RNA–Protein interactions for RNA: ENST00000522387.5

PABPC1-219, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-219ENST00000522387 OR1Q1Q15612 314 aa11.24□□□□□ -0.61
PABPC1-219ENST00000522387 SLC16A12Q6ZSM3 486 aa11.24□□□□□ -0.61
PABPC1-219ENST00000522387 PLEKHM3Q6ZWE6 761 aa11.24□□□□□ -0.61
PABPC1-219ENST00000522387 YRDCQ86U90 279 aaKnown RBP11.24□□□□□ -0.61
PABPC1-219ENST00000522387 CYP4Z1Q86W10 505 aa11.24□□□□□ -0.61
PABPC1-219ENST00000522387 ARHGDIGQ99819 225 aa11.24□□□□□ -0.61
PABPC1-219ENST00000522387 RBM4BQ9BQ04 359 aaKnown RBP11.24□□□□□ -0.61
PABPC1-219ENST00000522387 RBM4Q9BWF3 364 aaKnown RBP11.24□□□□□ -0.61
PABPC1-219ENST00000522387 SLC7A7Q9UM01 511 aa11.24□□□□□ -0.61
PABPC1-219ENST00000522387 THY1P04216 161 aa11.23□□□□□ -0.61
PABPC1-219ENST00000522387 NGFRP08138 427 aa11.23□□□□□ -0.61
PABPC1-219ENST00000522387 PEPDP12955 493 aa11.23□□□□□ -0.61
PABPC1-219ENST00000522387 GDF1P27539 372 aa11.23□□□□□ -0.61
PABPC1-219ENST00000522387 MAGEA5P43359 124 aa11.23□□□□□ -0.61
PABPC1-219ENST00000522387 COPZ1P61923 177 aa11.23□□□□□ -0.61
PABPC1-219ENST00000522387 RPP38P78345 283 aaKnown RBP11.23□□□□□ -0.61
PABPC1-219ENST00000522387 LAIR2Q6ISS4 152 aa11.23□□□□□ -0.61
PABPC1-219ENST00000522387 SLC30A6Q6NXT4 461 aa11.23□□□□□ -0.61
PABPC1-219ENST00000522387 RANBP3LQ86VV4 465 aaPredicted RBP11.23□□□□□ -0.61
PABPC1-219ENST00000522387 PLCZ1Q86YW0 608 aa11.23□□□□□ -0.61
PABPC1-219ENST00000522387 RBMXL3Q8N7X1 1067 aaKnown RBP11.23□□□□□ -0.61
PABPC1-219ENST00000522387 ZNF300Q96RE9 604 aaPredicted RBP11.23□□□□□ -0.61
PABPC1-219ENST00000522387 NEURL2Q9BR09 285 aa11.23□□□□□ -0.61
PABPC1-219ENST00000522387 INIPQ9NRY2 104 aa11.23□□□□□ -0.61
PABPC1-219ENST00000522387 TMEFF2Q9UIK5 374 aaPredicted RBP11.23□□□□□ -0.61
PABPC1-219ENST00000522387 ENPP5Q9UJA9 477 aa11.23□□□□□ -0.61
PABPC1-219ENST00000522387 PCDHGA9Q9Y5G4 932 aaKnown RBP11.23□□□□□ -0.61
PABPC1-219ENST00000522387 NME2P1O60361 137 aa11.23□□□□□ -0.61
PABPC1-219ENST00000522387 SEMG1P04279 462 aa11.23□□□□□ -0.61
PABPC1-219ENST00000522387 IL11P20809 199 aa11.23□□□□□ -0.61
PABPC1-219ENST00000522387 NME2P22392 152 aa11.23□□□□□ -0.61
PABPC1-219ENST00000522387 IDUAP35475 653 aa11.23□□□□□ -0.61
PABPC1-219ENST00000522387 GSSP48637 474 aa11.23□□□□□ -0.61
PABPC1-219ENST00000522387 RAD23AP54725 363 aa11.23□□□□□ -0.61
PABPC1-219ENST00000522387 FOXO1Q12778 655 aa11.23□□□□□ -0.61
PABPC1-219ENST00000522387 SNTA1Q13424 505 aa11.23□□□□□ -0.61
PABPC1-219ENST00000522387 ZNF846Q147U1 533 aa11.23□□□□□ -0.61
PABPC1-219ENST00000522387 QPRTQ15274 297 aa11.23□□□□□ -0.61
PABPC1-219ENST00000522387 TRIM16LQ309B1 348 aa11.23□□□□□ -0.61
PABPC1-219ENST00000522387 PLEKHN1Q494U1 663 aaPredicted RBP11.23□□□□□ -0.61
PABPC1-219ENST00000522387 IQCCQ4KMZ1 466 aa11.23□□□□□ -0.61
PABPC1-219ENST00000522387 RNFT1Q5M7Z0 435 aa11.23□□□□□ -0.61
PABPC1-219ENST00000522387 TIGD3Q6B0B8 471 aa11.23□□□□□ -0.61
PABPC1-219ENST00000522387 OR2T5Q6IEZ7 315 aa11.23□□□□□ -0.61
PABPC1-219ENST00000522387 IGFL2Q6UWQ7 119 aa11.23□□□□□ -0.61
PABPC1-219ENST00000522387 PIWIL3Q7Z3Z3 882 aaKnown RBP11.23□□□□□ -0.61
PABPC1-219ENST00000522387 NKAIN4Q8IVV8 208 aa11.23□□□□□ -0.61
PABPC1-219ENST00000522387 DND1Q8IYX4 353 aaKnown RBP11.23□□□□□ -0.61
PABPC1-219ENST00000522387 PARP8Q8N3A8 854 aa11.23□□□□□ -0.61
PABPC1-219ENST00000522387 TOR1AIP2Q8NFQ8 470 aa11.23□□□□□ -0.61
PABPC1-219ENST00000522387 OR2T29Q8NH02 315 aa11.23□□□□□ -0.61
PABPC1-219ENST00000522387 OR5W2Q8NH69 310 aa11.23□□□□□ -0.61
PABPC1-219ENST00000522387 PMM1Q92871 262 aa11.23□□□□□ -0.61
PABPC1-219ENST00000522387 UBL7Q96S82 380 aaPredicted RBP11.23□□□□□ -0.61
PABPC1-219ENST00000522387 ZNF347Q96SE7 839 aa11.23□□□□□ -0.61
PABPC1-219ENST00000522387 TTTY12Q9BZ98 90 aa11.23□□□□□ -0.61
PABPC1-219ENST00000522387 LAT2Q9GZY6 243 aa11.23□□□□□ -0.61
PABPC1-219ENST00000522387 MAGIXQ9H6Y5 334 aa11.23□□□□□ -0.61
PABPC1-219ENST00000522387 NMNAT1Q9HAN9 279 aaPredicted RBP11.23□□□□□ -0.61
PABPC1-219ENST00000522387 SDHAF3Q9NRP4 125 aa11.23□□□□□ -0.61
PABPC1-219ENST00000522387 PDP1Q9P0J1 537 aaPredicted RBP11.23□□□□□ -0.61
PABPC1-219ENST00000522387 A4GNTQ9UNA3 340 aa11.23□□□□□ -0.61
PABPC1-219ENST00000522387 ENPP4Q9Y6X5 453 aa11.23□□□□□ -0.61
PABPC1-219ENST00000522387 LOC100130705A0A1B0GUX0 176 aa11.22□□□□□ -0.61
PABPC1-219ENST00000522387 TMEM8BA6NDV4 472 aa11.22□□□□□ -0.61
PABPC1-219ENST00000522387 LRRC3CA6NJW4 275 aa11.22□□□□□ -0.61
PABPC1-219ENST00000522387 PTGES3LE9PB15 166 aa11.22□□□□□ -0.61
PABPC1-219ENST00000522387 SLC1A7O00341 560 aa11.22□□□□□ -0.61
PABPC1-219ENST00000522387 SYT5O00445 386 aa11.22□□□□□ -0.61
PABPC1-219ENST00000522387 INMTO95050 263 aa11.22□□□□□ -0.61
PABPC1-219ENST00000522387 SNX4O95219 450 aa11.22□□□□□ -0.61
PABPC1-219ENST00000522387 DPP4P27487 766 aa11.22□□□□□ -0.61
PABPC1-219ENST00000522387 ADH7P40394 386 aa11.22□□□□□ -0.61
PABPC1-219ENST00000522387 MAGEA2P43356 314 aa11.22□□□□□ -0.61
PABPC1-219ENST00000522387 DAPP51397 102 aa11.22□□□□□ -0.61
PABPC1-219ENST00000522387 CBFBQ13951 182 aa11.22□□□□□ -0.61
PABPC1-219ENST00000522387 ELOAQ14241 798 aaKnown RBP11.22□□□□□ -0.61
PABPC1-219ENST00000522387 ALG10BQ5I7T1 473 aa11.22□□□□□ -0.61
PABPC1-219ENST00000522387 CMIPQ8IY22 773 aa11.22□□□□□ -0.61
PABPC1-219ENST00000522387 EXD3Q8N9H8 876 aa11.22□□□□□ -0.61
PABPC1-219ENST00000522387 FAM71CQ8NEG0 241 aa11.22□□□□□ -0.61
PABPC1-219ENST00000522387 OR2M3Q8NG83 312 aa11.22□□□□□ -0.61
PABPC1-219ENST00000522387 OR5K1Q8NHB7 308 aa11.22□□□□□ -0.61
PABPC1-219ENST00000522387 GPR119Q8TDV5 335 aa11.22□□□□□ -0.61
PABPC1-219ENST00000522387 SMPDL3BQ92485 455 aa11.22□□□□□ -0.61
PABPC1-219ENST00000522387 TM9SF4Q92544 642 aa11.22□□□□□ -0.61
PABPC1-219ENST00000522387 FNDC11Q9BVV2 318 aa11.22□□□□□ -0.61
PABPC1-219ENST00000522387 CCDC90BQ9GZT6 254 aa11.22□□□□□ -0.61
PABPC1-219ENST00000522387 DEFB127Q9H1M4 99 aa11.22□□□□□ -0.61
PABPC1-219ENST00000522387 RPS6KB2Q9UBS0 482 aa11.22□□□□□ -0.61
PABPC1-219ENST00000522387 DKKL1Q9UK85 242 aa11.22□□□□□ -0.61
PABPC1-219ENST00000522387 SAMHD1Q9Y3Z3 626 aaKnown RBP11.22□□□□□ -0.61
PABPC1-219ENST00000522387 CFAP46Q8IYW2 2715 aa11.22□□□□□ -0.61
PABPC1-219ENST00000522387 A0A1B0GWA3 101 aa11.21□□□□□ -0.61
PABPC1-219ENST00000522387 CLDN25C9JDP6 229 aa11.21□□□□□ -0.61
PABPC1-219ENST00000522387 H3BML4 177 aa11.21□□□□□ -0.61
PABPC1-219ENST00000522387 KLRC4-KLRK1H3BQV0 150 aa11.21□□□□□ -0.61
PABPC1-219ENST00000522387 TRIM3O75382 744 aaPredicted RBP11.21□□□□□ -0.61
PABPC1-219ENST00000522387 ITGB2P05107 769 aa11.21□□□□□ -0.61
PABPC1-219ENST00000522387 GUSBP08236 651 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms