RNA–Protein interactions for RNA: ENST00000527680.1

TRAPPC4-208, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-208ENST00000527680 TRAPPC4Q9Y296 219 aa19.72■□□□□ 0.75
TRAPPC4-208ENST00000527680 B3GALT5Q9Y2C3 310 aa19.72■□□□□ 0.75
TRAPPC4-208ENST00000527680 TMED7Q9Y3B3 224 aa19.72■□□□□ 0.75
TRAPPC4-208ENST00000527680 V9GYY5 206 aaPredicted RBP19.72■□□□□ 0.75
TRAPPC4-208ENST00000527680 PRAMEF27A3QJZ7 478 aa19.71■□□□□ 0.75
TRAPPC4-208ENST00000527680 DNPH1O43598 174 aa19.71■□□□□ 0.75
TRAPPC4-208ENST00000527680 IL7RP16871 459 aa19.71■□□□□ 0.75
TRAPPC4-208ENST00000527680 PTAFRP25105 342 aa19.71■□□□□ 0.75
TRAPPC4-208ENST00000527680 UFM1P61960 85 aa19.71■□□□□ 0.75
TRAPPC4-208ENST00000527680 SLC35A1P78382 337 aa19.71■□□□□ 0.75
TRAPPC4-208ENST00000527680 KRTAP1-1Q07627 177 aa19.71■□□□□ 0.75
TRAPPC4-208ENST00000527680 GNA13Q14344 377 aa19.71■□□□□ 0.75
TRAPPC4-208ENST00000527680 AP1ARQ63HQ0 302 aa19.71■□□□□ 0.75
TRAPPC4-208ENST00000527680 OR7E24Q6IFN5 339 aa19.71■□□□□ 0.75
TRAPPC4-208ENST00000527680 CASP12Q6UXS9 341 aa19.71■□□□□ 0.75
TRAPPC4-208ENST00000527680 DTX2Q86UW9 622 aa19.71■□□□□ 0.75
TRAPPC4-208ENST00000527680 ANKFN1Q8N957 763 aa19.71■□□□□ 0.75
TRAPPC4-208ENST00000527680 PMM1Q92871 262 aa19.71■□□□□ 0.75
TRAPPC4-208ENST00000527680 CCDC115Q96NT0 180 aa19.71■□□□□ 0.75
TRAPPC4-208ENST00000527680 TRNT1Q96Q11 434 aaKnown RBP19.71■□□□□ 0.75
TRAPPC4-208ENST00000527680 OR52E6Q96RD3 313 aa19.71■□□□□ 0.75
TRAPPC4-208ENST00000527680 GRIP2Q9C0E4 1043 aa19.71■□□□□ 0.75
TRAPPC4-208ENST00000527680 MTHFD2LQ9H903 347 aaPredicted RBP19.71■□□□□ 0.75
TRAPPC4-208ENST00000527680 SSU72Q9NP77 194 aaKnown RBP19.71■□□□□ 0.75
TRAPPC4-208ENST00000527680 PARPBPQ9NWS1 579 aa19.71■□□□□ 0.75
TRAPPC4-208ENST00000527680 SONP18583 2426 aaKnown RBP19.7■□□□□ 0.74
TRAPPC4-208ENST00000527680 M0R1B8 84 aa19.7■□□□□ 0.74
TRAPPC4-208ENST00000527680 AP3D1O14617 1153 aa19.7■□□□□ 0.74
TRAPPC4-208ENST00000527680 EIF1BO60739 113 aaKnown RBP19.7■□□□□ 0.74
TRAPPC4-208ENST00000527680 C1QCP02747 245 aa19.7■□□□□ 0.74
TRAPPC4-208ENST00000527680 DHRS4L1P0CG22 281 aa19.7■□□□□ 0.74
TRAPPC4-208ENST00000527680 NR2F1P10589 423 aa19.7■□□□□ 0.74
TRAPPC4-208ENST00000527680 UQCRBP14927 111 aa19.7■□□□□ 0.74
TRAPPC4-208ENST00000527680 NTF4P34130 210 aa19.7■□□□□ 0.74
TRAPPC4-208ENST00000527680 POLR2HP52434 150 aaKnown RBP19.7■□□□□ 0.74
TRAPPC4-208ENST00000527680 NUDT6P53370 316 aa19.7■□□□□ 0.74
TRAPPC4-208ENST00000527680 NRF1Q16656 503 aa19.7■□□□□ 0.74
TRAPPC4-208ENST00000527680 C9orf135Q5VTT2 229 aa19.7■□□□□ 0.74
TRAPPC4-208ENST00000527680 CMIPQ8IY22 773 aa19.7■□□□□ 0.74
TRAPPC4-208ENST00000527680 LRRC34Q8IZ02 419 aa19.7■□□□□ 0.74
TRAPPC4-208ENST00000527680 FBXL14Q8N1E6 418 aa19.7■□□□□ 0.74
TRAPPC4-208ENST00000527680 ZBTB18Q99592 522 aa19.7■□□□□ 0.74
TRAPPC4-208ENST00000527680 CACNG6Q9BXT2 260 aa19.7■□□□□ 0.74
TRAPPC4-208ENST00000527680 MEAF6Q9HAF1 191 aa19.7■□□□□ 0.74
TRAPPC4-208ENST00000527680 SLC25A15Q9Y619 301 aa19.7■□□□□ 0.74
TRAPPC4-208ENST00000527680 CR1P17927 2039 aa19.69■□□□□ 0.74
TRAPPC4-208ENST00000527680 E7EQL1 145 aa19.69■□□□□ 0.74
TRAPPC4-208ENST00000527680 GSNP06396 782 aa19.69■□□□□ 0.74
TRAPPC4-208ENST00000527680 CD40P25942 277 aa19.69■□□□□ 0.74
TRAPPC4-208ENST00000527680 TACR3P29371 465 aa19.69■□□□□ 0.74
TRAPPC4-208ENST00000527680 TTKP33981 857 aa19.69■□□□□ 0.74
TRAPPC4-208ENST00000527680 FABP6P51161 128 aa19.69■□□□□ 0.74
TRAPPC4-208ENST00000527680 SLC16A1P53985 500 aa19.69■□□□□ 0.74
TRAPPC4-208ENST00000527680 RAB35Q15286 201 aa19.69■□□□□ 0.74
TRAPPC4-208ENST00000527680 GABRA6Q16445 453 aa19.69■□□□□ 0.74
TRAPPC4-208ENST00000527680 HHATQ5VTY9 493 aa19.69■□□□□ 0.74
TRAPPC4-208ENST00000527680 MREGQ8N565 214 aa19.69■□□□□ 0.74
TRAPPC4-208ENST00000527680 OR52E4Q8NGH9 312 aa19.69■□□□□ 0.74
TRAPPC4-208ENST00000527680 WDR60Q8WVS4 1066 aa19.69■□□□□ 0.74
TRAPPC4-208ENST00000527680 TEX37Q96LM6 180 aa19.69■□□□□ 0.74
TRAPPC4-208ENST00000527680 MUS81Q96NY9 551 aa19.69■□□□□ 0.74
TRAPPC4-208ENST00000527680 DHRS9Q9BPW9 319 aa19.69■□□□□ 0.74
TRAPPC4-208ENST00000527680 INPP5KQ9BT40 448 aa19.69■□□□□ 0.74
TRAPPC4-208ENST00000527680 OSGIN1Q9UJX0 560 aa19.69■□□□□ 0.74
TRAPPC4-208ENST00000527680 TMEM72A0PK05 275 aa19.68■□□□□ 0.74
TRAPPC4-208ENST00000527680 AGAP5A6NIR3 686 aa19.68■□□□□ 0.74
TRAPPC4-208ENST00000527680 FOXG1P55316 489 aaPredicted RBP19.68■□□□□ 0.74
TRAPPC4-208ENST00000527680 CEP85LQ5SZL2 805 aa19.68■□□□□ 0.74
TRAPPC4-208ENST00000527680 LRRC74BQ6ZQY2 392 aa19.68■□□□□ 0.74
TRAPPC4-208ENST00000527680 SPATA19Q7Z5L4 167 aa19.68■□□□□ 0.74
TRAPPC4-208ENST00000527680 MUC15Q8N387 334 aa19.68■□□□□ 0.74
TRAPPC4-208ENST00000527680 PNPT1Q8TCS8 783 aaKnown RBP19.68■□□□□ 0.74
TRAPPC4-208ENST00000527680 SLC38A1Q9H2H9 487 aa19.68■□□□□ 0.74
TRAPPC4-208ENST00000527680 CBLN4Q9NTU7 201 aa19.68■□□□□ 0.74
TRAPPC4-208ENST00000527680 SLC9A8Q9Y2E8 581 aa19.68■□□□□ 0.74
TRAPPC4-208ENST00000527680 ATP23Q9Y6H3 246 aa19.68■□□□□ 0.74
TRAPPC4-208ENST00000527680 CFAP73A6NFT4 308 aa19.67■□□□□ 0.74
TRAPPC4-208ENST00000527680 ZNF208O43345 1280 aa19.67■□□□□ 0.74
TRAPPC4-208ENST00000527680 TLX2O43763 284 aaPredicted RBP19.67■□□□□ 0.74
TRAPPC4-208ENST00000527680 PGRP06401 933 aa19.67■□□□□ 0.74
TRAPPC4-208ENST00000527680 DBIP07108 87 aaKnown RBP19.67■□□□□ 0.74
TRAPPC4-208ENST00000527680 CHRM4P08173 479 aa19.67■□□□□ 0.74
TRAPPC4-208ENST00000527680 CXCR1P25024 350 aa19.67■□□□□ 0.74
TRAPPC4-208ENST00000527680 SLC1A3P43003 542 aa19.67■□□□□ 0.74
TRAPPC4-208ENST00000527680 TXNL4AP83876 142 aaKnown RBP19.67■□□□□ 0.74
TRAPPC4-208ENST00000527680 H3F3AP84243 136 aa19.67■□□□□ 0.74
TRAPPC4-208ENST00000527680 TGFBR3Q03167 851 aa19.67■□□□□ 0.74
TRAPPC4-208ENST00000527680 SPOCK1Q08629 439 aa19.67■□□□□ 0.74
TRAPPC4-208ENST00000527680 BST1Q10588 318 aa19.67■□□□□ 0.74
TRAPPC4-208ENST00000527680 MPP2Q14168 576 aa19.67■□□□□ 0.74
TRAPPC4-208ENST00000527680 OGFOD2Q6N063 350 aa19.67■□□□□ 0.74
TRAPPC4-208ENST00000527680 PEX5LQ8IYB4 626 aa19.67■□□□□ 0.74
TRAPPC4-208ENST00000527680 PARD6BQ9BYG5 372 aa19.67■□□□□ 0.74
TRAPPC4-208ENST00000527680 AIG1Q9NVV5 245 aa19.67■□□□□ 0.74
TRAPPC4-208ENST00000527680 MALT1Q9UDY8 824 aa19.67■□□□□ 0.74
TRAPPC4-208ENST00000527680 HAO1Q9UJM8 370 aa19.67■□□□□ 0.74
TRAPPC4-208ENST00000527680 GOLGA8QA0A0J9YX86 632 aa19.66■□□□□ 0.74
TRAPPC4-208ENST00000527680 FAM234BA2RU67 622 aa19.66■□□□□ 0.74
TRAPPC4-208ENST00000527680 GOLGA8OA6NCC3 632 aa19.66■□□□□ 0.74
TRAPPC4-208ENST00000527680 GOLGA8NF8WBI6 632 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms