RNA–Protein interactions for RNA: ENST00000532538.1

BRPF3-210, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 4

Gene BRPF3, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-210ENST00000532538 POLE3Q9NRF9 147 aa13.35□□□□□ -0.27
BRPF3-210ENST00000532538 SLC9A8Q9Y2E8 581 aa13.35□□□□□ -0.27
BRPF3-210ENST00000532538 AMDHD2Q9Y303 409 aa13.35□□□□□ -0.27
BRPF3-210ENST00000532538 TMED7Q9Y3B3 224 aa13.35□□□□□ -0.27
BRPF3-210ENST00000532538 DNHD1Q96M86 4753 aa13.34□□□□□ -0.27
BRPF3-210ENST00000532538 ARFGEF3Q5TH69 2177 aa13.34□□□□□ -0.27
BRPF3-210ENST00000532538 PRSS51A0A1B0GVH4 220 aa13.34□□□□□ -0.27
BRPF3-210ENST00000532538 DNPH1O43598 174 aa13.34□□□□□ -0.27
BRPF3-210ENST00000532538 EIF1BO60739 113 aaKnown RBP13.34□□□□□ -0.27
BRPF3-210ENST00000532538 DNAJA2O60884 412 aa13.34□□□□□ -0.27
BRPF3-210ENST00000532538 SCN2BO60939 215 aa13.34□□□□□ -0.27
BRPF3-210ENST00000532538 WNT11O96014 354 aa13.34□□□□□ -0.27
BRPF3-210ENST00000532538 THBS1P07996 1170 aa13.34□□□□□ -0.27
BRPF3-210ENST00000532538 ITGA5P08648 1049 aa13.34□□□□□ -0.27
BRPF3-210ENST00000532538 CSF3P09919 207 aa13.34□□□□□ -0.27
BRPF3-210ENST00000532538 NUDT17P0C025 328 aa13.34□□□□□ -0.27
BRPF3-210ENST00000532538 ZNF16P17020 682 aaPredicted RBP13.34□□□□□ -0.27
BRPF3-210ENST00000532538 APOBEC3AP31941 199 aaPredicted RBP13.34□□□□□ -0.27
BRPF3-210ENST00000532538 ARRB2P32121 409 aa13.34□□□□□ -0.27
BRPF3-210ENST00000532538 S100A3P33764 101 aa13.34□□□□□ -0.27
BRPF3-210ENST00000532538 ANXA11P50995 505 aaKnown RBP13.34□□□□□ -0.27
BRPF3-210ENST00000532538 POLR2HP52434 150 aaKnown RBP13.34□□□□□ -0.27
BRPF3-210ENST00000532538 FOXG1P55316 489 aaPredicted RBP13.34□□□□□ -0.27
BRPF3-210ENST00000532538 PRPS1P60891 318 aa13.34□□□□□ -0.27
BRPF3-210ENST00000532538 LOXL1Q08397 574 aaPredicted RBP13.34□□□□□ -0.27
BRPF3-210ENST00000532538 GNA13Q14344 377 aa13.34□□□□□ -0.27
BRPF3-210ENST00000532538 C11orf71Q6IPW1 123 aa13.34□□□□□ -0.27
BRPF3-210ENST00000532538 B3GLCTQ6Y288 498 aa13.34□□□□□ -0.27
BRPF3-210ENST00000532538 FRRS1Q6ZNA5 592 aa13.34□□□□□ -0.27
BRPF3-210ENST00000532538 ADGRG3Q86Y34 549 aa13.34□□□□□ -0.27
BRPF3-210ENST00000532538 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.34□□□□□ -0.27
BRPF3-210ENST00000532538 PMM1Q92871 262 aa13.34□□□□□ -0.27
BRPF3-210ENST00000532538 C3orf49Q96BT1 292 aa13.34□□□□□ -0.27
BRPF3-210ENST00000532538 PKNOX2Q96KN3 472 aa13.34□□□□□ -0.27
BRPF3-210ENST00000532538 MUS81Q96NY9 551 aa13.34□□□□□ -0.27
BRPF3-210ENST00000532538 AKTIPQ9H8T0 292 aa13.34□□□□□ -0.27
BRPF3-210ENST00000532538 CHODLQ9H9P2 273 aa13.34□□□□□ -0.27
BRPF3-210ENST00000532538 LPAR3Q9UBY5 353 aa13.34□□□□□ -0.27
BRPF3-210ENST00000532538 MALT1Q9UDY8 824 aa13.34□□□□□ -0.27
BRPF3-210ENST00000532538 FKBP7Q9Y680 259 aa13.34□□□□□ -0.27
BRPF3-210ENST00000532538 MALRD1Q5VYJ5 2156 aa13.34□□□□□ -0.27
BRPF3-210ENST00000532538 TMEM72A0PK05 275 aa13.33□□□□□ -0.28
BRPF3-210ENST00000532538 CLDN24A6NM45 220 aa13.33□□□□□ -0.28
BRPF3-210ENST00000532538 BCAS1O75363 584 aaPredicted RBP13.33□□□□□ -0.28
BRPF3-210ENST00000532538 MYZAPP0CAP1 466 aa13.33□□□□□ -0.28
BRPF3-210ENST00000532538 IL7RP16871 459 aa13.33□□□□□ -0.28
BRPF3-210ENST00000532538 USF1P22415 310 aaPredicted RBP13.33□□□□□ -0.28
BRPF3-210ENST00000532538 TACR3P29371 465 aa13.33□□□□□ -0.28
BRPF3-210ENST00000532538 EFNA4P52798 201 aa13.33□□□□□ -0.28
BRPF3-210ENST00000532538 CLNS1AP54105 237 aaKnown RBP13.33□□□□□ -0.28
BRPF3-210ENST00000532538 NME5P56597 212 aa13.33□□□□□ -0.28
BRPF3-210ENST00000532538 LSM11P83369 360 aaKnown RBP eCLIP13.33□□□□□ -0.28
BRPF3-210ENST00000532538 VLDLRP98155 873 aa13.33□□□□□ -0.28
BRPF3-210ENST00000532538 GGTLC2Q14390 218 aa13.33□□□□□ -0.28
BRPF3-210ENST00000532538 CHI3L2Q15782 390 aa13.33□□□□□ -0.28
BRPF3-210ENST00000532538 SMU1Q2TAY7 513 aa13.33□□□□□ -0.28
BRPF3-210ENST00000532538 IQCCQ4KMZ1 466 aa13.33□□□□□ -0.28
BRPF3-210ENST00000532538 OTUD3Q5T2D3 398 aaPredicted RBP13.33□□□□□ -0.28
BRPF3-210ENST00000532538 EMBQ6PCB8 327 aa13.33□□□□□ -0.28
BRPF3-210ENST00000532538 GPAT4Q86UL3 456 aa13.33□□□□□ -0.28
BRPF3-210ENST00000532538 TRIML2Q8N7C3 387 aa13.33□□□□□ -0.28
BRPF3-210ENST00000532538 ZNF781Q8N8C0 355 aa13.33□□□□□ -0.28
BRPF3-210ENST00000532538 OR8J2Q8NGG1 315 aa13.33□□□□□ -0.28
BRPF3-210ENST00000532538 MIPOL1Q8TD10 442 aa13.33□□□□□ -0.28
BRPF3-210ENST00000532538 WDR60Q8WVS4 1066 aa13.33□□□□□ -0.28
BRPF3-210ENST00000532538 OIT3Q8WWZ8 545 aa13.33□□□□□ -0.28
BRPF3-210ENST00000532538 NANOS1Q8WY41 292 aaKnown RBP13.33□□□□□ -0.28
BRPF3-210ENST00000532538 CNOT9Q92600 299 aaKnown RBP13.33□□□□□ -0.28
BRPF3-210ENST00000532538 ZG16BQ96DA0 208 aa13.33□□□□□ -0.28
BRPF3-210ENST00000532538 VRK1Q99986 396 aaPredicted RBP13.33□□□□□ -0.28
BRPF3-210ENST00000532538 SLC17A5Q9NRA2 495 aa13.33□□□□□ -0.28
BRPF3-210ENST00000532538 SLC7A10Q9NS82 523 aa13.33□□□□□ -0.28
BRPF3-210ENST00000532538 DCTN4Q9UJW0 460 aa13.33□□□□□ -0.28
BRPF3-210ENST00000532538 MOKQ9UQ07 419 aa13.33□□□□□ -0.28
BRPF3-210ENST00000532538 TRAPPC4Q9Y296 219 aa13.33□□□□□ -0.28
BRPF3-210ENST00000532538 FLVCR1Q9Y5Y0 555 aa13.33□□□□□ -0.28
BRPF3-210ENST00000532538 GOLGA8QA0A0J9YX86 632 aa13.32□□□□□ -0.28
BRPF3-210ENST00000532538 GOLGA8OA6NCC3 632 aa13.32□□□□□ -0.28
BRPF3-210ENST00000532538 ELOA3DA6NLF2 546 aaPredicted RBP13.32□□□□□ -0.28
BRPF3-210ENST00000532538 ATP6V1G2-DDX39BF2Z307 99 aa13.32□□□□□ -0.28
BRPF3-210ENST00000532538 GOLGA8NF8WBI6 632 aa13.32□□□□□ -0.28
BRPF3-210ENST00000532538 H7C417 338 aa13.32□□□□□ -0.28
BRPF3-210ENST00000532538 AP3D1O14617 1153 aa13.32□□□□□ -0.28
BRPF3-210ENST00000532538 KLF11O14901 512 aa13.32□□□□□ -0.28
BRPF3-210ENST00000532538 ITM2AO43736 263 aa13.32□□□□□ -0.28
BRPF3-210ENST00000532538 LMX1BO60663 402 aa13.32□□□□□ -0.28
BRPF3-210ENST00000532538 LY6HO94772 140 aa13.32□□□□□ -0.28
BRPF3-210ENST00000532538 NR2F1P10589 423 aa13.32□□□□□ -0.28
BRPF3-210ENST00000532538 CREB1P16220 341 aa13.32□□□□□ -0.28
BRPF3-210ENST00000532538 CXCR1P25024 350 aa13.32□□□□□ -0.28
BRPF3-210ENST00000532538 NTF4P34130 210 aa13.32□□□□□ -0.28
BRPF3-210ENST00000532538 PDLIM4P50479 330 aa13.32□□□□□ -0.28
BRPF3-210ENST00000532538 SLC16A1P53985 500 aa13.32□□□□□ -0.28
BRPF3-210ENST00000532538 ABCE1P61221 599 aaKnown RBP13.32□□□□□ -0.28
BRPF3-210ENST00000532538 SNRPD2P62316 118 aaKnown RBP13.32□□□□□ -0.28
BRPF3-210ENST00000532538 PHC1P78364 1004 aa13.32□□□□□ -0.28
BRPF3-210ENST00000532538 OR7A5Q15622 319 aa13.32□□□□□ -0.28
BRPF3-210ENST00000532538 ELOA3BQ3SY89 546 aa13.32□□□□□ -0.28
BRPF3-210ENST00000532538 SPANXN4Q5MJ08 99 aa13.32□□□□□ -0.28
BRPF3-210ENST00000532538 TSPO2Q5TGU0 170 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms