RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 DTX2Q86UW9 622 aa14.83□□□□□ -0.04
CPSF1-207ENST00000531727 CCDC103Q8IW40 242 aa14.83□□□□□ -0.04
CPSF1-207ENST00000531727 ANKRD42Q8N9B4 389 aa14.83□□□□□ -0.04
CPSF1-207ENST00000531727 PMM1Q92871 262 aa14.83□□□□□ -0.04
CPSF1-207ENST00000531727 DDIT4LQ96D03 193 aa14.83□□□□□ -0.04
CPSF1-207ENST00000531727 RADILQ96JH8 1075 aa14.83□□□□□ -0.04
CPSF1-207ENST00000531727 ZBTB18Q99592 522 aa14.83□□□□□ -0.04
CPSF1-207ENST00000531727 TRAF4Q9BUZ4 470 aaPredicted RBP14.83□□□□□ -0.04
CPSF1-207ENST00000531727 ALG2Q9H553 416 aa14.83□□□□□ -0.04
CPSF1-207ENST00000531727 MTHFD2LQ9H903 347 aaPredicted RBP14.83□□□□□ -0.04
CPSF1-207ENST00000531727 FAIMQ9NVQ4 179 aa14.83□□□□□ -0.04
CPSF1-207ENST00000531727 ASB6Q9NWX5 421 aa14.83□□□□□ -0.04
CPSF1-207ENST00000531727 MALT1Q9UDY8 824 aa14.83□□□□□ -0.04
CPSF1-207ENST00000531727 OSGIN1Q9UJX0 560 aa14.83□□□□□ -0.04
CPSF1-207ENST00000531727 TMED7Q9Y3B3 224 aa14.83□□□□□ -0.04
CPSF1-207ENST00000531727 CIB4A0PJX0 185 aa14.82□□□□□ -0.04
CPSF1-207ENST00000531727 TMEM72A0PK05 275 aa14.82□□□□□ -0.04
CPSF1-207ENST00000531727 CCT8L1PA6NM43 557 aa14.82□□□□□ -0.04
CPSF1-207ENST00000531727 HDAC3O15379 428 aa14.82□□□□□ -0.04
CPSF1-207ENST00000531727 ZNF208O43345 1280 aa14.82□□□□□ -0.04
CPSF1-207ENST00000531727 MRPL33O75394 65 aaKnown RBP14.82□□□□□ -0.04
CPSF1-207ENST00000531727 CD8AP01732 235 aa14.82□□□□□ -0.04
CPSF1-207ENST00000531727 GSNP06396 782 aa14.82□□□□□ -0.04
CPSF1-207ENST00000531727 NR2F1P10589 423 aa14.82□□□□□ -0.04
CPSF1-207ENST00000531727 IL7RP16871 459 aa14.82□□□□□ -0.04
CPSF1-207ENST00000531727 EPHA3P29320 983 aa14.82□□□□□ -0.04
CPSF1-207ENST00000531727 ACVR1BP36896 505 aa14.82□□□□□ -0.04
CPSF1-207ENST00000531727 WDR4P57081 412 aaKnown RBP14.82□□□□□ -0.04
CPSF1-207ENST00000531727 SLC35A1P78382 337 aa14.82□□□□□ -0.04
CPSF1-207ENST00000531727 H3F3AP84243 136 aa14.82□□□□□ -0.04
CPSF1-207ENST00000531727 KRTAP1-1Q07627 177 aa14.82□□□□□ -0.04
CPSF1-207ENST00000531727 COX20Q5RI15 118 aa14.82□□□□□ -0.04
CPSF1-207ENST00000531727 GLB1L3Q8NCI6 653 aaPredicted RBP14.82□□□□□ -0.04
CPSF1-207ENST00000531727 PNPT1Q8TCS8 783 aaKnown RBP14.82□□□□□ -0.04
CPSF1-207ENST00000531727 SLCO5A1Q9H2Y9 848 aa14.82□□□□□ -0.04
CPSF1-207ENST00000531727 WDR55Q9H6Y2 383 aaPredicted RBP14.82□□□□□ -0.04
CPSF1-207ENST00000531727 THAP1Q9NVV9 213 aa14.82□□□□□ -0.04
CPSF1-207ENST00000531727 TAS2R16Q9NYV7 291 aa14.82□□□□□ -0.04
CPSF1-207ENST00000531727 SLC25A15Q9Y619 301 aa14.82□□□□□ -0.04
CPSF1-207ENST00000531727 CFAP73A6NFT4 308 aa14.81□□□□□ -0.04
CPSF1-207ENST00000531727 TRPC5OSA6NMA1 111 aa14.81□□□□□ -0.04
CPSF1-207ENST00000531727 EIF1BO60739 113 aaKnown RBP14.81□□□□□ -0.04
CPSF1-207ENST00000531727 SNNO75324 88 aaPredicted RBP14.81□□□□□ -0.04
CPSF1-207ENST00000531727 KRT75O95678 551 aa14.81□□□□□ -0.04
CPSF1-207ENST00000531727 IGHV4-39P01824 125 aa14.81□□□□□ -0.04
CPSF1-207ENST00000531727 DBIP07108 87 aaKnown RBP14.81□□□□□ -0.04
CPSF1-207ENST00000531727 IMPDH2P12268 514 aa14.81□□□□□ -0.04
CPSF1-207ENST00000531727 UQCRBP14927 111 aa14.81□□□□□ -0.04
CPSF1-207ENST00000531727 TACR3P29371 465 aa14.81□□□□□ -0.04
CPSF1-207ENST00000531727 SLC1A3P43003 542 aa14.81□□□□□ -0.04
CPSF1-207ENST00000531727 MAP2K6P52564 334 aa14.81□□□□□ -0.04
CPSF1-207ENST00000531727 EPS8Q12929 822 aa14.81□□□□□ -0.04
CPSF1-207ENST00000531727 MRPL2Q5T653 305 aaKnown RBP14.81□□□□□ -0.04
CPSF1-207ENST00000531727 TMEM108Q6UXF1 575 aa14.81□□□□□ -0.04
CPSF1-207ENST00000531727 MAPK1IP1LQ8NDC0 245 aa14.81□□□□□ -0.04
CPSF1-207ENST00000531727 OR52N5Q8NH56 324 aa14.81□□□□□ -0.04
CPSF1-207ENST00000531727 NAA11Q9BSU3 229 aaPredicted RBP14.81□□□□□ -0.04
CPSF1-207ENST00000531727 REG4Q9BYZ8 158 aa14.81□□□□□ -0.04
CPSF1-207ENST00000531727 MGAT4BQ9UQ53 548 aa14.81□□□□□ -0.04
CPSF1-207ENST00000531727 FLVCR1Q9Y5Y0 555 aa14.81□□□□□ -0.04
CPSF1-207ENST00000531727 TMEM120BA0PK00 339 aa14.8□□□□□ -0.04
CPSF1-207ENST00000531727 ZC3H12DA2A288 527 aaKnown RBP14.8□□□□□ -0.04
CPSF1-207ENST00000531727 RFXANKO14593 260 aa14.8□□□□□ -0.04
CPSF1-207ENST00000531727 ITGA5P08648 1049 aa14.8□□□□□ -0.04
CPSF1-207ENST00000531727 IDO1P14902 403 aa14.8□□□□□ -0.04
CPSF1-207ENST00000531727 PTAFRP25105 342 aa14.8□□□□□ -0.04
CPSF1-207ENST00000531727 ZNF83P51522 516 aa14.8□□□□□ -0.04
CPSF1-207ENST00000531727 FOXG1P55316 489 aaPredicted RBP14.8□□□□□ -0.04
CPSF1-207ENST00000531727 MAPK11Q15759 364 aa14.8□□□□□ -0.04
CPSF1-207ENST00000531727 GABRA6Q16445 453 aa14.8□□□□□ -0.04
CPSF1-207ENST00000531727 PDCD4Q53EL6 469 aaKnown RBP14.8□□□□□ -0.04
CPSF1-207ENST00000531727 OR7E24Q6IFN5 339 aa14.8□□□□□ -0.04
CPSF1-207ENST00000531727 KLHL17Q6TDP4 642 aa14.8□□□□□ -0.04
CPSF1-207ENST00000531727 CASP12Q6UXS9 341 aa14.8□□□□□ -0.04
CPSF1-207ENST00000531727 DNM1P46Q6ZS02 220 aa14.8□□□□□ -0.04
CPSF1-207ENST00000531727 LSRQ86X29 649 aaPredicted RBP14.8□□□□□ -0.04
CPSF1-207ENST00000531727 PEX5LQ8IYB4 626 aa14.8□□□□□ -0.04
CPSF1-207ENST00000531727 ZNF440Q8IYI8 595 aa14.8□□□□□ -0.04
CPSF1-207ENST00000531727 PIAS4Q8N2W9 510 aaPredicted RBP14.8□□□□□ -0.04
CPSF1-207ENST00000531727 OR52E4Q8NGH9 312 aa14.8□□□□□ -0.04
CPSF1-207ENST00000531727 HS6ST2Q96MM7 605 aa14.8□□□□□ -0.04
CPSF1-207ENST00000531727 MUS81Q96NY9 551 aa14.8□□□□□ -0.04
CPSF1-207ENST00000531727 ADAM19Q9H013 955 aa14.8□□□□□ -0.04
CPSF1-207ENST00000531727 BARX1Q9HBU1 254 aaPredicted RBP14.8□□□□□ -0.04
CPSF1-207ENST00000531727 SLC6A13Q9NSD5 602 aa14.8□□□□□ -0.04
CPSF1-207ENST00000531727 GDF2Q9UK05 429 aaPredicted RBP14.8□□□□□ -0.04
CPSF1-207ENST00000531727 PRDM4Q9UKN5 801 aa14.8□□□□□ -0.04
CPSF1-207ENST00000531727 SLC9A8Q9Y2E8 581 aa14.8□□□□□ -0.04
CPSF1-207ENST00000531727 KIAA1324LA8MWY0 1029 aaPredicted RBP14.79□□□□□ -0.04
CPSF1-207ENST00000531727 SLCO1B7G3V0H7 640 aa14.79□□□□□ -0.04
CPSF1-207ENST00000531727 PDLIM1O00151 329 aa14.79□□□□□ -0.04
CPSF1-207ENST00000531727 NDUFS7O75251 213 aa14.79□□□□□ -0.04
CPSF1-207ENST00000531727 SLC22A3O75751 556 aa14.79□□□□□ -0.04
CPSF1-207ENST00000531727 IL6P05231 212 aa14.79□□□□□ -0.04
CPSF1-207ENST00000531727 KITP10721 976 aa14.79□□□□□ -0.04
CPSF1-207ENST00000531727 CR1P17927 2039 aa14.79□□□□□ -0.04
CPSF1-207ENST00000531727 CD40P25942 277 aa14.79□□□□□ -0.04
CPSF1-207ENST00000531727 DMTNQ08495 405 aa14.79□□□□□ -0.04
CPSF1-207ENST00000531727 SLC17A1Q14916 467 aa14.79□□□□□ -0.04
CPSF1-207ENST00000531727 GSTA3Q16772 222 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms