aa15.27■□□□□ 0.04
PHRF1-204ENST00000532550 LOXP28300 417 aaPredicted RBP15.27■□□□□ 0.04
PHRF1-204ENST00000532550 ACAA2P42765 397 aaKnown RBP15.27■□□□□ 0.04
PHRF1-204ENST00000532550 ADAM8P78325 824 aa15.27■□□□□ 0.04
PHRF1-204ENST00000532550 PAGE3Q5JUK9 113 aa15.27■□□□□ 0.04
PHRF1-204ENST00000532550 ABLIM2Q6H8Q1 611 aa15.27■□□□□ 0.04
PHRF1-204ENST00000532550 CCDC103Q8IW40 242 aa15.27■□□□□ 0.04
PHRF1-204ENST00000532550 BBS10Q8TAM1 723 aa15.27■□□□□ 0.04
PHRF1-204ENST00000532550 THOC1Q96FV9 657 aaKnown RBP15.27■□□□□ 0.04
PHRF1-204ENST00000532550 POTEKPQ9BYX7 375 aa15.27■□□□□ 0.04
PHRF1-204ENST00000532550 SLC52A3Q9NQ40 469 aa15.27■□□□□ 0.04
PHRF1-204ENST00000532550 SLC25A37Q9NYZ2 338 aa15.27■□□□□ 0.04
PHRF1-204ENST00000532550 A0A1W2PP18 115 aa15.26■□□□□ 0.03
PHRF1-204ENST00000532550 ZNF716A6NP11 495 aa15.26■□□□□ 0.03
PHRF1-204ENST00000532550 EVPLLA8MZ36 301 aa15.26■□□□□ 0.03
PHRF1-204ENST00000532550 MRPL33O75394 65 aaKnown RBP15.26■□□□□ 0.03
PHRF1-204ENST00000532550 PGM3O95394 542 aa15.26■□□□□ 0.03
PHRF1-204ENST00000532550 IMPDH2P12268 514 aa15.26■□□□□ 0.03
PHRF1-204ENST00000532550 HOXB9P17482 250 aaPredicted RBP15.26■□□□□ 0.03
PHRF1-204ENST00000532550 H3F3AP84243 136 aa15.26■□□□□ 0.03
PHRF1-204ENST00000532550 CAPRIN1Q14444 709 aaKnown RBP15.26■□□□□ 0.03
PHRF1-204ENST00000532550 TAB1Q15750 504 aa15.26■□□□□ 0.03
PHRF1-204ENST00000532550 C20orf204Q6ZNR8 217 aa15.26■□□□□ 0.03
PHRF1-204ENST00000532550 ZC3HAV1Q7Z2W4 902 aaKnown RBP15.26■□□□□ 0.03
PHRF1-204ENST00000532550 UBE2J2Q8N2K1 259 aa15.26■□□□□ 0.03
PHRF1-204ENST00000532550 PIP5K1AQ99755 562 aa15.26■□□□□ 0.03
PHRF1-204ENST00000532550 DCTN4Q9UJW0 460 aa15.26■□□□□ 0.03
PHRF1-204ENST00000532550 TRIM33Q9UPN9 1127 aa15.26■□□□□ 0.03
PHRF1-204ENST00000532550 CORO2BQ9UQ03 480 aa15.26■□□□□ 0.03
PHRF1-204ENST00000532550 MTORP42345 2549 aa15.25■□□□□ 0.03
PHRF1-204ENST00000532550 ACANP16112 2415 aa15.25■□□□□ 0.03
PHRF1-204ENST00000532550 ZC3H12DA2A288 527 aaKnown RBP15.25■□□□□ 0.03
PHRF1-204ENST00000532550 ARHGEF9O43307 516 aa15.25■□□□□ 0.03
PHRF1-204ENST00000532550 SMPD2O60906 423 aa15.25■□□□□ 0.03
PHRF1-204ENST00000532550 LYZL6O75951 148 aa15.25■□□□□ 0.03
PHRF1-204ENST00000532550 GPIP06744 558 aa15.25■□□□□ 0.03
PHRF1-204ENST00000532550 PRG2P13727 222 aa15.25■□□□□ 0.03
PHRF1-204ENST00000532550 ETS2P15036 469 aa15.25■□□□□ 0.03
PHRF1-204ENST00000532550 IDUAP35475 653 aa15.25■□□□□ 0.03
PHRF1-204ENST00000532550 SLC16A1P53985 500 aa15.25■□□□□ 0.03
PHRF1-204ENST00000532550 NKX6-1P78426 367 aaPredicted RBP15.25■□□□□ 0.03
PHRF1-204ENST00000532550 GCNT6Q5T4J0 391 aa15.25■□□□□ 0.03
PHRF1-204ENST00000532550 FBXW9Q5XUX1 488 aa15.25■□□□□ 0.03
PHRF1-204ENST00000532550 ZNF704Q6ZNC4 412 aaPredicted RBP15.25■□□□□ 0.03
PHRF1-204ENST00000532550 P3H2Q8IVL5 708 aa15.25■□□□□ 0.03
PHRF1-204ENST00000532550 MSRB3Q8IXL7 192 aa15.25■□□□□ 0.03
PHRF1-204ENST00000532550 STON2Q8WXE9 905 aa15.25■□□□□ 0.03
PHRF1-204ENST00000532550 APH1AQ96BI3 265 aa15.25■□□□□ 0.03
PHRF1-204ENST00000532550 MUCL1Q96DR8 90 aa15.25■□□□□ 0.03
PHRF1-204ENST00000532550 CCL19Q99731 98 aa15.25■□□□□ 0.03
PHRF1-204ENST00000532550 SIKE1Q9BRV8 207 aa15.25■□□□□ 0.03
PHRF1-204ENST00000532550 ESRP2Q9H6T0 727 aaKnown RBP15.25■□□□□ 0.03
PHRF1-204ENST00000532550 NPHS2Q9NP85 383 aa15.25■□□□□ 0.03
PHRF1-204ENST00000532550 PARPBPQ9NWS1 579 aa15.25■□□□□ 0.03
PHRF1-204ENST00000532550 VAPAQ9P0L0 249 aa15.25■□□□□ 0.03
PHRF1-204ENST00000532550 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.25■□□□□ 0.03
PHRF1-204ENST00000532550 CHST2Q9Y4C5 530 aa15.25■□□□□ 0.03
PHRF1-204ENST00000532550 A8MVM7 634 aa15.24■□□□□ 0.03
PHRF1-204ENST00000532550 EDF1O60869 148 aaKnown RBP15.24■□□□□ 0.03
PHRF1-204ENST00000532550 SASH3O75995 380 aa15.24■□□□□ 0.03
PHRF1-204ENST00000532550 IGHV3-9P01782 118 aa15.24■□□□□ 0.03
PHRF1-204ENST00000532550 ARAFP10398 606 aa15.24■□□□□ 0.03
PHRF1-204ENST00000532550 EDNRAP25101 427 aa15.24■□□□□ 0.03
PHRF1-204ENST00000532550 CDK6Q00534 326 aa15.24■□□□□ 0.03
PHRF1-204ENST00000532550 FOXD4Q12950 439 aaPredicted RBP15.24■□□□□ 0.03
PHRF1-204ENST00000532550 BNIP2Q12982 314 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms