RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 ALX3O95076 343 aa15.08■□□□□ 0
USP42-207ENST00000521713 PDGFAP04085 211 aa15.08■□□□□ 0
USP42-207ENST00000521713 TMEM196Q5HYL7 178 aa15.08■□□□□ 0
USP42-207ENST00000521713 TPRA1Q86W33 373 aa15.08■□□□□ 0
USP42-207ENST00000521713 ESX1Q8N693 406 aa15.08■□□□□ 0
USP42-207ENST00000521713 OR56B4Q8NH76 319 aa15.08■□□□□ 0
USP42-207ENST00000521713 BPIFA2Q96DR5 249 aa15.08■□□□□ 0
USP42-207ENST00000521713 GIMAP5Q96F15 307 aa15.08■□□□□ 0
USP42-207ENST00000521713 INPP5EQ9NRR6 644 aa15.08■□□□□ 0
USP42-207ENST00000521713 ZNF443Q9Y2A4 671 aaPredicted RBP15.08■□□□□ 0
USP42-207ENST00000521713 NME7Q9Y5B8 376 aa15.08■□□□□ 0
USP42-207ENST00000521713 EVPLQ92817 2033 aa15.08■□□□□ 0
USP42-207ENST00000521713 A0A1B0GX78 115 aa15.07■□□□□ 0
USP42-207ENST00000521713 C7orf72A4D263 438 aa15.07■□□□□ 0
USP42-207ENST00000521713 SEC14L2O76054 403 aa15.07■□□□□ 0
USP42-207ENST00000521713 ZNF35P13682 527 aa15.07■□□□□ 0
USP42-207ENST00000521713 CSNK1A1P48729 337 aa15.07■□□□□ 0
USP42-207ENST00000521713 MECP2P51608 486 aaKnown RBP15.07■□□□□ 0
USP42-207ENST00000521713 OR1D5P58170 312 aa15.07■□□□□ 0
USP42-207ENST00000521713 ECH1Q13011 328 aa15.07■□□□□ 0
USP42-207ENST00000521713 ABHD17CQ6PCB6 329 aa15.07■□□□□ 0
USP42-207ENST00000521713 CBLL1Q75N03 491 aa15.07■□□□□ 0
USP42-207ENST00000521713 DNAJC22Q8N4W6 341 aa15.07■□□□□ 0
USP42-207ENST00000521713 ZNF740Q8NDX6 193 aa15.07■□□□□ 0
USP42-207ENST00000521713 PRDM9Q9NQV7 894 aa15.07■□□□□ 0
USP42-207ENST00000521713 OLAHQ9NV23 265 aa15.07■□□□□ 0
USP42-207ENST00000521713 RBFOX1Q9NWB1 397 aaKnown RBP15.07■□□□□ 0
USP42-207ENST00000521713 VNN3Q9NY84 501 aa15.07■□□□□ 0
USP42-207ENST00000521713 CNIH4Q9P003 139 aa15.07■□□□□ 0
USP42-207ENST00000521713 HIF3AQ9Y2N7 669 aa15.07■□□□□ 0
USP42-207ENST00000521713 A0A0D9SG52 128 aa15.07■□□□□ 0
USP42-207ENST00000521713 SLC43A1O75387 559 aa15.07■□□□□ 0
USP42-207ENST00000521713 CD3GP09693 182 aa15.07■□□□□ 0
USP42-207ENST00000521713 CCNJQ5T5M9 372 aa15.07■□□□□ 0
USP42-207ENST00000521713 C5orf46Q6UWT4 87 aa15.07■□□□□ 0
USP42-207ENST00000521713 RFPL4BQ6ZWI9 263 aa15.07■□□□□ 0
USP42-207ENST00000521713 ISL2Q96A47 359 aa15.07■□□□□ 0
USP42-207ENST00000521713 PCED1AQ9H1Q7 454 aa15.07■□□□□ 0
USP42-207ENST00000521713 RANGRFQ9HD47 186 aaPredicted RBP15.07■□□□□ 0
USP42-207ENST00000521713 RREB1Q92766 1687 aa15.07■□□□□ 0
USP42-207ENST00000521713 ZNF264O43296 627 aa15.07■□□□□ 0
USP42-207ENST00000521713 B4GALT3O60512 393 aa15.07■□□□□ 0
USP42-207ENST00000521713 PPP3CBP16298 524 aa15.07■□□□□ 0
USP42-207ENST00000521713 BTN1A1Q13410 526 aa15.07■□□□□ 0
USP42-207ENST00000521713 NKAIN2Q5VXU1 208 aa15.07■□□□□ 0
USP42-207ENST00000521713 GPR139Q6DWJ6 353 aa15.07■□□□□ 0
USP42-207ENST00000521713 MMP21Q8N119 569 aa15.07■□□□□ 0
USP42-207ENST00000521713 ZFP41Q8N8Y5 198 aa15.07■□□□□ 0
USP42-207ENST00000521713 RPS10P5Q9NQ39 176 aa15.07■□□□□ 0
USP42-207ENST00000521713 hCG_1807616A0A1W2PRN6 198 aa15.07■□□□□ 0
USP42-207ENST00000521713 PLRG1O43660 514 aaKnown RBP15.07■□□□□ 0
USP42-207ENST00000521713 AKAIN1P0CW23 69 aa15.07■□□□□ 0
USP42-207ENST00000521713 ALDH3B1P43353 468 aa15.07■□□□□ 0
USP42-207ENST00000521713 NRARPQ7Z6K4 114 aa15.07■□□□□ 0
USP42-207ENST00000521713 LILRA3Q8N6C8 439 aaPredicted RBP15.07■□□□□ 0
USP42-207ENST00000521713 OR13C3Q8NGS6 347 aa15.07■□□□□ 0
USP42-207ENST00000521713 SSX3Q99909 188 aa15.07■□□□□ 0
USP42-207ENST00000521713 TMEM121BQ9BXQ6 578 aaPredicted RBP15.07■□□□□ 0
USP42-207ENST00000521713 THSD1Q9NS62 852 aa15.07■□□□□ 0
USP42-207ENST00000521713 TBC1D29Q9UFV1 150 aa15.07■□□□□ 0
USP42-207ENST00000521713 IER3IP1Q9Y5U9 82 aa15.07■□□□□ 0
USP42-207ENST00000521713 BCORQ6W2J9 1755 aa15.07■□□□□ 0
USP42-207ENST00000521713 HOXB9P17482 250 aaPredicted RBP15.06■□□□□ 0
USP42-207ENST00000521713 GRPRP30550 384 aa15.06■□□□□ 0
USP42-207ENST00000521713 HMGN3Q15651 99 aa15.06■□□□□ 0
USP42-207ENST00000521713 PCGF3Q3KNV8 242 aa15.06■□□□□ 0
USP42-207ENST00000521713 OR9Q2Q8NGE9 314 aa15.06■□□□□ 0
USP42-207ENST00000521713 BRIX1Q8TDN6 353 aaKnown RBP15.06■□□□□ 0
USP42-207ENST00000521713 ATP13A2Q9NQ11 1180 aa15.06■□□□□ 0
USP42-207ENST00000521713 HEMK1Q9Y5R4 338 aaPredicted RBP15.06■□□□□ 0
USP42-207ENST00000521713 CAPNS1P04632 268 aa15.06■□□□□ 0
USP42-207ENST00000521713 RRAS2P62070 204 aaPredicted RBP15.06■□□□□ 0
USP42-207ENST00000521713 SYPL1Q16563 259 aa15.06■□□□□ 0
USP42-207ENST00000521713 FAM83HQ6ZRV2 1179 aaPredicted RBP15.06■□□□□ 0
USP42-207ENST00000521713 CLDN22Q8N7P3 220 aa15.06■□□□□ 0
USP42-207ENST00000521713 SYT3Q9BQG1 590 aa15.06■□□□□ 0
USP42-207ENST00000521713 WDR83Q9BRX9 315 aaKnown RBP15.06■□□□□ 0
USP42-207ENST00000521713 OR10A5Q9H207 317 aa15.06■□□□□ 0
USP42-207ENST00000521713 WASH6PQ9NQA3 447 aa15.06■□□□□ 0
USP42-207ENST00000521713 GFOD1Q9NXC2 390 aa15.06■□□□□ 0
USP42-207ENST00000521713 ZNF337Q9Y3M9 751 aa15.06■□□□□ 0
USP42-207ENST00000521713 PLEKHM1Q9Y4G2 1056 aa15.06■□□□□ 0
USP42-207ENST00000521713 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.06■□□□□ 0
USP42-207ENST00000521713 K7ESM1 405 aa15.06■□□□□ 0
USP42-207ENST00000521713 B4GAT1O43505 415 aa15.06■□□□□ 0
USP42-207ENST00000521713 PFN3P60673 137 aa15.06■□□□□ 0
USP42-207ENST00000521713 SSX2Q16385 188 aa15.06■□□□□ 0
USP42-207ENST00000521713 ZNF791Q3KP31 576 aaPredicted RBP15.06■□□□□ 0
USP42-207ENST00000521713 SYT13Q7L8C5 426 aa15.06■□□□□ 0
USP42-207ENST00000521713 CPOQ8IVL8 374 aa15.06■□□□□ 0
USP42-207ENST00000521713 LCORQ96JN0 433 aaPredicted RBP15.06■□□□□ 0
USP42-207ENST00000521713 LOC105369274A0A096LPK9 316 aa15.06■□□□□ 0
USP42-207ENST00000521713 CDC14CA4D256 554 aa15.06■□□□□ 0
USP42-207ENST00000521713 ARPC1BO15143 372 aaKnown RBP15.06■□□□□ 0
USP42-207ENST00000521713 FURINP09958 794 aa15.06■□□□□ 0
USP42-207ENST00000521713 ABOP16442 354 aa15.06■□□□□ 0
USP42-207ENST00000521713 ZNF26P17031 533 aaPredicted RBP15.06■□□□□ 0
USP42-207ENST00000521713 TACR1P25103 407 aa15.06■□□□□ 0
USP42-207ENST00000521713 PTGER1P34995 402 aa15.06■□□□□ 0
USP42-207ENST00000521713 CD79BP40259 229 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms