RNA–Protein interactions for RNA: ENST00000526280.1

SMPD1-202, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,344 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-202ENST00000526280 CCNA2P20248 432 aa11.6□□□□□ -0.55
SMPD1-202ENST00000526280 TNFRSF1BP20333 461 aa11.6□□□□□ -0.55
SMPD1-202ENST00000526280 SMSP52788 366 aa11.6□□□□□ -0.55
SMPD1-202ENST00000526280 RAC3P60763 192 aa11.6□□□□□ -0.55
SMPD1-202ENST00000526280 PON3Q15166 354 aa11.6□□□□□ -0.55
SMPD1-202ENST00000526280 SWT1Q5T5J6 900 aaKnown RBP11.6□□□□□ -0.55
SMPD1-202ENST00000526280 ULK3Q6PHR2 472 aa11.6□□□□□ -0.55
SMPD1-202ENST00000526280 TMPPEQ6ZT21 453 aa11.6□□□□□ -0.55
SMPD1-202ENST00000526280 VTCN1Q7Z7D3 282 aa11.6□□□□□ -0.55
SMPD1-202ENST00000526280 MRGPRGQ86SM5 289 aa11.6□□□□□ -0.55
SMPD1-202ENST00000526280 CARM1Q86X55 608 aa11.6□□□□□ -0.55
SMPD1-202ENST00000526280 C9orf106Q8NAJ2 232 aa11.6□□□□□ -0.55
SMPD1-202ENST00000526280 VANGL1Q8TAA9 524 aaPredicted RBP11.6□□□□□ -0.55
SMPD1-202ENST00000526280 FNDC9Q8TBE3 224 aa11.6□□□□□ -0.55
SMPD1-202ENST00000526280 ITLN2Q8WWU7 325 aaPredicted RBP11.6□□□□□ -0.55
SMPD1-202ENST00000526280 DDIT4LQ96D03 193 aa11.6□□□□□ -0.55
SMPD1-202ENST00000526280 ARL5BQ96KC2 179 aa11.6□□□□□ -0.55
SMPD1-202ENST00000526280 OR5B2Q96R09 309 aa11.6□□□□□ -0.55
SMPD1-202ENST00000526280 TM9SF2Q99805 663 aa11.6□□□□□ -0.55
SMPD1-202ENST00000526280 OR11A1Q9GZK7 315 aa11.6□□□□□ -0.55
SMPD1-202ENST00000526280 TIGARQ9NQ88 270 aa11.6□□□□□ -0.55
SMPD1-202ENST00000526280 DCAF13Q9NV06 445 aaKnown RBP11.6□□□□□ -0.55
SMPD1-202ENST00000526280 NKX1-2Q9UD57 310 aaPredicted RBP11.6□□□□□ -0.55
SMPD1-202ENST00000526280 Q9UFV3 132 aa11.6□□□□□ -0.55
SMPD1-202ENST00000526280 MAGEL2Q9UJ55 1249 aa11.6□□□□□ -0.55
SMPD1-202ENST00000526280 HDGFL3Q9Y3E1 203 aa11.6□□□□□ -0.55
SMPD1-202ENST00000526280 DOPEY1Q5JWR5 2465 aa11.59□□□□□ -0.55
SMPD1-202ENST00000526280 SETXQ7Z333 2677 aaKnown RBP11.59□□□□□ -0.55
SMPD1-202ENST00000526280 MED12LQ86YW9 2145 aa11.59□□□□□ -0.55
SMPD1-202ENST00000526280 HECTD1Q9ULT8 2610 aa11.59□□□□□ -0.55
SMPD1-202ENST00000526280 A0A0B4J2E0 115 aa11.59□□□□□ -0.55
SMPD1-202ENST00000526280 A0A1B0GX12 115 aa11.59□□□□□ -0.55
SMPD1-202ENST00000526280 ZC3H12DA2A288 527 aaKnown RBP11.59□□□□□ -0.55
SMPD1-202ENST00000526280 HSPB2A8KAH6 182 aa11.59□□□□□ -0.55
SMPD1-202ENST00000526280 CIB2O75838 187 aa11.59□□□□□ -0.55
SMPD1-202ENST00000526280 RCBTB2O95199 551 aa11.59□□□□□ -0.55
SMPD1-202ENST00000526280 IL2RAP01589 272 aa11.59□□□□□ -0.55
SMPD1-202ENST00000526280 PNMTP11086 282 aa11.59□□□□□ -0.55
SMPD1-202ENST00000526280 AGAP20933 346 aa11.59□□□□□ -0.55
SMPD1-202ENST00000526280 OR1E2P47887 323 aa11.59□□□□□ -0.55
SMPD1-202ENST00000526280 BNIP2Q12982 314 aa11.59□□□□□ -0.55
SMPD1-202ENST00000526280 MYBPHQ13203 477 aa11.59□□□□□ -0.55
SMPD1-202ENST00000526280 KPNB1Q14974 876 aaKnown RBP11.59□□□□□ -0.55
SMPD1-202ENST00000526280 HSPB2Q16082 182 aa11.59□□□□□ -0.55
SMPD1-202ENST00000526280 ALG10BQ5I7T1 473 aa11.59□□□□□ -0.55
SMPD1-202ENST00000526280 ENTPD8Q5MY95 495 aa11.59□□□□□ -0.55
SMPD1-202ENST00000526280 ZNF613Q6PF04 617 aa11.59□□□□□ -0.55
SMPD1-202ENST00000526280 XKRXQ6PP77 449 aa11.59□□□□□ -0.55
SMPD1-202ENST00000526280 TSPYL5Q86VY4 417 aaPredicted RBP11.59□□□□□ -0.55
SMPD1-202ENST00000526280 LSRQ86X29 649 aaPredicted RBP11.59□□□□□ -0.55
SMPD1-202ENST00000526280 CCDC71Q8IV32 467 aaPredicted RBP11.59□□□□□ -0.55
SMPD1-202ENST00000526280 ZNF808Q8N4W9 903 aaPredicted RBP11.59□□□□□ -0.55
SMPD1-202ENST00000526280 NAXEQ8NCW5 288 aa11.59□□□□□ -0.55
SMPD1-202ENST00000526280 SLC38A4Q969I6 547 aa11.59□□□□□ -0.55
SMPD1-202ENST00000526280 SLC47A1Q96FL8 570 aa11.59□□□□□ -0.55
SMPD1-202ENST00000526280 THTPAQ9BU02 230 aa11.59□□□□□ -0.55
SMPD1-202ENST00000526280 SRXN1Q9BYN0 137 aa11.59□□□□□ -0.55
SMPD1-202ENST00000526280 POTEKPQ9BYX7 375 aa11.59□□□□□ -0.55
SMPD1-202ENST00000526280 COQ3Q9NZJ6 369 aa11.59□□□□□ -0.55
SMPD1-202ENST00000526280 RPS6KA6Q9UK32 745 aa11.59□□□□□ -0.55
SMPD1-202ENST00000526280 MCTS1Q9ULC4 181 aaKnown RBP11.59□□□□□ -0.55
SMPD1-202ENST00000526280 RNF6Q9Y252 685 aa11.59□□□□□ -0.55
SMPD1-202ENST00000526280 TRAPPC4Q9Y296 219 aa11.59□□□□□ -0.55
SMPD1-202ENST00000526280 SNX13Q9Y5W8 968 aa11.59□□□□□ -0.55
SMPD1-202ENST00000526280 COL12A1Q99715 3063 aa11.58□□□□□ -0.56
SMPD1-202ENST00000526280 MPDZO75970 2070 aa11.58□□□□□ -0.56
SMPD1-202ENST00000526280 ELOA3DA6NLF2 546 aaPredicted RBP11.58□□□□□ -0.56
SMPD1-202ENST00000526280 CPSF4LA6NMK7 179 aaKnown RBP11.58□□□□□ -0.56
SMPD1-202ENST00000526280 A8MVM7 634 aa11.58□□□□□ -0.56
SMPD1-202ENST00000526280 SULT2B1O00204 365 aa11.58□□□□□ -0.56
SMPD1-202ENST00000526280 ARPC2O15144 300 aa11.58□□□□□ -0.56
SMPD1-202ENST00000526280 NPIPB7O75200 414 aa11.58□□□□□ -0.56
SMPD1-202ENST00000526280 ENTPD5O75356 428 aa11.58□□□□□ -0.56
SMPD1-202ENST00000526280 AQP8O94778 261 aa11.58□□□□□ -0.56
SMPD1-202ENST00000526280 SYNGR4O95473 234 aa11.58□□□□□ -0.56
SMPD1-202ENST00000526280 PMS2P2O95744 297 aa11.58□□□□□ -0.56
SMPD1-202ENST00000526280 CHRNB4P30926 498 aa11.58□□□□□ -0.56
SMPD1-202ENST00000526280 DIO1P49895 249 aa11.58□□□□□ -0.56
SMPD1-202ENST00000526280 CDH12P55289 794 aa11.58□□□□□ -0.56
SMPD1-202ENST00000526280 CSNK2A1P68400 391 aaPredicted RBP11.58□□□□□ -0.56
SMPD1-202ENST00000526280 ZNF239Q16600 458 aaKnown RBP11.58□□□□□ -0.56
SMPD1-202ENST00000526280 ELOA3BQ3SY89 546 aa11.58□□□□□ -0.56
SMPD1-202ENST00000526280 LINC00114Q6XXX2 140 aa11.58□□□□□ -0.56
SMPD1-202ENST00000526280 FKBP9P1Q75LS8 142 aa11.58□□□□□ -0.56
SMPD1-202ENST00000526280 P4HA3Q7Z4N8 544 aa11.58□□□□□ -0.56
SMPD1-202ENST00000526280 ELOA3Q8NG57 546 aa11.58□□□□□ -0.56
SMPD1-202ENST00000526280 LILRB4Q8NHJ6 448 aa11.58□□□□□ -0.56
SMPD1-202ENST00000526280 STK35Q8TDR2 534 aa11.58□□□□□ -0.56
SMPD1-202ENST00000526280 ADAMTS16Q8TE57 1224 aa11.58□□□□□ -0.56
SMPD1-202ENST00000526280 ASB5Q8WWX0 329 aa11.58□□□□□ -0.56
SMPD1-202ENST00000526280 GEMIN6Q8WXD5 167 aaKnown RBP11.58□□□□□ -0.56
SMPD1-202ENST00000526280 CPNE4Q96A23 557 aaPredicted RBP11.58□□□□□ -0.56
SMPD1-202ENST00000526280 SDCCAG3Q96C92 435 aa11.58□□□□□ -0.56
SMPD1-202ENST00000526280 HSH2DQ96JZ2 352 aa11.58□□□□□ -0.56
SMPD1-202ENST00000526280 ZFP3Q96NJ6 502 aa11.58□□□□□ -0.56
SMPD1-202ENST00000526280 DCLRE1BQ9H816 532 aa11.58□□□□□ -0.56
SMPD1-202ENST00000526280 RNF122Q9H9V4 155 aa11.58□□□□□ -0.56
SMPD1-202ENST00000526280 SELENONQ9NZV5 590 aa11.58□□□□□ -0.56
SMPD1-202ENST00000526280 INTS1Q8N201 2190 aaKnown RBP11.57□□□□□ -0.56
SMPD1-202ENST00000526280 A0A087WUJ7 227 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms