RNA–Protein interactions for RNA: ENST00000531637.5

USP33-217, Transcript of ubiquitin specific peptidase 33, human

TSL 3

Gene USP33, Length 384 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
USP33-217	ENST00000531637	VSIG2	Q96IQ7	327 aa		4.17	□□□□□ -1.74
USP33-217	ENST00000531637	CNDP1	Q96KN2	507 aa		4.17	□□□□□ -1.74
USP33-217	ENST00000531637	GAL3ST1	Q99999	423 aa		4.17	□□□□□ -1.74
USP33-217	ENST00000531637	ROPN1B	Q9BZX4	212 aa	Predicted RBP	4.17	□□□□□ -1.74
USP33-217	ENST00000531637	PTGES2	Q9H7Z7	377 aa		4.17	□□□□□ -1.74
USP33-217	ENST00000531637	VNN3	Q9NY84	501 aa		4.17	□□□□□ -1.74
USP33-217	ENST00000531637	ONECUT1	Q9UBC0	465 aa		4.17	□□□□□ -1.74
USP33-217	ENST00000531637	IFT52	Q9Y366	437 aa		4.17	□□□□□ -1.74
USP33-217	ENST00000531637	SH3TC1	Q8TE82	1336 aa		4.17	□□□□□ -1.74
USP33-217	ENST00000531637	GON4L	Q3T8J9	2241 aa		4.16	□□□□□ -1.74
USP33-217	ENST00000531637		A0A1B0GVL5	298 aa		4.16	□□□□□ -1.74
USP33-217	ENST00000531637	VSTM2B	A6NLU5	285 aa		4.16	□□□□□ -1.74
USP33-217	ENST00000531637	LYPD3	O95274	346 aa		4.16	□□□□□ -1.74
USP33-217	ENST00000531637	OR8U8	P0C7N1	319 aa		4.16	□□□□□ -1.74
USP33-217	ENST00000531637	PSMB1	P20618	241 aa	Known RBP	4.16	□□□□□ -1.74
USP33-217	ENST00000531637	QARS	P47897	775 aa	Known RBP	4.16	□□□□□ -1.74
USP33-217	ENST00000531637	SUCLG1	P53597	346 aa	Known RBP	4.16	□□□□□ -1.74
USP33-217	ENST00000531637	EOGT	Q5NDL2	527 aa		4.16	□□□□□ -1.74
USP33-217	ENST00000531637	OR2A2	Q6IF42	318 aa		4.16	□□□□□ -1.74
USP33-217	ENST00000531637	EGFL6	Q8IUX8	553 aa		4.16	□□□□□ -1.74
USP33-217	ENST00000531637	ZBED8	Q8IZ13	594 aa		4.16	□□□□□ -1.74
USP33-217	ENST00000531637	CD177	Q8N6Q3	437 aa		4.16	□□□□□ -1.74
USP33-217	ENST00000531637	OR9K2	Q8NGE7	335 aa		4.16	□□□□□ -1.74
USP33-217	ENST00000531637	OR56B2P	Q8NGI1	322 aa		4.16	□□□□□ -1.74
USP33-217	ENST00000531637	OR1L4	Q8NGR5	311 aa		4.16	□□□□□ -1.74
USP33-217	ENST00000531637	OR56B4	Q8NH76	319 aa		4.16	□□□□□ -1.74
USP33-217	ENST00000531637	AKR7L	Q8NHP1	331 aa		4.16	□□□□□ -1.74
USP33-217	ENST00000531637	PAQR8	Q8TEZ7	354 aa		4.16	□□□□□ -1.74
USP33-217	ENST00000531637	ST8SIA1	Q92185	356 aa		4.16	□□□□□ -1.74
USP33-217	ENST00000531637	ANKRD9	Q96BM1	317 aa	Predicted RBP	4.16	□□□□□ -1.74
USP33-217	ENST00000531637	SLC25A38	Q96DW6	304 aa		4.16	□□□□□ -1.74
USP33-217	ENST00000531637	MTMR9	Q96QG7	549 aa		4.16	□□□□□ -1.74
USP33-217	ENST00000531637	CCDC77	Q9BR77	488 aa		4.16	□□□□□ -1.74
USP33-217	ENST00000531637	RIOK1	Q9BRS2	568 aa	Known RBP	4.16	□□□□□ -1.74
USP33-217	ENST00000531637	RBKS	Q9H477	322 aa		4.16	□□□□□ -1.74
USP33-217	ENST00000531637	ZNF702P	Q9H963	129 aa		4.16	□□□□□ -1.74
USP33-217	ENST00000531637	TM9SF3	Q9HD45	589 aa		4.16	□□□□□ -1.74
USP33-217	ENST00000531637	ETNK2	Q9NVF9	386 aa		4.16	□□□□□ -1.74
USP33-217	ENST00000531637	ZNF639	Q9UID6	485 aa		4.16	□□□□□ -1.74
USP33-217	ENST00000531637	HCFC1	P51610	2035 aa		4.16	□□□□□ -1.74
USP33-217	ENST00000531637	PPIAL4E	A0A075B759	164 aa		4.15	□□□□□ -1.75
USP33-217	ENST00000531637		A0A1W2PQ72	361 aa		4.15	□□□□□ -1.75
USP33-217	ENST00000531637	FAM168B	A1KXE4	195 aa		4.15	□□□□□ -1.75
USP33-217	ENST00000531637	ARHGEF35	A5YM69	484 aa		4.15	□□□□□ -1.75
USP33-217	ENST00000531637	IGHV3-23	P01764	117 aa		4.15	□□□□□ -1.75
USP33-217	ENST00000531637	PPIAL4F	P0DN26	164 aa		4.15	□□□□□ -1.75
USP33-217	ENST00000531637	NCK1	P16333	377 aa		4.15	□□□□□ -1.75
USP33-217	ENST00000531637	RDX	P35241	583 aa	Known RBP	4.15	□□□□□ -1.75
USP33-217	ENST00000531637	TAGLN2	P37802	199 aa	Known RBP	4.15	□□□□□ -1.75
USP33-217	ENST00000531637	DSCR10	P59022	87 aa		4.15	□□□□□ -1.75
USP33-217	ENST00000531637	DMRTC1	Q5HYR2	192 aa		4.15	□□□□□ -1.75
USP33-217	ENST00000531637	ACOT7L	Q6ZUV0	252 aa		4.15	□□□□□ -1.75
USP33-217	ENST00000531637	HSD17B13	Q7Z5P4	300 aa	Predicted RBP	4.15	□□□□□ -1.75
USP33-217	ENST00000531637	PAQR7	Q86WK9	346 aa		4.15	□□□□□ -1.75
USP33-217	ENST00000531637	ZNF677	Q86XU0	584 aa		4.15	□□□□□ -1.75
USP33-217	ENST00000531637	ZNF100	Q8IYN0	542 aa		4.15	□□□□□ -1.75
USP33-217	ENST00000531637	CEP112	Q8N8E3	955 aa		4.15	□□□□□ -1.75
USP33-217	ENST00000531637	CCDC71L	Q8N9Z2	235 aa		4.15	□□□□□ -1.75
USP33-217	ENST00000531637	SLC2A14	Q8TDB8	520 aa		4.15	□□□□□ -1.75
USP33-217	ENST00000531637	DNAJA4	Q8WW22	397 aa	Predicted RBP	4.15	□□□□□ -1.75
USP33-217	ENST00000531637	NUS1	Q96E22	293 aa		4.15	□□□□□ -1.75
USP33-217	ENST00000531637	RNF2	Q99496	336 aa		4.15	□□□□□ -1.75
USP33-217	ENST00000531637	HIST1H4G	Q99525	98 aa		4.15	□□□□□ -1.75
USP33-217	ENST00000531637	ZNF184	Q99676	751 aa	Predicted RBP	4.15	□□□□□ -1.75
USP33-217	ENST00000531637	CHRDL1	Q9BU40	450 aa		4.15	□□□□□ -1.75
USP33-217	ENST00000531637	SELENOI	Q9C0D9	397 aa		4.15	□□□□□ -1.75
USP33-217	ENST00000531637	METTL7A	Q9H8H3	244 aa		4.15	□□□□□ -1.75
USP33-217	ENST00000531637	BTNL2	Q9UIR0	455 aa		4.15	□□□□□ -1.75
USP33-217	ENST00000531637	IKZF2	Q9UKS7	526 aa		4.15	□□□□□ -1.75
USP33-217	ENST00000531637	UBQLN1	Q9UMX0	589 aa	Known RBP	4.15	□□□□□ -1.75
USP33-217	ENST00000531637	HAS3	O00219	553 aa		4.14	□□□□□ -1.75
USP33-217	ENST00000531637	MCF2	P10911	925 aa		4.14	□□□□□ -1.75
USP33-217	ENST00000531637	PTGDS	P41222	190 aa		4.14	□□□□□ -1.75
USP33-217	ENST00000531637	OR3A4P	P47883	348 aa		4.14	□□□□□ -1.75
USP33-217	ENST00000531637	TLE4	Q04727	773 aa		4.14	□□□□□ -1.75
USP33-217	ENST00000531637	MRPL28	Q13084	256 aa	Known RBP	4.14	□□□□□ -1.75
USP33-217	ENST00000531637	MICB	Q29980	383 aa		4.14	□□□□□ -1.75
USP33-217	ENST00000531637	ISX	Q2M1V0	245 aa		4.14	□□□□□ -1.75
USP33-217	ENST00000531637	OR52E8	Q6IFG1	317 aa		4.14	□□□□□ -1.75
USP33-217	ENST00000531637	C11orf71	Q6IPW1	123 aa		4.14	□□□□□ -1.75
USP33-217	ENST00000531637	ZYG11A	Q6WRX3	759 aa		4.14	□□□□□ -1.75
USP33-217	ENST00000531637	PGAP1	Q75T13	922 aa		4.14	□□□□□ -1.75
USP33-217	ENST00000531637	DHDDS	Q86SQ9	333 aa		4.14	□□□□□ -1.75
USP33-217	ENST00000531637	ZNF589	Q86UQ0	364 aa	Predicted RBP	4.14	□□□□□ -1.75
USP33-217	ENST00000531637	TRIM69	Q86WT6	500 aa		4.14	□□□□□ -1.75
USP33-217	ENST00000531637	VRK2	Q86Y07	508 aa		4.14	□□□□□ -1.75
USP33-217	ENST00000531637	NUDCD3	Q8IVD9	361 aa		4.14	□□□□□ -1.75
USP33-217	ENST00000531637	SLC22A9	Q8IVM8	553 aa		4.14	□□□□□ -1.75
USP33-217	ENST00000531637	FTMT	Q8N4E7	242 aa		4.14	□□□□□ -1.75
USP33-217	ENST00000531637	CATSPER1	Q8NEC5	780 aa		4.14	□□□□□ -1.75
USP33-217	ENST00000531637	UFD1	Q92890	307 aa		4.14	□□□□□ -1.75
USP33-217	ENST00000531637	RASD2	Q96D21	266 aa		4.14	□□□□□ -1.75
USP33-217	ENST00000531637	B3GALT6	Q96L58	329 aa		4.14	□□□□□ -1.75
USP33-217	ENST00000531637	ZNF641	Q96N77	438 aa	Predicted RBP	4.14	□□□□□ -1.75
USP33-217	ENST00000531637	MAPKAP1	Q9BPZ7	522 aa		4.14	□□□□□ -1.75
USP33-217	ENST00000531637	NICN1	Q9BSH3	213 aa		4.14	□□□□□ -1.75
USP33-217	ENST00000531637	TRIM62	Q9BVG3	475 aa		4.14	□□□□□ -1.75
USP33-217	ENST00000531637	NIPAL2	Q9H841	368 aa		4.14	□□□□□ -1.75
USP33-217	ENST00000531637	FOLH1B	Q9HBA9	442 aa		4.14	□□□□□ -1.75
USP33-217	ENST00000531637	SLC2A8	Q9NY64	477 aa		4.14	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms