RNA–Protein interactions for RNA: ENST00000525504.5

CCDC90B-204, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,232 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-204ENST00000525504 HDAC3O15379 428 aa5.27□□□□□ -1.57
CCDC90B-204ENST00000525504 DNPH1O43598 174 aa5.27□□□□□ -1.57
CCDC90B-204ENST00000525504 AKAP8O43823 692 aaKnown RBP5.27□□□□□ -1.57
CCDC90B-204ENST00000525504 CYTIPO60759 359 aa5.27□□□□□ -1.57
CCDC90B-204ENST00000525504 SMPD2O60906 423 aa5.27□□□□□ -1.57
CCDC90B-204ENST00000525504 BCAS1O75363 584 aaPredicted RBP5.27□□□□□ -1.57
CCDC90B-204ENST00000525504 PGM3O95394 542 aa5.27□□□□□ -1.57
CCDC90B-204ENST00000525504 H6PDO95479 791 aa5.27□□□□□ -1.57
CCDC90B-204ENST00000525504 CSTAP01040 98 aa5.27□□□□□ -1.57
CCDC90B-204ENST00000525504 PGRP06401 933 aa5.27□□□□□ -1.57
CCDC90B-204ENST00000525504 ALDOCP09972 364 aaKnown RBP5.27□□□□□ -1.57
CCDC90B-204ENST00000525504 OR12D1P0DN82 309 aa5.27□□□□□ -1.57
CCDC90B-204ENST00000525504 UBL4AP11441 157 aa5.27□□□□□ -1.57
CCDC90B-204ENST00000525504 IL12AP29459 219 aa5.27□□□□□ -1.57
CCDC90B-204ENST00000525504 SFTPDP35247 375 aa5.27□□□□□ -1.57
CCDC90B-204ENST00000525504 APOBEC1P41238 236 aaKnown RBP5.27□□□□□ -1.57
CCDC90B-204ENST00000525504 OR3A2P47893 321 aa5.27□□□□□ -1.57
CCDC90B-204ENST00000525504 KCNJ5P48544 419 aa5.27□□□□□ -1.57
CCDC90B-204ENST00000525504 MAP2K6P52564 334 aa5.27□□□□□ -1.57
CCDC90B-204ENST00000525504 CLNS1AP54105 237 aaKnown RBP5.27□□□□□ -1.57
CCDC90B-204ENST00000525504 UFM1P61960 85 aa5.27□□□□□ -1.57
CCDC90B-204ENST00000525504 KCNJ10P78508 379 aa5.27□□□□□ -1.57
CCDC90B-204ENST00000525504 LRRC74AQ0VAA2 488 aa5.27□□□□□ -1.57
CCDC90B-204ENST00000525504 FUT5Q11128 374 aa5.27□□□□□ -1.57
CCDC90B-204ENST00000525504 CBFBQ13951 182 aa5.27□□□□□ -1.57
CCDC90B-204ENST00000525504 GPR68Q15743 365 aa5.27□□□□□ -1.57
CCDC90B-204ENST00000525504 MAPK11Q15759 364 aa5.27□□□□□ -1.57
CCDC90B-204ENST00000525504 PDCD2Q16342 344 aaPredicted RBP5.27□□□□□ -1.57
CCDC90B-204ENST00000525504 EXOC3L2Q2M3D2 409 aa5.27□□□□□ -1.57
CCDC90B-204ENST00000525504 NDUFAF6Q330K2 333 aa5.27□□□□□ -1.57
CCDC90B-204ENST00000525504 TIGD2Q4W5G0 525 aa5.27□□□□□ -1.57
CCDC90B-204ENST00000525504 TMEM201Q5SNT2 666 aa5.27□□□□□ -1.57
CCDC90B-204ENST00000525504 CEP85LQ5SZL2 805 aa5.27□□□□□ -1.57
CCDC90B-204ENST00000525504 SFRP5Q5T4F7 317 aa5.27□□□□□ -1.57
CCDC90B-204ENST00000525504 ATAD3BQ5T9A4 648 aa5.27□□□□□ -1.57
CCDC90B-204ENST00000525504 FBXW10Q5XX13 1052 aa5.27□□□□□ -1.57
CCDC90B-204ENST00000525504 FRRS1Q6ZNA5 592 aa5.27□□□□□ -1.57
CCDC90B-204ENST00000525504 PLEKHM3Q6ZWE6 761 aa5.27□□□□□ -1.57
CCDC90B-204ENST00000525504 SSX8Q7RTT4 187 aa5.27□□□□□ -1.57
CCDC90B-204ENST00000525504 MTDHQ86UE4 582 aaKnown RBP5.27□□□□□ -1.57
CCDC90B-204ENST00000525504 JAZF1Q86VZ6 243 aa5.27□□□□□ -1.57
CCDC90B-204ENST00000525504 ANKRD46Q86W74 232 aa5.27□□□□□ -1.57
CCDC90B-204ENST00000525504 ADGRG3Q86Y34 549 aa5.27□□□□□ -1.57
CCDC90B-204ENST00000525504 CMIPQ8IY22 773 aa5.27□□□□□ -1.57
CCDC90B-204ENST00000525504 CLEC4FQ8N1N0 589 aa5.27□□□□□ -1.57
CCDC90B-204ENST00000525504 ZNF611Q8N823 705 aa5.27□□□□□ -1.57
CCDC90B-204ENST00000525504 GLB1L3Q8NCI6 653 aaPredicted RBP5.27□□□□□ -1.57
CCDC90B-204ENST00000525504 OR5AK3PQ8NH89 298 aa5.27□□□□□ -1.57
CCDC90B-204ENST00000525504 LILRB1Q8NHL6 650 aaPredicted RBP5.27□□□□□ -1.57
CCDC90B-204ENST00000525504 ZFP90Q8TF47 636 aa5.27□□□□□ -1.57
CCDC90B-204ENST00000525504 GATAD2BQ8WXI9 593 aa5.27□□□□□ -1.57
CCDC90B-204ENST00000525504 TMEM234Q8WY98 164 aa5.27□□□□□ -1.57
CCDC90B-204ENST00000525504 ROPN1LQ96C74 230 aa5.27□□□□□ -1.57
CCDC90B-204ENST00000525504 PIK3IP1Q96FE7 263 aa5.27□□□□□ -1.57
CCDC90B-204ENST00000525504 CHMP6Q96FZ7 201 aa5.27□□□□□ -1.57
CCDC90B-204ENST00000525504 REXO5Q96IC2 774 aaKnown RBP5.27□□□□□ -1.57
CCDC90B-204ENST00000525504 MAELQ96JY0 434 aaKnown RBP5.27□□□□□ -1.57
CCDC90B-204ENST00000525504 C18orf12Q96KH6 178 aa5.27□□□□□ -1.57
CCDC90B-204ENST00000525504 TRNT1Q96Q11 434 aaKnown RBP5.27□□□□□ -1.57
CCDC90B-204ENST00000525504 PSD2Q9BQI7 771 aa5.27□□□□□ -1.57
CCDC90B-204ENST00000525504 THUMPD3Q9BV44 507 aaKnown RBP5.27□□□□□ -1.57
CCDC90B-204ENST00000525504 NUF2Q9BZD4 464 aa5.27□□□□□ -1.57
CCDC90B-204ENST00000525504 KLHL4Q9C0H6 718 aa5.27□□□□□ -1.57
CCDC90B-204ENST00000525504 ACTR6Q9GZN1 396 aa5.27□□□□□ -1.57
CCDC90B-204ENST00000525504 OR51I1Q9H343 314 aa5.27□□□□□ -1.57
CCDC90B-204ENST00000525504 MTHFD2LQ9H903 347 aaPredicted RBP5.27□□□□□ -1.57
CCDC90B-204ENST00000525504 SERINC1Q9NRX5 453 aa5.27□□□□□ -1.57
CCDC90B-204ENST00000525504 AIG1Q9NVV5 245 aa5.27□□□□□ -1.57
CCDC90B-204ENST00000525504 KLHL9Q9P2J3 617 aa5.27□□□□□ -1.57
CCDC90B-204ENST00000525504 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.27□□□□□ -1.57
CCDC90B-204ENST00000525504 MKLN1Q9UL63 735 aa5.27□□□□□ -1.57
CCDC90B-204ENST00000525504 TRAPPC4Q9Y296 219 aa5.27□□□□□ -1.57
CCDC90B-204ENST00000525504 SLC35A3Q9Y2D2 325 aa5.27□□□□□ -1.57
CCDC90B-204ENST00000525504 V9GYY5 206 aaPredicted RBP5.27□□□□□ -1.57
CCDC90B-204ENST00000525504 MED13LQ71F56 2210 aa5.27□□□□□ -1.57
CCDC90B-204ENST00000525504 ANK3Q12955 4377 aaKnown RBP5.27□□□□□ -1.57
CCDC90B-204ENST00000525504 HCFC1P51610 2035 aa5.26□□□□□ -1.57
CCDC90B-204ENST00000525504 HIVEP2P31629 2446 aa5.26□□□□□ -1.57
CCDC90B-204ENST00000525504 COL6A5A8TX70 2615 aa5.26□□□□□ -1.57
CCDC90B-204ENST00000525504 GOLGA8QA0A0J9YX86 632 aa5.26□□□□□ -1.57
CCDC90B-204ENST00000525504 GOLGA8OA6NCC3 632 aa5.26□□□□□ -1.57
CCDC90B-204ENST00000525504 CCDC154A6NI56 674 aa5.26□□□□□ -1.57
CCDC90B-204ENST00000525504 ZNF716A6NP11 495 aa5.26□□□□□ -1.57
CCDC90B-204ENST00000525504 E9PBE3 544 aa5.26□□□□□ -1.57
CCDC90B-204ENST00000525504 GOLGA8NF8WBI6 632 aa5.26□□□□□ -1.57
CCDC90B-204ENST00000525504 SLCO1B7G3V0H7 640 aa5.26□□□□□ -1.57
CCDC90B-204ENST00000525504 HMGN4O00479 90 aa5.26□□□□□ -1.57
CCDC90B-204ENST00000525504 KLF11O14901 512 aa5.26□□□□□ -1.57
CCDC90B-204ENST00000525504 SMAD9O15198 467 aaKnown RBP5.26□□□□□ -1.57
CCDC90B-204ENST00000525504 NUDT14O95848 222 aa5.26□□□□□ -1.57
CCDC90B-204ENST00000525504 PLAUP00749 431 aa5.26□□□□□ -1.57
CCDC90B-204ENST00000525504 ADAP00813 363 aa5.26□□□□□ -1.57
CCDC90B-204ENST00000525504 C1QCP02747 245 aa5.26□□□□□ -1.57
CCDC90B-204ENST00000525504 DANCRP0C864 163 aa5.26□□□□□ -1.57
CCDC90B-204ENST00000525504 UBTFL6P0CB48 400 aaPredicted RBP5.26□□□□□ -1.57
CCDC90B-204ENST00000525504 ZCCHC18P0CG32 403 aa5.26□□□□□ -1.57
CCDC90B-204ENST00000525504 PGCP20142 388 aa5.26□□□□□ -1.57
CCDC90B-204ENST00000525504 RPS4Y1P22090 263 aaKnown RBP5.26□□□□□ -1.57
CCDC90B-204ENST00000525504 S100A3P33764 101 aa5.26□□□□□ -1.57
CCDC90B-204ENST00000525504 HTR3AP46098 478 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms