RNA–Protein interactions for RNA: ENST00000530906.1

PCF11-205, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-205ENST00000530906 EXOSC4Q9NPD3 245 aaKnown RBP5.11□□□□□ -1.59
PCF11-205ENST00000530906 TRIM36Q9NQ86 728 aa5.11□□□□□ -1.59
PCF11-205ENST00000530906 CTPS2Q9NRF8 586 aa5.11□□□□□ -1.59
PCF11-205ENST00000530906 CUTCQ9NTM9 273 aa5.11□□□□□ -1.59
PCF11-205ENST00000530906 ERVK13-1Q9NX77 482 aa5.11□□□□□ -1.59
PCF11-205ENST00000530906 HCN3Q9P1Z3 774 aa5.11□□□□□ -1.59
PCF11-205ENST00000530906 TNFRSF10DQ9UBN6 386 aa5.11□□□□□ -1.59
PCF11-205ENST00000530906 SUSD2Q9UGT4 822 aa5.11□□□□□ -1.59
PCF11-205ENST00000530906 DAPK2Q9UIK4 370 aa5.11□□□□□ -1.59
PCF11-205ENST00000530906 KCNE5Q9UJ90 142 aa5.11□□□□□ -1.59
PCF11-205ENST00000530906 SERTAD3Q9UJW9 196 aa5.11□□□□□ -1.59
PCF11-205ENST00000530906 CBLCQ9ULV8 474 aa5.11□□□□□ -1.59
PCF11-205ENST00000530906 CA14Q9ULX7 337 aa5.11□□□□□ -1.59
PCF11-205ENST00000530906 ICAM5Q9UMF0 924 aa5.11□□□□□ -1.59
PCF11-205ENST00000530906 SIGLEC7Q9Y286 467 aa5.11□□□□□ -1.59
PCF11-205ENST00000530906 OR10H1Q9Y4A9 318 aa5.11□□□□□ -1.59
PCF11-205ENST00000530906 NUP210LQ5VU65 1888 aa5.11□□□□□ -1.59
PCF11-205ENST00000530906 A0A087WUJ7 227 aa5.1□□□□□ -1.59
PCF11-205ENST00000530906 IGHV1OR21-1A0A087WYE8 117 aa5.1□□□□□ -1.59
PCF11-205ENST00000530906 A0A1B0GX78 115 aa5.1□□□□□ -1.59
PCF11-205ENST00000530906 GXYLT2A0PJZ3 443 aa5.1□□□□□ -1.59
PCF11-205ENST00000530906 FUOMA2VDF0 154 aa5.1□□□□□ -1.59
PCF11-205ENST00000530906 ANKRD61A6NGH8 418 aa5.1□□□□□ -1.59
PCF11-205ENST00000530906 CCDC85CA6NKD9 419 aa5.1□□□□□ -1.59
PCF11-205ENST00000530906 J3QRE1 110 aa5.1□□□□□ -1.59
PCF11-205ENST00000530906 ETV2O00321 342 aaPredicted RBP5.1□□□□□ -1.59
PCF11-205ENST00000530906 SCDO00767 359 aa5.1□□□□□ -1.59
PCF11-205ENST00000530906 CDC42EP2O14613 210 aa5.1□□□□□ -1.59
PCF11-205ENST00000530906 PRRG2O14669 202 aa5.1□□□□□ -1.59
PCF11-205ENST00000530906 IMPA2O14732 288 aa5.1□□□□□ -1.59
PCF11-205ENST00000530906 TO15178 435 aa5.1□□□□□ -1.59
PCF11-205ENST00000530906 DNAJB6O75190 326 aa5.1□□□□□ -1.59
PCF11-205ENST00000530906 IL33O95760 270 aa5.1□□□□□ -1.59
PCF11-205ENST00000530906 CSTAP01040 98 aa5.1□□□□□ -1.59
PCF11-205ENST00000530906 APOA1P02647 267 aa5.1□□□□□ -1.59
PCF11-205ENST00000530906 MT-ND5P03915 603 aa5.1□□□□□ -1.59
PCF11-205ENST00000530906 IFNA16P05015 189 aa5.1□□□□□ -1.59
PCF11-205ENST00000530906 ANKRD34CP0C6C1 535 aa5.1□□□□□ -1.59
PCF11-205ENST00000530906 CT45A8P0DMV1 189 aa5.1□□□□□ -1.59
PCF11-205ENST00000530906 CT45A9P0DMV2 189 aa5.1□□□□□ -1.59
PCF11-205ENST00000530906 CKMT1AP12532 417 aa5.1□□□□□ -1.59
PCF11-205ENST00000530906 HPGDP15428 266 aa5.1□□□□□ -1.59
PCF11-205ENST00000530906 TGM1P22735 817 aa5.1□□□□□ -1.59
PCF11-205ENST00000530906 PTGER1P34995 402 aa5.1□□□□□ -1.59
PCF11-205ENST00000530906 SOX3P41225 446 aa5.1□□□□□ -1.59
PCF11-205ENST00000530906 CXCL12P48061 93 aa5.1□□□□□ -1.59
PCF11-205ENST00000530906 PPP1CAP62136 330 aa5.1□□□□□ -1.59
PCF11-205ENST00000530906 ACTA2P62736 377 aa5.1□□□□□ -1.59
PCF11-205ENST00000530906 PPP3R1P63098 170 aa5.1□□□□□ -1.59
PCF11-205ENST00000530906 ACTG2P63267 376 aa5.1□□□□□ -1.59
PCF11-205ENST00000530906 MRPL28Q13084 256 aaKnown RBP5.1□□□□□ -1.59
PCF11-205ENST00000530906 GALEQ14376 348 aa5.1□□□□□ -1.59
PCF11-205ENST00000530906 GGTLC2Q14390 218 aa5.1□□□□□ -1.59
PCF11-205ENST00000530906 ZNF267Q14586 743 aaPredicted RBP5.1□□□□□ -1.59
PCF11-205ENST00000530906 DEFB110Q30KQ9 67 aa5.1□□□□□ -1.59
PCF11-205ENST00000530906 KLHL26Q53HC5 615 aa5.1□□□□□ -1.59
PCF11-205ENST00000530906 CT45A2Q5DJT8 189 aa5.1□□□□□ -1.59
PCF11-205ENST00000530906 EMC4Q5J8M3 183 aa5.1□□□□□ -1.59
PCF11-205ENST00000530906 SLC35D3Q5M8T2 416 aa5.1□□□□□ -1.59
PCF11-205ENST00000530906 DDI2Q5TDH0 399 aa5.1□□□□□ -1.59
PCF11-205ENST00000530906 AGAP7PQ5VUJ5 663 aa5.1□□□□□ -1.59
PCF11-205ENST00000530906 LIPKQ5VXJ0 399 aa5.1□□□□□ -1.59
PCF11-205ENST00000530906 WBP2NLQ6ICG8 309 aa5.1□□□□□ -1.59
PCF11-205ENST00000530906 MZT2AQ6P582 158 aa5.1□□□□□ -1.59
PCF11-205ENST00000530906 ZNF322Q6U7Q0 402 aaPredicted RBP5.1□□□□□ -1.59
PCF11-205ENST00000530906 DPY19L2P2Q6ZN68 376 aa5.1□□□□□ -1.59
PCF11-205ENST00000530906 OLIG3Q7RTU3 272 aa5.1□□□□□ -1.59
PCF11-205ENST00000530906 TMPRSS7Q7RTY8 843 aa5.1□□□□□ -1.59
PCF11-205ENST00000530906 WDR53Q7Z5U6 358 aaPredicted RBP5.1□□□□□ -1.59
PCF11-205ENST00000530906 OAFQ86UD1 273 aa5.1□□□□□ -1.59
PCF11-205ENST00000530906 CDH24Q86UP0 819 aa5.1□□□□□ -1.59
PCF11-205ENST00000530906 TPRA1Q86W33 373 aa5.1□□□□□ -1.59
PCF11-205ENST00000530906 CPOQ8IVL8 374 aa5.1□□□□□ -1.59
PCF11-205ENST00000530906 SYS1Q8N2H4 156 aa5.1□□□□□ -1.59
PCF11-205ENST00000530906 MS4A15Q8N5U1 240 aa5.1□□□□□ -1.59
PCF11-205ENST00000530906 BCORP1Q8N888 145 aa5.1□□□□□ -1.59
PCF11-205ENST00000530906 RCBTB1Q8NDN9 531 aa5.1□□□□□ -1.59
PCF11-205ENST00000530906 CEP192Q8TEP8 1941 aa5.1□□□□□ -1.59
PCF11-205ENST00000530906 RLN3Q8WXF3 142 aa5.1□□□□□ -1.59
PCF11-205ENST00000530906 PHYHIPQ92561 330 aa5.1□□□□□ -1.59
PCF11-205ENST00000530906 CNOT9Q92600 299 aaKnown RBP5.1□□□□□ -1.59
PCF11-205ENST00000530906 SGTBQ96EQ0 304 aa5.1□□□□□ -1.59
PCF11-205ENST00000530906 SAMD8Q96LT4 415 aa5.1□□□□□ -1.59
PCF11-205ENST00000530906 TGM7Q96PF1 710 aa5.1□□□□□ -1.59
PCF11-205ENST00000530906 MNTQ99583 582 aa5.1□□□□□ -1.59
PCF11-205ENST00000530906 IFT27Q9BW83 186 aa5.1□□□□□ -1.59
PCF11-205ENST00000530906 DPH1Q9BZG8 443 aa5.1□□□□□ -1.59
PCF11-205ENST00000530906 TGIF2Q9GZN2 237 aa5.1□□□□□ -1.59
PCF11-205ENST00000530906 SMURF1Q9HCE7 757 aa5.1□□□□□ -1.59
PCF11-205ENST00000530906 HINT3Q9NQE9 182 aaKnown RBP5.1□□□□□ -1.59
PCF11-205ENST00000530906 LANCL2Q9NS86 450 aa5.1□□□□□ -1.59
PCF11-205ENST00000530906 TMEM74BQ9NUR3 256 aa5.1□□□□□ -1.59
PCF11-205ENST00000530906 IRAK4Q9NWZ3 460 aa5.1□□□□□ -1.59
PCF11-205ENST00000530906 TXNL4BQ9NX01 149 aaKnown RBP5.1□□□□□ -1.59
PCF11-205ENST00000530906 TAS2R16Q9NYV7 291 aa5.1□□□□□ -1.59
PCF11-205ENST00000530906 LRIT1Q9P2V4 623 aa5.1□□□□□ -1.59
PCF11-205ENST00000530906 RABL2AQ9UBK7 228 aaPredicted RBP5.1□□□□□ -1.59
PCF11-205ENST00000530906 CLEC2DQ9UHP7 191 aa5.1□□□□□ -1.59
PCF11-205ENST00000530906 ADAM30Q9UKF2 790 aa5.1□□□□□ -1.59
PCF11-205ENST00000530906 RABL2BQ9UNT1 228 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms