RNA–Protein interactions for RNA: ENST00000527046.5

NEDD8-205, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-205ENST00000527046 OR2V1Q8NHB1 315 aa9.65□□□□□ -0.86
NEDD8-205ENST00000527046 PRR7Q8TB68 274 aa9.65□□□□□ -0.86
NEDD8-205ENST00000527046 CANT1Q8WVQ1 401 aa9.65□□□□□ -0.86
NEDD8-205ENST00000527046 GEMIN6Q8WXD5 167 aaKnown RBP9.65□□□□□ -0.86
NEDD8-205ENST00000527046 LZICQ8WZA0 190 aa9.65□□□□□ -0.86
NEDD8-205ENST00000527046 SMPDL3BQ92485 455 aa9.65□□□□□ -0.86
NEDD8-205ENST00000527046 TAAR8Q969N4 342 aa9.65□□□□□ -0.86
NEDD8-205ENST00000527046 SLC47A1Q96FL8 570 aa9.65□□□□□ -0.86
NEDD8-205ENST00000527046 SLC41A3Q96GZ6 507 aa9.65□□□□□ -0.86
NEDD8-205ENST00000527046 SEPHS2Q99611 448 aa9.65□□□□□ -0.86
NEDD8-205ENST00000527046 TTYH2Q9BSA4 534 aa9.65□□□□□ -0.86
NEDD8-205ENST00000527046 CACYBPQ9HB71 228 aaKnown RBP9.65□□□□□ -0.86
NEDD8-205ENST00000527046 ERRFI1Q9UJM3 462 aaPredicted RBP9.65□□□□□ -0.86
NEDD8-205ENST00000527046 SLC7A7Q9UM01 511 aa9.65□□□□□ -0.86
NEDD8-205ENST00000527046 CAMK2AQ9UQM7 478 aa9.65□□□□□ -0.86
NEDD8-205ENST00000527046 MEMO1Q9Y316 297 aa9.65□□□□□ -0.86
NEDD8-205ENST00000527046 DOCK7Q96N67 2140 aa9.65□□□□□ -0.86
NEDD8-205ENST00000527046 RELNP78509 3460 aa9.64□□□□□ -0.87
NEDD8-205ENST00000527046 TRGV8A0A0C4DH27 118 aa9.64□□□□□ -0.87
NEDD8-205ENST00000527046 CD8B2A6NJW9 211 aa9.64□□□□□ -0.87
NEDD8-205ENST00000527046 A8MVM7 634 aa9.64□□□□□ -0.87
NEDD8-205ENST00000527046 FAM47E-STBD1D6RA91 191 aa9.64□□□□□ -0.87
NEDD8-205ENST00000527046 LRRN3E7EW58 273 aa9.64□□□□□ -0.87
NEDD8-205ENST00000527046 E9PLN8 166 aa9.64□□□□□ -0.87
NEDD8-205ENST00000527046 EIF1AYO14602 144 aaKnown RBP9.64□□□□□ -0.87
NEDD8-205ENST00000527046 PRRG2O14669 202 aa9.64□□□□□ -0.87
NEDD8-205ENST00000527046 SEC14L5O43304 696 aa9.64□□□□□ -0.87
NEDD8-205ENST00000527046 WDR1O75083 606 aa9.64□□□□□ -0.87
NEDD8-205ENST00000527046 BGLAPP02818 100 aa9.64□□□□□ -0.87
NEDD8-205ENST00000527046 MT-ND1P03886 318 aa9.64□□□□□ -0.87
NEDD8-205ENST00000527046 IFNW1P05000 195 aa9.64□□□□□ -0.87
NEDD8-205ENST00000527046 PTNP21246 168 aa9.64□□□□□ -0.87
NEDD8-205ENST00000527046 ENPP1P22413 925 aa9.64□□□□□ -0.87
NEDD8-205ENST00000527046 CXCR1P25024 350 aa9.64□□□□□ -0.87
NEDD8-205ENST00000527046 NTF4P34130 210 aa9.64□□□□□ -0.87
NEDD8-205ENST00000527046 CLK1P49759 484 aaKnown RBP9.64□□□□□ -0.87
NEDD8-205ENST00000527046 DIO1P49895 249 aa9.64□□□□□ -0.87
NEDD8-205ENST00000527046 ERFP50548 548 aa9.64□□□□□ -0.87
NEDD8-205ENST00000527046 MAP2K6P52564 334 aa9.64□□□□□ -0.87
NEDD8-205ENST00000527046 HMGA2P52926 109 aa9.64□□□□□ -0.87
NEDD8-205ENST00000527046 UGT2B15P54855 530 aa9.64□□□□□ -0.87
NEDD8-205ENST00000527046 COPZ1P61923 177 aa9.64□□□□□ -0.87
NEDD8-205ENST00000527046 ADORA2A-AS1P86434 159 aa9.64□□□□□ -0.87
NEDD8-205ENST00000527046 MYBPHQ13203 477 aa9.64□□□□□ -0.87
NEDD8-205ENST00000527046 FHL1Q13642 323 aa9.64□□□□□ -0.87
NEDD8-205ENST00000527046 GUSBP1Q15486 140 aa9.64□□□□□ -0.87
NEDD8-205ENST00000527046 ZSCAN26Q16670 478 aa9.64□□□□□ -0.87
NEDD8-205ENST00000527046 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.64□□□□□ -0.871e-17■■□□□ 12.3
NEDD8-205ENST00000527046 MTX3Q5HYI7 312 aa9.64□□□□□ -0.87
NEDD8-205ENST00000527046 SWT1Q5T5J6 900 aaKnown RBP9.64□□□□□ -0.87
NEDD8-205ENST00000527046 C1orf185Q5T7R7 199 aa9.64□□□□□ -0.87
NEDD8-205ENST00000527046 NSUN5P2Q63ZY6 315 aa9.64□□□□□ -0.87
NEDD8-205ENST00000527046 C3orf33Q6P1S2 294 aa9.64□□□□□ -0.87
NEDD8-205ENST00000527046 TBPL2Q6SJ96 375 aa9.64□□□□□ -0.87
NEDD8-205ENST00000527046 RPTNQ6XPR3 784 aa9.64□□□□□ -0.87
NEDD8-205ENST00000527046 C9orf106Q8NAJ2 232 aa9.64□□□□□ -0.87
NEDD8-205ENST00000527046 STK35Q8TDR2 534 aa9.64□□□□□ -0.87
NEDD8-205ENST00000527046 TMEM255BQ8WV15 326 aa9.64□□□□□ -0.87
NEDD8-205ENST00000527046 ROBO4Q8WZ75 1007 aa9.64□□□□□ -0.87
NEDD8-205ENST00000527046 DTNBP1Q96EV8 351 aa9.64□□□□□ -0.87
NEDD8-205ENST00000527046 DUS3LQ96G46 650 aaKnown RBP9.64□□□□□ -0.87
NEDD8-205ENST00000527046 PRRC1Q96M27 445 aa9.64□□□□□ -0.87
NEDD8-205ENST00000527046 VKORC1Q9BQB6 163 aa9.64□□□□□ -0.87
NEDD8-205ENST00000527046 TP63Q9H3D4 680 aaPredicted RBP9.64□□□□□ -0.87
NEDD8-205ENST00000527046 CALHM2Q9HA72 323 aa9.64□□□□□ -0.87
NEDD8-205ENST00000527046 NMNAT1Q9HAN9 279 aaPredicted RBP9.64□□□□□ -0.87
NEDD8-205ENST00000527046 C20orf141Q9NUB4 165 aa9.64□□□□□ -0.87
NEDD8-205ENST00000527046 CCM2LQ9NUG4 571 aaPredicted RBP9.64□□□□□ -0.87
NEDD8-205ENST00000527046 ALKBH4Q9NXW9 302 aa9.64□□□□□ -0.87
NEDD8-205ENST00000527046 VNN3Q9NY84 501 aa9.64□□□□□ -0.87
NEDD8-205ENST00000527046 SLC13A4Q9UKG4 626 aa9.64□□□□□ -0.87
NEDD8-205ENST00000527046 TRAPPC4Q9Y296 219 aa9.64□□□□□ -0.87
NEDD8-205ENST00000527046 A0A087WUU8 490 aa9.63□□□□□ -0.87
NEDD8-205ENST00000527046 MBD3L4A6NDZ8 208 aaPredicted RBP9.63□□□□□ -0.87
NEDD8-205ENST00000527046 MBD3L3A6NE82 208 aaPredicted RBP9.63□□□□□ -0.87
NEDD8-205ENST00000527046 MBD3L5A6NJ08 208 aaPredicted RBP9.63□□□□□ -0.87
NEDD8-205ENST00000527046 LIPT2A6NK58 231 aa9.63□□□□□ -0.87
NEDD8-205ENST00000527046 ANKRD65E5RJM6 399 aa9.63□□□□□ -0.87
NEDD8-205ENST00000527046 SMAD9O15198 467 aaKnown RBP9.63□□□□□ -0.87
NEDD8-205ENST00000527046 LRRTM2O43300 516 aa9.63□□□□□ -0.87
NEDD8-205ENST00000527046 PMS2P2O95744 297 aa9.63□□□□□ -0.87
NEDD8-205ENST00000527046 HOXD4P09016 255 aaPredicted RBP9.63□□□□□ -0.87
NEDD8-205ENST00000527046 THRBP10828 461 aa9.63□□□□□ -0.87
NEDD8-205ENST00000527046 PNMTP11086 282 aa9.63□□□□□ -0.87
NEDD8-205ENST00000527046 GABRA1P14867 456 aa9.63□□□□□ -0.87
NEDD8-205ENST00000527046 UQCRBP14927 111 aa9.63□□□□□ -0.87
NEDD8-205ENST00000527046 RHCEP18577 417 aa9.63□□□□□ -0.87
NEDD8-205ENST00000527046 CARD18P57730 90 aa9.63□□□□□ -0.87
NEDD8-205ENST00000527046 NUP107P57740 925 aa9.63□□□□□ -0.87
NEDD8-205ENST00000527046 RAC3P60763 192 aa9.63□□□□□ -0.87
NEDD8-205ENST00000527046 FOXF2Q12947 444 aa9.63□□□□□ -0.87
NEDD8-205ENST00000527046 FLOT2Q14254 428 aa9.63□□□□□ -0.87
NEDD8-205ENST00000527046 SEC23BQ15437 767 aa9.63□□□□□ -0.87
NEDD8-205ENST00000527046 ZNF239Q16600 458 aaKnown RBP9.63□□□□□ -0.87
NEDD8-205ENST00000527046 C4orf17Q53FE4 359 aa9.63□□□□□ -0.87
NEDD8-205ENST00000527046 C1orf140Q5VVS0 124 aa9.63□□□□□ -0.87
NEDD8-205ENST00000527046 HBMQ6B0K9 141 aa9.63□□□□□ -0.87
NEDD8-205ENST00000527046 LIX1LQ8IVB5 337 aa9.63□□□□□ -0.87
NEDD8-205ENST00000527046 PM20D2Q8IYS1 436 aa9.63□□□□□ -0.87
NEDD8-205ENST00000527046 OFCC1Q8IZS5 231 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms