RNA–Protein interactions for RNA: ENST00000523328.5

PVT1-218, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best)

Gene PVT1, Length 343 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-218ENST00000523328 SOX7Q9BT81 388 aa19.85■□□□□ 0.77
PVT1-218ENST00000523328 DUSP26Q9BV47 211 aa19.85■□□□□ 0.77
PVT1-218ENST00000523328 UPB1Q9UBR1 384 aa19.85■□□□□ 0.77
PVT1-218ENST00000523328 TRAPPC4Q9Y296 219 aa19.85■□□□□ 0.77
PVT1-218ENST00000523328 LOC390937A0A1W2PQ73 354 aa19.84■□□□□ 0.77
PVT1-218ENST00000523328 KIAA0513O60268 411 aa19.84■□□□□ 0.77
PVT1-218ENST00000523328 TGFAP01135 160 aa19.84■□□□□ 0.77
PVT1-218ENST00000523328 PRPS1L1P21108 318 aa19.84■□□□□ 0.77
PVT1-218ENST00000523328 FKBP2P26885 142 aaKnown RBP19.84■□□□□ 0.77
PVT1-218ENST00000523328 RYKP34925 604 aa19.84■□□□□ 0.77
PVT1-218ENST00000523328 OR2B6P58173 313 aa19.84■□□□□ 0.77
PVT1-218ENST00000523328 PLAURQ03405 335 aa19.84■□□□□ 0.77
PVT1-218ENST00000523328 C6orf136Q5SQH8 315 aa19.84■□□□□ 0.77
PVT1-218ENST00000523328 C1QTNF12Q5T7M4 302 aa19.84■□□□□ 0.77
PVT1-218ENST00000523328 IL23RQ5VWK5 629 aa19.84■□□□□ 0.77
PVT1-218ENST00000523328 MYOZ1Q9NP98 299 aaPredicted RBP19.84■□□□□ 0.77
PVT1-218ENST00000523328 TMEM181Q9P2C4 612 aa19.84■□□□□ 0.77
PVT1-218ENST00000523328 MID2Q9UJV3 735 aa19.84■□□□□ 0.77
PVT1-218ENST00000523328 SLC35A3Q9Y2D2 325 aa19.84■□□□□ 0.77
PVT1-218ENST00000523328 SLC9A8Q9Y2E8 581 aa19.84■□□□□ 0.77
PVT1-218ENST00000523328 SHBGP04278 402 aa19.83■□□□□ 0.77
PVT1-218ENST00000523328 ZNF23P17027 643 aa19.83■□□□□ 0.77
PVT1-218ENST00000523328 KRT4P19013 534 aa19.83■□□□□ 0.77
PVT1-218ENST00000523328 PRPS1P60891 318 aa19.83■□□□□ 0.77
PVT1-218ENST00000523328 TGFBR3Q03167 851 aa19.83■□□□□ 0.77
PVT1-218ENST00000523328 CR1LQ2VPA4 569 aa19.83■□□□□ 0.77
PVT1-218ENST00000523328 ATP6AP1LQ52LC2 224 aa19.83■□□□□ 0.77
PVT1-218ENST00000523328 AP1ARQ63HQ0 302 aa19.83■□□□□ 0.77
PVT1-218ENST00000523328 TYW3Q6IPR3 259 aaKnown RBP19.83■□□□□ 0.77
PVT1-218ENST00000523328 EMBQ6PCB8 327 aa19.83■□□□□ 0.77
PVT1-218ENST00000523328 IFT20Q8IY31 132 aa19.83■□□□□ 0.77
PVT1-218ENST00000523328 ANKS4BQ8N8V4 417 aa19.83■□□□□ 0.77
PVT1-218ENST00000523328 OIT3Q8WWZ8 545 aa19.83■□□□□ 0.77
PVT1-218ENST00000523328 SLC35G5Q96KT7 338 aa19.83■□□□□ 0.77
PVT1-218ENST00000523328 BPESC1Q9GZL8 116 aa19.83■□□□□ 0.77
PVT1-218ENST00000523328 PARPBPQ9NWS1 579 aa19.83■□□□□ 0.77
PVT1-218ENST00000523328 NPHS1O60500 1241 aa19.82■□□□□ 0.76
PVT1-218ENST00000523328 SLU7O95391 586 aaKnown RBP19.82■□□□□ 0.76
PVT1-218ENST00000523328 GUSBP08236 651 aa19.82■□□□□ 0.76
PVT1-218ENST00000523328 MPGP29372 298 aa19.82■□□□□ 0.76
PVT1-218ENST00000523328 SNRPD2P62316 118 aaKnown RBP19.82■□□□□ 0.76
PVT1-218ENST00000523328 SLC17A1Q14916 467 aa19.82■□□□□ 0.76
PVT1-218ENST00000523328 CARTPTQ16568 116 aa19.82■□□□□ 0.76
PVT1-218ENST00000523328 C16orf62Q7Z3J2 963 aa19.82■□□□□ 0.76
PVT1-218ENST00000523328 CLECL1Q8IZS7 167 aa19.82■□□□□ 0.76
PVT1-218ENST00000523328 C4orf33Q8N1A6 199 aa19.82■□□□□ 0.76
PVT1-218ENST00000523328 FNDC5Q8NAU1 212 aa19.82■□□□□ 0.76
PVT1-218ENST00000523328 AGR3Q8TD06 166 aa19.82■□□□□ 0.76
PVT1-218ENST00000523328 MIPOL1Q8TD10 442 aa19.82■□□□□ 0.76
PVT1-218ENST00000523328 ZG16BQ96DA0 208 aa19.82■□□□□ 0.76
PVT1-218ENST00000523328 C1orf159Q96HA4 380 aa19.82■□□□□ 0.76
PVT1-218ENST00000523328 BOD1Q96IK1 185 aa19.82■□□□□ 0.76
PVT1-218ENST00000523328 SAP130Q9H0E3 1048 aa19.82■□□□□ 0.76
PVT1-218ENST00000523328 OR51I1Q9H343 314 aa19.82■□□□□ 0.76
PVT1-218ENST00000523328 RNF103-CHMP3A0A140T963 221 aa19.81■□□□□ 0.76
PVT1-218ENST00000523328 EIF1BO60739 113 aaKnown RBP19.81■□□□□ 0.76
PVT1-218ENST00000523328 WNT11O96014 354 aa19.81■□□□□ 0.76
PVT1-218ENST00000523328 IMPDH2P12268 514 aa19.81■□□□□ 0.76
PVT1-218ENST00000523328 CCNA2P20248 432 aa19.81■□□□□ 0.76
PVT1-218ENST00000523328 FUT5Q11128 374 aa19.81■□□□□ 0.76
PVT1-218ENST00000523328 IQCCQ4KMZ1 466 aa19.81■□□□□ 0.76
PVT1-218ENST00000523328 RFLNBQ8N5W9 214 aa19.81■□□□□ 0.76
PVT1-218ENST00000523328 VRK1Q99986 396 aaPredicted RBP19.81■□□□□ 0.76
PVT1-218ENST00000523328 EXOSC3Q9NQT5 275 aaKnown RBP19.81■□□□□ 0.76
PVT1-218ENST00000523328 EXD2Q9NVH0 621 aa19.81■□□□□ 0.76
PVT1-218ENST00000523328 WDR45Q9Y484 360 aa19.81■□□□□ 0.76
PVT1-218ENST00000523328 IGHV1-18A0A0C4DH31 117 aa19.8■□□□□ 0.76
PVT1-218ENST00000523328 CLDN24A6NM45 220 aa19.8■□□□□ 0.76
PVT1-218ENST00000523328 ALDH3A1P30838 453 aa19.8■□□□□ 0.76
PVT1-218ENST00000523328 SERPINF1P36955 418 aa19.8■□□□□ 0.76
PVT1-218ENST00000523328 SLC35A1P78382 337 aa19.8■□□□□ 0.76
PVT1-218ENST00000523328 KCNJ10P78508 379 aa19.8■□□□□ 0.76
PVT1-218ENST00000523328 HIKESHIQ53FT3 197 aa19.8■□□□□ 0.76
PVT1-218ENST00000523328 FRRS1Q6ZNA5 592 aa19.8■□□□□ 0.76
PVT1-218ENST00000523328 SLC46A3Q7Z3Q1 461 aa19.8■□□□□ 0.76
PVT1-218ENST00000523328 TMEM45BQ96B21 275 aa19.8■□□□□ 0.76
PVT1-218ENST00000523328 POLE3Q9NRF9 147 aa19.8■□□□□ 0.76
PVT1-218ENST00000523328 CA10Q9NS85 328 aa19.8■□□□□ 0.76
PVT1-218ENST00000523328 PCDHGB4Q9UN71 923 aa19.8■□□□□ 0.76
PVT1-218ENST00000523328 TMED7-TICAM2A0A0A6YYA0 188 aa19.79■□□□□ 0.76
PVT1-218ENST00000523328 TMEM72A0PK05 275 aa19.79■□□□□ 0.76
PVT1-218ENST00000523328 SMIM23A6NLE4 172 aa19.79■□□□□ 0.76
PVT1-218ENST00000523328 KLF11O14901 512 aa19.79■□□□□ 0.76
PVT1-218ENST00000523328 TCF21O43680 179 aa19.79■□□□□ 0.76
PVT1-218ENST00000523328 OR12D1P0DN82 309 aa19.79■□□□□ 0.76
PVT1-218ENST00000523328 G6PDP11413 515 aa19.79■□□□□ 0.76
PVT1-218ENST00000523328 ARRB2P32121 409 aa19.79■□□□□ 0.76
PVT1-218ENST00000523328 IDH2P48735 452 aaKnown RBP19.79■□□□□ 0.76
PVT1-218ENST00000523328 PGS1Q32NB8 556 aa19.79■□□□□ 0.76
PVT1-218ENST00000523328 OR4F3Q6IEY1 312 aa19.79■□□□□ 0.76
PVT1-218ENST00000523328 KLHL24Q6TFL4 600 aa19.79■□□□□ 0.76
PVT1-218ENST00000523328 HMGN2P46Q86SG4 172 aa19.79■□□□□ 0.76
PVT1-218ENST00000523328 ARFGAP2Q8N6H7 521 aa19.79■□□□□ 0.76
PVT1-218ENST00000523328 ZIC4Q8N9L1 334 aa19.79■□□□□ 0.76
PVT1-218ENST00000523328 ZNF540Q8NDQ6 660 aa19.79■□□□□ 0.76
PVT1-218ENST00000523328 XAGE5Q8WWM1 108 aa19.79■□□□□ 0.76
PVT1-218ENST00000523328 RAB8BQ92930 207 aa19.79■□□□□ 0.76
PVT1-218ENST00000523328 NAA11Q9BSU3 229 aaPredicted RBP19.79■□□□□ 0.76
PVT1-218ENST00000523328 MECRQ9BV79 373 aa19.79■□□□□ 0.76
PVT1-218ENST00000523328 OSGIN1Q9UJX0 560 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms