RNA–Protein interactions for RNA: ENST00000528280.1

CHD7-208, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-208ENST00000528280 BMP2P12643 396 aa8.53□□□□□ -1.04
CHD7-208ENST00000528280 ETFAP13804 333 aa8.53□□□□□ -1.04
CHD7-208ENST00000528280 ETS2P15036 469 aa8.53□□□□□ -1.04
CHD7-208ENST00000528280 MVDP53602 400 aa8.53□□□□□ -1.04
CHD7-208ENST00000528280 OR2B6P58173 313 aa8.53□□□□□ -1.04
CHD7-208ENST00000528280 EPS8Q12929 822 aa8.53□□□□□ -1.04
CHD7-208ENST00000528280 SQLEQ14534 574 aa8.53□□□□□ -1.04
CHD7-208ENST00000528280 POU4F3Q15319 338 aa8.53□□□□□ -1.04
CHD7-208ENST00000528280 MRPL2Q5T653 305 aaKnown RBP8.53□□□□□ -1.04
CHD7-208ENST00000528280 RNF220Q5VTB9 566 aa8.53□□□□□ -1.04
CHD7-208ENST00000528280 OLIG3Q7RTU3 272 aa8.53□□□□□ -1.04
CHD7-208ENST00000528280 NUFIP2Q7Z417 695 aaKnown RBP8.53□□□□□ -1.04
CHD7-208ENST00000528280 CXorf67Q86X51 503 aaPredicted RBP8.53□□□□□ -1.04
CHD7-208ENST00000528280 KRT73Q86Y46 540 aa8.53□□□□□ -1.04
CHD7-208ENST00000528280 LRRC75A-AS1Q8N1F1 130 aa8.53□□□□□ -1.04
CHD7-208ENST00000528280 BBS10Q8TAM1 723 aa8.53□□□□□ -1.04
CHD7-208ENST00000528280 TSPEARQ8WU66 669 aa8.53□□□□□ -1.04
CHD7-208ENST00000528280 CKAP2Q8WWK9 683 aa8.53□□□□□ -1.04
CHD7-208ENST00000528280 VPS33AQ96AX1 596 aa8.53□□□□□ -1.04
CHD7-208ENST00000528280 ZNF524Q96C55 264 aa8.53□□□□□ -1.04
CHD7-208ENST00000528280 SPDL1Q96EA4 605 aa8.53□□□□□ -1.04
CHD7-208ENST00000528280 MARK4Q96L34 752 aa8.53□□□□□ -1.04
CHD7-208ENST00000528280 SPATA9Q9BWV2 254 aa8.53□□□□□ -1.04
CHD7-208ENST00000528280 PAIP1Q9H074 479 aaKnown RBP8.53□□□□□ -1.04
CHD7-208ENST00000528280 ESRP2Q9H6T0 727 aaKnown RBP8.53□□□□□ -1.04
CHD7-208ENST00000528280 A4GALTQ9NPC4 353 aa8.53□□□□□ -1.04
CHD7-208ENST00000528280 SLCO1B3Q9NPD5 702 aa8.53□□□□□ -1.04
CHD7-208ENST00000528280 CCDC167Q9P0B6 97 aa8.53□□□□□ -1.04
CHD7-208ENST00000528280 OSGIN1Q9UJX0 560 aa8.53□□□□□ -1.04
CHD7-208ENST00000528280 NOSIPQ9Y314 301 aaKnown RBP8.53□□□□□ -1.04
CHD7-208ENST00000528280 CSPG4Q6UVK1 2322 aa8.53□□□□□ -1.04
CHD7-208ENST00000528280 DSPPQ9NZW4 1301 aa8.53□□□□□ -1.04
CHD7-208ENST00000528280 HEATR5AQ86XA9 2040 aa8.53□□□□□ -1.04
CHD7-208ENST00000528280 NBEAL1Q6ZS30 2694 aa8.52□□□□□ -1.05
CHD7-208ENST00000528280 NSD1Q96L73 2696 aaPredicted RBP8.52□□□□□ -1.05
CHD7-208ENST00000528280 A0A1W2PP18 115 aa8.52□□□□□ -1.05
CHD7-208ENST00000528280 CLDN24A6NM45 220 aa8.52□□□□□ -1.05
CHD7-208ENST00000528280 A8MVM7 634 aa8.52□□□□□ -1.05
CHD7-208ENST00000528280 SMPD2O60906 423 aa8.52□□□□□ -1.05
CHD7-208ENST00000528280 MRPL33O75394 65 aaKnown RBP8.52□□□□□ -1.05
CHD7-208ENST00000528280 GCM2O75603 506 aaPredicted RBP8.52□□□□□ -1.05
CHD7-208ENST00000528280 SERPINB7O75635 380 aa8.52□□□□□ -1.05
CHD7-208ENST00000528280 VAMP5O95183 116 aa8.52□□□□□ -1.05
CHD7-208ENST00000528280 BCHEP06276 602 aa8.52□□□□□ -1.05
CHD7-208ENST00000528280 CD53P19397 219 aa8.52□□□□□ -1.05
CHD7-208ENST00000528280 NCF2P19878 526 aaPredicted RBP8.52□□□□□ -1.05
CHD7-208ENST00000528280 PAX7P23759 505 aa8.52□□□□□ -1.05
CHD7-208ENST00000528280 TACR3P29371 465 aa8.52□□□□□ -1.05
CHD7-208ENST00000528280 SLC16A1P53985 500 aa8.52□□□□□ -1.05
CHD7-208ENST00000528280 H3F3AP84243 136 aa8.52□□□□□ -1.05
CHD7-208ENST00000528280 ZSCAN26Q16670 478 aa8.52□□□□□ -1.05
CHD7-208ENST00000528280 AGKQ53H12 422 aa8.52□□□□□ -1.05
CHD7-208ENST00000528280 TTMPQ5BVD1 217 aa8.52□□□□□ -1.05
CHD7-208ENST00000528280 ZNF311Q5JNZ3 666 aa8.52□□□□□ -1.05
CHD7-208ENST00000528280 LRIF1Q5T3J3 769 aa8.52□□□□□ -1.05
CHD7-208ENST00000528280 FBXW9Q5XUX1 488 aa8.52□□□□□ -1.05
CHD7-208ENST00000528280 OR7E24Q6IFN5 339 aa8.52□□□□□ -1.05
CHD7-208ENST00000528280 REEP3Q6NUK4 255 aa8.52□□□□□ -1.05
CHD7-208ENST00000528280 SLC2A7Q6PXP3 512 aa8.52□□□□□ -1.05
CHD7-208ENST00000528280 PRSS57Q6UWY2 283 aa8.52□□□□□ -1.05
CHD7-208ENST00000528280 BHLHA15Q7RTS1 189 aaPredicted RBP8.52□□□□□ -1.05
CHD7-208ENST00000528280 P3H2Q8IVL5 708 aa8.52□□□□□ -1.05
CHD7-208ENST00000528280 OR9I1Q8NGQ6 314 aa8.52□□□□□ -1.05
CHD7-208ENST00000528280 SPATA3Q8NHX4 192 aa8.52□□□□□ -1.05
CHD7-208ENST00000528280 APH1AQ96BI3 265 aa8.52□□□□□ -1.05
CHD7-208ENST00000528280 TMEM19Q96HH6 336 aa8.52□□□□□ -1.05
CHD7-208ENST00000528280 RADILQ96JH8 1075 aa8.52□□□□□ -1.05
CHD7-208ENST00000528280 ZNF607Q96SK3 696 aa8.52□□□□□ -1.05
CHD7-208ENST00000528280 SF3B5Q9BWJ5 86 aaKnown RBP8.52□□□□□ -1.05
CHD7-208ENST00000528280 TAPBPLQ9BX59 468 aa8.52□□□□□ -1.05
CHD7-208ENST00000528280 ZNF443Q9Y2A4 671 aaPredicted RBP8.52□□□□□ -1.05
CHD7-208ENST00000528280 COL6A5A8TX70 2615 aa8.51□□□□□ -1.05
CHD7-208ENST00000528280 IGHV3-15A0A0B4J1V0 119 aa8.51□□□□□ -1.05
CHD7-208ENST00000528280 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.51□□□□□ -1.05
CHD7-208ENST00000528280 PRORSD1PA6NEY8 169 aa8.51□□□□□ -1.05
CHD7-208ENST00000528280 OR6C65A6NJZ3 312 aa8.51□□□□□ -1.05
CHD7-208ENST00000528280 ZNF814B7Z6K7 855 aa8.51□□□□□ -1.05
CHD7-208ENST00000528280 AP3D1O14617 1153 aa8.51□□□□□ -1.05
CHD7-208ENST00000528280 PGM3O95394 542 aa8.51□□□□□ -1.05
CHD7-208ENST00000528280 THBDP07204 575 aa8.51□□□□□ -1.05
CHD7-208ENST00000528280 VIMP08670 466 aaKnown RBP8.51□□□□□ -1.05
CHD7-208ENST00000528280 GPX2P18283 190 aa8.51□□□□□ -1.05
CHD7-208ENST00000528280 GGT1P19440 569 aa8.51□□□□□ -1.05
CHD7-208ENST00000528280 KLK2P20151 261 aa8.51□□□□□ -1.05
CHD7-208ENST00000528280 CCNA2P20248 432 aa8.51□□□□□ -1.05
CHD7-208ENST00000528280 SLC6A2P23975 617 aa8.51□□□□□ -1.05
CHD7-208ENST00000528280 HOXC12P31275 282 aa8.51□□□□□ -1.05
CHD7-208ENST00000528280 PRKAR1BP31321 381 aa8.51□□□□□ -1.05
CHD7-208ENST00000528280 CCKARP32238 428 aa8.51□□□□□ -1.05
CHD7-208ENST00000528280 IDUAP35475 653 aa8.51□□□□□ -1.05
CHD7-208ENST00000528280 ACAA2P42765 397 aaKnown RBP8.51□□□□□ -1.05
CHD7-208ENST00000528280 ADAM8P78325 824 aa8.51□□□□□ -1.05
CHD7-208ENST00000528280 NKX6-1P78426 367 aaPredicted RBP8.51□□□□□ -1.05
CHD7-208ENST00000528280 TGFBR3Q03167 851 aa8.51□□□□□ -1.05
CHD7-208ENST00000528280 MAPK11Q15759 364 aa8.51□□□□□ -1.05
CHD7-208ENST00000528280 TIMM23BQ5SRD1 257 aa8.51□□□□□ -1.05
CHD7-208ENST00000528280 TMEM225Q6GV28 225 aa8.51□□□□□ -1.05
CHD7-208ENST00000528280 ABLIM2Q6H8Q1 611 aa8.51□□□□□ -1.05
CHD7-208ENST00000528280 ADAM5Q6NVV9 412 aa8.51□□□□□ -1.05
CHD7-208ENST00000528280 PAQR6Q6TCH4 344 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 130.6 ms