RNA–Protein interactions for RNA: ENST00000525348.1

CD44-217, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 568 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-217ENST00000525348 KCNJ2P63252 427 aa3□□□□□ -1.93
CD44-217ENST00000525348 GALK2Q01415 458 aa3□□□□□ -1.93
CD44-217ENST00000525348 SLAQ13239 276 aa3□□□□□ -1.93
CD44-217ENST00000525348 POM121L1PQ3SYA9 428 aa3□□□□□ -1.93
CD44-217ENST00000525348 EPC2Q52LR7 807 aa3□□□□□ -1.93
CD44-217ENST00000525348 ZNF311Q5JNZ3 666 aa3□□□□□ -1.93
CD44-217ENST00000525348 GLRA4Q5JXX5 417 aa3□□□□□ -1.93
CD44-217ENST00000525348 BEND3Q5T5X7 828 aa3□□□□□ -1.93
CD44-217ENST00000525348 PIP5KL1Q5T9C9 394 aa3□□□□□ -1.93
CD44-217ENST00000525348 AGBL2Q5U5Z8 902 aa3□□□□□ -1.93
CD44-217ENST00000525348 MLIPQ5VWP3 458 aa3□□□□□ -1.93
CD44-217ENST00000525348 CYB5R2Q6BCY4 276 aa3□□□□□ -1.93
CD44-217ENST00000525348 TCEAL6Q6IPX3 200 aa3□□□□□ -1.93
CD44-217ENST00000525348 PAGE2Q7Z2X7 111 aa3□□□□□ -1.93
CD44-217ENST00000525348 BIVMQ86UB2 503 aa3□□□□□ -1.93
CD44-217ENST00000525348 IFT20Q8IY31 132 aa3□□□□□ -1.93
CD44-217ENST00000525348 THEM5Q8N1Q8 247 aa3□□□□□ -1.93
CD44-217ENST00000525348 C12orf29Q8N999 325 aa3□□□□□ -1.93
CD44-217ENST00000525348 OR8J1Q8NGP2 316 aa3□□□□□ -1.93
CD44-217ENST00000525348 ACTL9Q8TC94 416 aa3□□□□□ -1.93
CD44-217ENST00000525348 ITLN1Q8WWA0 313 aa3□□□□□ -1.93
CD44-217ENST00000525348 HAS2Q92819 552 aa3□□□□□ -1.93
CD44-217ENST00000525348 RIT1Q92963 219 aa3□□□□□ -1.93
CD44-217ENST00000525348 ISG20Q96AZ6 181 aaKnown RBP3□□□□□ -1.93
CD44-217ENST00000525348 TAMM41Q96BW9 452 aa3□□□□□ -1.93
CD44-217ENST00000525348 C14orf79Q96F83 325 aa3□□□□□ -1.93
CD44-217ENST00000525348 MRPL48Q96GC5 212 aaKnown RBP3□□□□□ -1.93
CD44-217ENST00000525348 B3GALT6Q96L58 329 aa3□□□□□ -1.93
CD44-217ENST00000525348 CYP2S1Q96SQ9 504 aa3□□□□□ -1.93
CD44-217ENST00000525348 MTG1Q9BT17 334 aaPredicted RBP3□□□□□ -1.93
CD44-217ENST00000525348 THUMPD3Q9BV44 507 aaKnown RBP3□□□□□ -1.93
CD44-217ENST00000525348 IDI2Q9BXS1 227 aa3□□□□□ -1.93
CD44-217ENST00000525348 STRADBQ9C0K7 418 aa3□□□□□ -1.93
CD44-217ENST00000525348 RAB33BQ9H082 229 aa3□□□□□ -1.93
CD44-217ENST00000525348 EXO5Q9H790 373 aa3□□□□□ -1.93
CD44-217ENST00000525348 MINDY3Q9H8M7 445 aa3□□□□□ -1.93
CD44-217ENST00000525348 LRRC40Q9H9A6 602 aa3□□□□□ -1.93
CD44-217ENST00000525348 PLGRKTQ9HBL7 147 aa3□□□□□ -1.93
CD44-217ENST00000525348 IL1RAPL2Q9NP60 686 aa3□□□□□ -1.93
CD44-217ENST00000525348 NT5MQ9NPB1 228 aa3□□□□□ -1.93
CD44-217ENST00000525348 CENPMQ9NSP4 180 aa3□□□□□ -1.93
CD44-217ENST00000525348 DEPPQ9NTK1 212 aa3□□□□□ -1.93
CD44-217ENST00000525348 DNAJC11Q9NVH1 559 aa3□□□□□ -1.93
CD44-217ENST00000525348 CLEC5AQ9NY25 188 aa3□□□□□ -1.93
CD44-217ENST00000525348 CYP39A1Q9NYL5 469 aa3□□□□□ -1.93
CD44-217ENST00000525348 IL20RAQ9UHF4 553 aa3□□□□□ -1.93
CD44-217ENST00000525348 SPACA6W5XKT8 324 aa3□□□□□ -1.93
CD44-217ENST00000525348 NCOA2Q15596 1464 aa3□□□□□ -1.93
CD44-217ENST00000525348 CLIP1P30622 1438 aa3□□□□□ -1.93
CD44-217ENST00000525348 RTL9Q8NET4 1388 aa3□□□□□ -1.93
CD44-217ENST00000525348 PARD3Q8TEW0 1356 aa3□□□□□ -1.93
CD44-217ENST00000525348 KDM5DQ9BY66 1539 aa2.99□□□□□ -1.93
CD44-217ENST00000525348 PZPP20742 1482 aa2.99□□□□□ -1.93
CD44-217ENST00000525348 A0A1B0GTH9 108 aa2.99□□□□□ -1.93
CD44-217ENST00000525348 SMIM31A0A1B0GVY4 71 aa2.99□□□□□ -1.93
CD44-217ENST00000525348 SRRM4A7MD48 611 aaKnown RBP2.99□□□□□ -1.93
CD44-217ENST00000525348 TCP11X1B4DZS4 312 aa2.99□□□□□ -1.93
CD44-217ENST00000525348 TMEM238C9JI98 176 aa2.99□□□□□ -1.93
CD44-217ENST00000525348 WRBO00258 174 aa2.99□□□□□ -1.93
CD44-217ENST00000525348 COCHO43405 550 aa2.99□□□□□ -1.93
CD44-217ENST00000525348 CALUO43852 315 aaPredicted RBP2.99□□□□□ -1.93
CD44-217ENST00000525348 DFNA5O60443 496 aa2.99□□□□□ -1.93
CD44-217ENST00000525348 GMDSO60547 372 aa2.99□□□□□ -1.93
CD44-217ENST00000525348 TSPAN2O60636 221 aa2.99□□□□□ -1.93
CD44-217ENST00000525348 TRIM3O75382 744 aaPredicted RBP2.99□□□□□ -1.93
CD44-217ENST00000525348 MTX2O75431 263 aa2.99□□□□□ -1.93
CD44-217ENST00000525348 OR7A10O76100 309 aa2.99□□□□□ -1.93
CD44-217ENST00000525348 AKR7A3O95154 331 aa2.99□□□□□ -1.93
CD44-217ENST00000525348 BRI3O95415 125 aa2.99□□□□□ -1.93
CD44-217ENST00000525348 DEXIO95424 95 aa2.99□□□□□ -1.93
CD44-217ENST00000525348 PGK1P00558 417 aa2.99□□□□□ -1.93
CD44-217ENST00000525348 OAS1P00973 400 aaKnown RBP2.99□□□□□ -1.93
CD44-217ENST00000525348 IL1BP01584 269 aa2.99□□□□□ -1.93
CD44-217ENST00000525348 MBP02144 154 aa2.99□□□□□ -1.93
CD44-217ENST00000525348 KLK3P07288 261 aaPredicted RBP2.99□□□□□ -1.93
CD44-217ENST00000525348 SERPINA6P08185 405 aa2.99□□□□□ -1.93
CD44-217ENST00000525348 CTXN2P0C2S0 81 aa2.99□□□□□ -1.93
CD44-217ENST00000525348 OR8G3PP0DMU2 310 aa2.99□□□□□ -1.93
CD44-217ENST00000525348 TCP1P17987 556 aaKnown RBP2.99□□□□□ -1.93
CD44-217ENST00000525348 TNNI1P19237 187 aa2.99□□□□□ -1.93
CD44-217ENST00000525348 MX1P20591 662 aa2.99□□□□□ -1.93
CD44-217ENST00000525348 PSMB6P28072 239 aa2.99□□□□□ -1.93
CD44-217ENST00000525348 CRABP1P29762 137 aa2.99□□□□□ -1.93
CD44-217ENST00000525348 CD79BP40259 229 aa2.99□□□□□ -1.93
CD44-217ENST00000525348 CASP3P42574 277 aa2.99□□□□□ -1.93
CD44-217ENST00000525348 OR3A3P47888 321 aa2.99□□□□□ -1.93
CD44-217ENST00000525348 ALDH3B2P48448 385 aa2.99□□□□□ -1.93
CD44-217ENST00000525348 SLC1A6P48664 564 aa2.99□□□□□ -1.93
CD44-217ENST00000525348 CDC34P49427 236 aaPredicted RBP2.99□□□□□ -1.93
CD44-217ENST00000525348 PSMD4P55036 377 aaKnown RBP2.99□□□□□ -1.93
CD44-217ENST00000525348 NUP107P57740 925 aa2.99□□□□□ -1.93
CD44-217ENST00000525348 GNGT1P63211 74 aa2.99□□□□□ -1.93
CD44-217ENST00000525348 HSF2Q03933 536 aa2.99□□□□□ -1.93
CD44-217ENST00000525348 CNTN1Q12860 1018 aa2.99□□□□□ -1.93
CD44-217ENST00000525348 TSPAN31Q12999 210 aa2.99□□□□□ -1.93
CD44-217ENST00000525348 BAMBIQ13145 260 aa2.99□□□□□ -1.93
CD44-217ENST00000525348 SELENBP1Q13228 472 aa2.99□□□□□ -1.93
CD44-217ENST00000525348 SRSF5Q13243 272 aaKnown RBP2.99□□□□□ -1.93
CD44-217ENST00000525348 IRF4Q15306 451 aa2.99□□□□□ -1.93
CD44-217ENST00000525348 MAPK11Q15759 364 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms