RNA–Protein interactions for RNA: ENST00000522013.5

CTNNA1-232, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 874 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-232ENST00000522013 ROPN1BQ9BZX4 212 aaPredicted RBP4.4□□□□□ -1.71
CTNNA1-232ENST00000522013 OR8D2Q9GZM6 311 aa4.4□□□□□ -1.71
CTNNA1-232ENST00000522013 PCBD2Q9H0N5 130 aa4.4□□□□□ -1.71
CTNNA1-232ENST00000522013 ROPN1Q9HAT0 212 aaPredicted RBP4.4□□□□□ -1.71
CTNNA1-232ENST00000522013 WWOXQ9NZC7 414 aa4.4□□□□□ -1.71
CTNNA1-232ENST00000522013 NUDT4Q9NZJ9 180 aa4.4□□□□□ -1.71
CTNNA1-232ENST00000522013 CD274Q9NZQ7 290 aa4.4□□□□□ -1.71
CTNNA1-232ENST00000522013 TMEM216Q9P0N5 145 aa4.4□□□□□ -1.71
CTNNA1-232ENST00000522013 CPSF2Q9P2I0 782 aaKnown RBP4.4□□□□□ -1.71
CTNNA1-232ENST00000522013 CLCF1Q9UBD9 225 aa4.4□□□□□ -1.71
CTNNA1-232ENST00000522013 LGALS13Q9UHV8 139 aa4.4□□□□□ -1.71
CTNNA1-232ENST00000522013 PTBP2Q9UKA9 531 aaKnown RBP4.4□□□□□ -1.71
CTNNA1-232ENST00000522013 PROCRQ9UNN8 238 aa4.4□□□□□ -1.71
CTNNA1-232ENST00000522013 DTX4Q9Y2E6 619 aa4.4□□□□□ -1.71
CTNNA1-232ENST00000522013 CLCA3PQ9Y6N3 262 aa4.4□□□□□ -1.71
CTNNA1-232ENST00000522013 EPPK1P58107 5090 aaKnown RBP4.39□□□□□ -1.71
CTNNA1-232ENST00000522013 IGHV4-61A0A0C4DH41 118 aa4.39□□□□□ -1.71
CTNNA1-232ENST00000522013 SYCE1LA8MT33 242 aa4.39□□□□□ -1.71
CTNNA1-232ENST00000522013 COPEO14579 308 aa4.39□□□□□ -1.71
CTNNA1-232ENST00000522013 NDUFS4O43181 175 aa4.39□□□□□ -1.71
CTNNA1-232ENST00000522013 GALR3O60755 368 aaPredicted RBP4.39□□□□□ -1.71
CTNNA1-232ENST00000522013 STK16O75716 305 aa4.39□□□□□ -1.71
CTNNA1-232ENST00000522013 LY6HO94772 140 aa4.39□□□□□ -1.71
CTNNA1-232ENST00000522013 TGM6O95932 706 aa4.39□□□□□ -1.71
CTNNA1-232ENST00000522013 HPNP05981 417 aa4.39□□□□□ -1.71
CTNNA1-232ENST00000522013 SPARCP09486 303 aa4.39□□□□□ -1.71
CTNNA1-232ENST00000522013 NPSP0C0P6 89 aa4.39□□□□□ -1.71
CTNNA1-232ENST00000522013 CDH1P12830 882 aa4.39□□□□□ -1.71
CTNNA1-232ENST00000522013 RNH1P13489 461 aaKnown RBP4.39□□□□□ -1.71
CTNNA1-232ENST00000522013 GFAPP14136 432 aa4.39□□□□□ -1.71
CTNNA1-232ENST00000522013 H2AFXP16104 143 aaPredicted RBP4.39□□□□□ -1.71
CTNNA1-232ENST00000522013 KRT4P19013 534 aa4.39□□□□□ -1.71
CTNNA1-232ENST00000522013 EPORP19235 508 aa4.39□□□□□ -1.71
CTNNA1-232ENST00000522013 MTNR1AP48039 350 aa4.39□□□□□ -1.71
CTNNA1-232ENST00000522013 PCYT1AP49585 367 aa4.39□□□□□ -1.71
CTNNA1-232ENST00000522013 HNMTP50135 292 aa4.39□□□□□ -1.71
CTNNA1-232ENST00000522013 PDLIM4P50479 330 aa4.39□□□□□ -1.71
CTNNA1-232ENST00000522013 CDK9P50750 372 aaKnown RBP4.39□□□□□ -1.71
CTNNA1-232ENST00000522013 EEFSECP57772 596 aaKnown RBP4.39□□□□□ -1.71
CTNNA1-232ENST00000522013 C21orf58P58505 322 aa4.39□□□□□ -1.71
CTNNA1-232ENST00000522013 UFM1P61960 85 aa4.39□□□□□ -1.71
CTNNA1-232ENST00000522013 CFHR3Q02985 330 aa4.39□□□□□ -1.71
CTNNA1-232ENST00000522013 SLC18A2Q05940 514 aa4.39□□□□□ -1.71
CTNNA1-232ENST00000522013 ALKBH1Q13686 389 aaKnown RBP4.39□□□□□ -1.71
CTNNA1-232ENST00000522013 DOC2AQ14183 400 aa4.39□□□□□ -1.71
CTNNA1-232ENST00000522013 MFSD13AQ14CX5 517 aa4.39□□□□□ -1.71
CTNNA1-232ENST00000522013 SLC9B1Q4ZJI4 515 aa4.39□□□□□ -1.71
CTNNA1-232ENST00000522013 NHSL2Q5HYW2 709 aa4.39□□□□□ -1.71
CTNNA1-232ENST00000522013 CEP85LQ5SZL2 805 aa4.39□□□□□ -1.71
CTNNA1-232ENST00000522013 C1QTNF12Q5T7M4 302 aa4.39□□□□□ -1.71
CTNNA1-232ENST00000522013 AGAP6Q5VW22 663 aa4.39□□□□□ -1.71
CTNNA1-232ENST00000522013 GPR139Q6DWJ6 353 aa4.39□□□□□ -1.71
CTNNA1-232ENST00000522013 KLC3Q6P597 504 aa4.39□□□□□ -1.71
CTNNA1-232ENST00000522013 LCTLQ6UWM7 567 aa4.39□□□□□ -1.71
CTNNA1-232ENST00000522013 ENPP6Q6UWR7 440 aa4.39□□□□□ -1.71
CTNNA1-232ENST00000522013 IKBIPQ70UQ0 350 aa4.39□□□□□ -1.71
CTNNA1-232ENST00000522013 CHMP1BQ7LBR1 199 aa4.39□□□□□ -1.71
CTNNA1-232ENST00000522013 RRM2BQ7LG56 351 aa4.39□□□□□ -1.71
CTNNA1-232ENST00000522013 LRRC70Q7Z2Q7 622 aa4.39□□□□□ -1.71
CTNNA1-232ENST00000522013 SZRD1Q7Z422 152 aa4.39□□□□□ -1.71
CTNNA1-232ENST00000522013 BCDIN3DQ7Z5W3 292 aaKnown RBP4.39□□□□□ -1.71
CTNNA1-232ENST00000522013 YRDCQ86U90 279 aaKnown RBP4.39□□□□□ -1.71
CTNNA1-232ENST00000522013 LCA5Q86VQ0 697 aa4.39□□□□□ -1.71
CTNNA1-232ENST00000522013 C17orf64Q86WR6 236 aa4.39□□□□□ -1.71
CTNNA1-232ENST00000522013 CNPY4Q8N129 248 aa4.39□□□□□ -1.71
CTNNA1-232ENST00000522013 C4orf33Q8N1A6 199 aa4.39□□□□□ -1.71
CTNNA1-232ENST00000522013 ZNF619Q8N2I2 560 aa4.39□□□□□ -1.71
CTNNA1-232ENST00000522013 RIBC1Q8N443 379 aaPredicted RBP4.39□□□□□ -1.71
CTNNA1-232ENST00000522013 ZNF321PQ8N8H1 164 aa4.39□□□□□ -1.71
CTNNA1-232ENST00000522013 ZNF740Q8NDX6 193 aa4.39□□□□□ -1.71
CTNNA1-232ENST00000522013 FAM83FQ8NEG4 500 aaPredicted RBP4.39□□□□□ -1.71
CTNNA1-232ENST00000522013 OR10G3Q8NGC4 313 aa4.39□□□□□ -1.71
CTNNA1-232ENST00000522013 RDH11Q8TC12 318 aa4.39□□□□□ -1.71
CTNNA1-232ENST00000522013 UBTD2Q8WUN7 234 aa4.39□□□□□ -1.71
CTNNA1-232ENST00000522013 SLC5A11Q8WWX8 675 aa4.39□□□□□ -1.71
CTNNA1-232ENST00000522013 RAB40AQ8WXH6 277 aa4.39□□□□□ -1.71
CTNNA1-232ENST00000522013 NEIL2Q969S2 332 aa4.39□□□□□ -1.71
CTNNA1-232ENST00000522013 ATP6V1E2Q96A05 226 aa4.39□□□□□ -1.71
CTNNA1-232ENST00000522013 SPACA9Q96E40 222 aaPredicted RBP4.39□□□□□ -1.71
CTNNA1-232ENST00000522013 C11orf24Q96F05 449 aaPredicted RBP4.39□□□□□ -1.71
CTNNA1-232ENST00000522013 C20orf173Q96LM9 149 aa4.39□□□□□ -1.71
CTNNA1-232ENST00000522013 ZIM3Q96PE6 472 aa4.39□□□□□ -1.71
CTNNA1-232ENST00000522013 CCT8L2Q96SF2 557 aa4.39□□□□□ -1.71
CTNNA1-232ENST00000522013 HAUS8Q9BT25 410 aa4.39□□□□□ -1.71
CTNNA1-232ENST00000522013 KRTAP4-9Q9BYQ8 210 aa4.39□□□□□ -1.71
CTNNA1-232ENST00000522013 ACTR6Q9GZN1 396 aa4.39□□□□□ -1.71
CTNNA1-232ENST00000522013 PROK2Q9HC23 129 aa4.39□□□□□ -1.71
CTNNA1-232ENST00000522013 TMEM184CQ9NVA4 438 aa4.39□□□□□ -1.71
CTNNA1-232ENST00000522013 CISD1Q9NZ45 108 aaKnown RBP4.39□□□□□ -1.71
CTNNA1-232ENST00000522013 CNIH4Q9P003 139 aa4.39□□□□□ -1.71
CTNNA1-232ENST00000522013 UPB1Q9UBR1 384 aa4.39□□□□□ -1.71
CTNNA1-232ENST00000522013 COPS7AQ9UBW8 275 aa4.39□□□□□ -1.71
CTNNA1-232ENST00000522013 EMCNQ9ULC0 261 aa4.39□□□□□ -1.71
CTNNA1-232ENST00000522013 PCDHGB4Q9UN71 923 aa4.39□□□□□ -1.71
CTNNA1-232ENST00000522013 SLC22A14Q9Y267 594 aa4.39□□□□□ -1.71
CTNNA1-232ENST00000522013 PCNX3Q9H6A9 2034 aa4.39□□□□□ -1.71
CTNNA1-232ENST00000522013 PLXNB1O43157 2135 aa4.39□□□□□ -1.71
CTNNA1-232ENST00000522013 KCNE1BA0A087WTH5 132 aa4.38□□□□□ -1.71
CTNNA1-232ENST00000522013 SLC22A20A6NK97 555 aa4.38□□□□□ -1.71
CTNNA1-232ENST00000522013 A8MT66 165 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms