RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 GRNP28799 593 aaKnown RBP4.83□□□□□ -1.64
HMGB1P40-201ENST00000525121 AGTR1P30556 359 aa4.83□□□□□ -1.64
HMGB1P40-201ENST00000525121 SSTR2P30874 369 aa4.83□□□□□ -1.64
HMGB1P40-201ENST00000525121 KDELR2P33947 212 aa4.83□□□□□ -1.64
HMGB1P40-201ENST00000525121 KIR2DL3P43628 341 aa4.83□□□□□ -1.64
HMGB1P40-201ENST00000525121 GSK3BP49841 420 aa4.83□□□□□ -1.64
HMGB1P40-201ENST00000525121 TAS2R41P59536 307 aa4.83□□□□□ -1.64
HMGB1P40-201ENST00000525121 HOXC5Q00444 222 aa4.83□□□□□ -1.64
HMGB1P40-201ENST00000525121 SORDQ00796 357 aa4.83□□□□□ -1.64
HMGB1P40-201ENST00000525121 IL1RL1Q01638 556 aa4.83□□□□□ -1.64
HMGB1P40-201ENST00000525121 PLAURQ03405 335 aa4.83□□□□□ -1.64
HMGB1P40-201ENST00000525121 DMTNQ08495 405 aa4.83□□□□□ -1.64
HMGB1P40-201ENST00000525121 RASGEF1BQ0VAM2 473 aa4.83□□□□□ -1.64
HMGB1P40-201ENST00000525121 FOXF2Q12947 444 aa4.83□□□□□ -1.64
HMGB1P40-201ENST00000525121 KRT72Q14CN4 511 aa4.83□□□□□ -1.64
HMGB1P40-201ENST00000525121 MFSD13AQ14CX5 517 aa4.83□□□□□ -1.64
HMGB1P40-201ENST00000525121 OR7A5Q15622 319 aa4.83□□□□□ -1.64
HMGB1P40-201ENST00000525121 NRF1Q16656 503 aa4.83□□□□□ -1.64
HMGB1P40-201ENST00000525121 EXOC3L2Q2M3D2 409 aa4.83□□□□□ -1.64
HMGB1P40-201ENST00000525121 FBXL19-AS1Q494R0 122 aa4.83□□□□□ -1.64
HMGB1P40-201ENST00000525121 SPATS1Q496A3 300 aa4.83□□□□□ -1.64
HMGB1P40-201ENST00000525121 CYBRD1Q53TN4 286 aa4.83□□□□□ -1.64
HMGB1P40-201ENST00000525121 SAMD4BQ5PRF9 694 aaKnown RBP4.83□□□□□ -1.64
HMGB1P40-201ENST00000525121 C1orf140Q5VVS0 124 aa4.83□□□□□ -1.64
HMGB1P40-201ENST00000525121 FBXW10Q5XX13 1052 aa4.83□□□□□ -1.64
HMGB1P40-201ENST00000525121 ZNF613Q6PF04 617 aa4.83□□□□□ -1.64
HMGB1P40-201ENST00000525121 C6orf89Q6UWU4 347 aa4.83□□□□□ -1.64
HMGB1P40-201ENST00000525121 PLXDC2Q6UX71 529 aa4.83□□□□□ -1.64
HMGB1P40-201ENST00000525121 BEND4Q6ZU67 534 aa4.83□□□□□ -1.64
HMGB1P40-201ENST00000525121 FKBP9P1Q75LS8 142 aa4.83□□□□□ -1.64
HMGB1P40-201ENST00000525121 GDF7Q7Z4P5 450 aa4.83□□□□□ -1.64
HMGB1P40-201ENST00000525121 ATG4DQ86TL0 474 aaPredicted RBP4.83□□□□□ -1.64
HMGB1P40-201ENST00000525121 CYP4Z1Q86W10 505 aa4.83□□□□□ -1.64
HMGB1P40-201ENST00000525121 CARM1Q86X55 608 aa4.83□□□□□ -1.64
HMGB1P40-201ENST00000525121 ADGRG3Q86Y34 549 aa4.83□□□□□ -1.64
HMGB1P40-201ENST00000525121 LIX1LQ8IVB5 337 aa4.83□□□□□ -1.64
HMGB1P40-201ENST00000525121 SLC15A3Q8IY34 581 aa4.83□□□□□ -1.64
HMGB1P40-201ENST00000525121 ZNF100Q8IYN0 542 aa4.83□□□□□ -1.64
HMGB1P40-201ENST00000525121 PGAM4Q8N0Y7 254 aa4.83□□□□□ -1.64
HMGB1P40-201ENST00000525121 C10orf53Q8N6V4 93 aa4.83□□□□□ -1.64
HMGB1P40-201ENST00000525121 LSMEM1Q8N8F7 131 aa4.83□□□□□ -1.64
HMGB1P40-201ENST00000525121 STK35Q8TDR2 534 aa4.83□□□□□ -1.64
HMGB1P40-201ENST00000525121 ABHD3Q8WU67 409 aa4.83□□□□□ -1.64
HMGB1P40-201ENST00000525121 ROBO4Q8WZ75 1007 aa4.83□□□□□ -1.64
HMGB1P40-201ENST00000525121 SLC38A4Q969I6 547 aa4.83□□□□□ -1.64
HMGB1P40-201ENST00000525121 C3orf49Q96BT1 292 aa4.83□□□□□ -1.64
HMGB1P40-201ENST00000525121 TAMM41Q96BW9 452 aa4.83□□□□□ -1.64
HMGB1P40-201ENST00000525121 ZNF583Q96ND8 569 aa4.83□□□□□ -1.64
HMGB1P40-201ENST00000525121 ARHGDIGQ99819 225 aa4.83□□□□□ -1.64
HMGB1P40-201ENST00000525121 GPATCH1Q9BRR8 931 aaKnown RBP4.83□□□□□ -1.64
HMGB1P40-201ENST00000525121 ASPNQ9BXN1 380 aa4.83□□□□□ -1.64
HMGB1P40-201ENST00000525121 SRXN1Q9BYN0 137 aa4.83□□□□□ -1.64
HMGB1P40-201ENST00000525121 POTEKPQ9BYX7 375 aa4.83□□□□□ -1.64
HMGB1P40-201ENST00000525121 POLR2J2Q9GZM3 115 aaKnown RBP4.83□□□□□ -1.64
HMGB1P40-201ENST00000525121 ADAM19Q9H013 955 aa4.83□□□□□ -1.64
HMGB1P40-201ENST00000525121 POLR2J3Q9H1A7 115 aaKnown RBP4.83□□□□□ -1.64
HMGB1P40-201ENST00000525121 COQ10BQ9H8M1 238 aa4.83□□□□□ -1.64
HMGB1P40-201ENST00000525121 ARL8BQ9NVJ2 186 aa4.83□□□□□ -1.64
HMGB1P40-201ENST00000525121 CMTM6Q9NX76 183 aa4.83□□□□□ -1.64
HMGB1P40-201ENST00000525121 FAM53CQ9NYF3 392 aa4.83□□□□□ -1.64
HMGB1P40-201ENST00000525121 ELOVL5Q9NYP7 299 aa4.83□□□□□ -1.64
HMGB1P40-201ENST00000525121 NDRG3Q9UGV2 375 aa4.83□□□□□ -1.64
HMGB1P40-201ENST00000525121 MAGEL2Q9UJ55 1249 aa4.83□□□□□ -1.64
HMGB1P40-201ENST00000525121 RPS6KA6Q9UK32 745 aa4.83□□□□□ -1.64
HMGB1P40-201ENST00000525121 CLEC4AQ9UMR7 237 aa4.83□□□□□ -1.64
HMGB1P40-201ENST00000525121 SH3GLB1Q9Y371 365 aa4.83□□□□□ -1.64
HMGB1P40-201ENST00000525121 HELZ2Q9BYK8 2649 aaKnown RBP4.83□□□□□ -1.64
HMGB1P40-201ENST00000525121 RP1L1Q8IWN7 2480 aaPredicted RBP4.83□□□□□ -1.64
HMGB1P40-201ENST00000525121 POLEQ07864 2286 aa4.83□□□□□ -1.64
HMGB1P40-201ENST00000525121 GCN1Q92616 2671 aaKnown RBP4.82□□□□□ -1.64
HMGB1P40-201ENST00000525121 TRAV36DV7A0A075B6V5 113 aa4.82□□□□□ -1.64
HMGB1P40-201ENST00000525121 A0A0B4J2E0 115 aa4.82□□□□□ -1.64
HMGB1P40-201ENST00000525121 A0A1B0GX12 115 aa4.82□□□□□ -1.64
HMGB1P40-201ENST00000525121 TUBAL3A6NHL2 446 aa4.82□□□□□ -1.64
HMGB1P40-201ENST00000525121 LIPT2A6NK58 231 aa4.82□□□□□ -1.64
HMGB1P40-201ENST00000525121 CPSF4LA6NMK7 179 aaKnown RBP4.82□□□□□ -1.64
HMGB1P40-201ENST00000525121 ZNF724A8MTY0 619 aa4.82□□□□□ -1.64
HMGB1P40-201ENST00000525121 A8MXE2 369 aa4.82□□□□□ -1.64
HMGB1P40-201ENST00000525121 TMEM229AB2RXF0 380 aa4.82□□□□□ -1.64
HMGB1P40-201ENST00000525121 CASKO14936 926 aa4.82□□□□□ -1.64
HMGB1P40-201ENST00000525121 SMAD9O15198 467 aaKnown RBP4.82□□□□□ -1.64
HMGB1P40-201ENST00000525121 CHP2O43745 196 aa4.82□□□□□ -1.64
HMGB1P40-201ENST00000525121 AKAP8O43823 692 aaKnown RBP4.82□□□□□ -1.64
HMGB1P40-201ENST00000525121 EFNA2O43921 213 aa4.82□□□□□ -1.64
HMGB1P40-201ENST00000525121 TPST1O60507 370 aa4.82□□□□□ -1.64
HMGB1P40-201ENST00000525121 CYTIPO60759 359 aa4.82□□□□□ -1.64
HMGB1P40-201ENST00000525121 ADAM11O75078 769 aa4.82□□□□□ -1.64
HMGB1P40-201ENST00000525121 TNFSF13O75888 250 aa4.82□□□□□ -1.64
HMGB1P40-201ENST00000525121 KRT33AO76009 404 aa4.82□□□□□ -1.64
HMGB1P40-201ENST00000525121 VAMP5O95183 116 aa4.82□□□□□ -1.64
HMGB1P40-201ENST00000525121 HIST1H2ABP04908 130 aa4.82□□□□□ -1.64
HMGB1P40-201ENST00000525121 IFNW1P05000 195 aa4.82□□□□□ -1.64
HMGB1P40-201ENST00000525121 NQO1P15559 274 aaKnown RBP4.82□□□□□ -1.64
HMGB1P40-201ENST00000525121 FPR1P21462 350 aa4.82□□□□□ -1.64
HMGB1P40-201ENST00000525121 COL8A1P27658 744 aa4.82□□□□□ -1.64
HMGB1P40-201ENST00000525121 HTR2AP28223 471 aa4.82□□□□□ -1.64
HMGB1P40-201ENST00000525121 CD79BP40259 229 aa4.82□□□□□ -1.64
HMGB1P40-201ENST00000525121 KIR2DL2P43627 348 aaPredicted RBP4.82□□□□□ -1.64
HMGB1P40-201ENST00000525121 RPS5P46782 204 aaKnown RBP4.82□□□□□ -1.64
HMGB1P40-201ENST00000525121 GZMMP51124 257 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms