RNA–Protein interactions for RNA: ENST00000521331.5

PRKDC-204, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-204ENST00000521331 TMEM181Q9P2C4 612 aa13.06□□□□□ -0.32
PRKDC-204ENST00000521331 UPB1Q9UBR1 384 aa13.06□□□□□ -0.32
PRKDC-204ENST00000521331 ZDHHC2Q9UIJ5 367 aa13.06□□□□□ -0.32
PRKDC-204ENST00000521331 TRAPPC4Q9Y296 219 aa13.06□□□□□ -0.32
PRKDC-204ENST00000521331 SLC9A8Q9Y2E8 581 aa13.06□□□□□ -0.32
PRKDC-204ENST00000521331 OR12D1P0DN82 309 aa13.05□□□□□ -0.32
PRKDC-204ENST00000521331 ZNF16P17020 682 aaPredicted RBP13.05□□□□□ -0.32
PRKDC-204ENST00000521331 GZMKP49863 264 aa13.05□□□□□ -0.32
PRKDC-204ENST00000521331 PHC1P78364 1004 aa13.05□□□□□ -0.32
PRKDC-204ENST00000521331 LSM11P83369 360 aaKnown RBP eCLIP13.05□□□□□ -0.32
PRKDC-204ENST00000521331 H3F3AP84243 136 aa13.05□□□□□ -0.32
PRKDC-204ENST00000521331 SMU1Q2TAY7 513 aa13.05□□□□□ -0.32
PRKDC-204ENST00000521331 OR4F3Q6IEY1 312 aa13.05□□□□□ -0.32
PRKDC-204ENST00000521331 TYW3Q6IPR3 259 aaKnown RBP13.05□□□□□ -0.32
PRKDC-204ENST00000521331 EMBQ6PCB8 327 aa13.05□□□□□ -0.32
PRKDC-204ENST00000521331 OLIG3Q7RTU3 272 aa13.05□□□□□ -0.32
PRKDC-204ENST00000521331 ADGRG3Q86Y34 549 aa13.05□□□□□ -0.32
PRKDC-204ENST00000521331 CCDC103Q8IW40 242 aa13.05□□□□□ -0.32
PRKDC-204ENST00000521331 CLEC4FQ8N1N0 589 aa13.05□□□□□ -0.32
PRKDC-204ENST00000521331 RIBC1Q8N443 379 aaPredicted RBP13.05□□□□□ -0.32
PRKDC-204ENST00000521331 ARFGAP2Q8N6H7 521 aa13.05□□□□□ -0.32
PRKDC-204ENST00000521331 WDR31Q8NA23 367 aa13.05□□□□□ -0.32
PRKDC-204ENST00000521331 OR8J2Q8NGG1 315 aa13.05□□□□□ -0.32
PRKDC-204ENST00000521331 OR52E4Q8NGH9 312 aa13.05□□□□□ -0.32
PRKDC-204ENST00000521331 XAGE5Q8WWM1 108 aa13.05□□□□□ -0.32
PRKDC-204ENST00000521331 DDIT4LQ96D03 193 aa13.05□□□□□ -0.32
PRKDC-204ENST00000521331 ZIM3Q96PE6 472 aa13.05□□□□□ -0.32
PRKDC-204ENST00000521331 NAA11Q9BSU3 229 aaPredicted RBP13.05□□□□□ -0.32
PRKDC-204ENST00000521331 C1QTNF6Q9BXI9 259 aa13.05□□□□□ -0.32
PRKDC-204ENST00000521331 OR11A1Q9GZK7 315 aa13.05□□□□□ -0.32
PRKDC-204ENST00000521331 SAP130Q9H0E3 1048 aa13.05□□□□□ -0.32
PRKDC-204ENST00000521331 SLC17A5Q9NRA2 495 aa13.05□□□□□ -0.32
PRKDC-204ENST00000521331 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.05□□□□□ -0.32
PRKDC-204ENST00000521331 SLC17A7Q9P2U7 560 aa13.05□□□□□ -0.32
PRKDC-204ENST00000521331 TLDC2A0PJX2 215 aa13.04□□□□□ -0.32
PRKDC-204ENST00000521331 ZNF208O43345 1280 aa13.04□□□□□ -0.32
PRKDC-204ENST00000521331 LMX1BO60663 402 aa13.04□□□□□ -0.32
PRKDC-204ENST00000521331 BCAS1O75363 584 aaPredicted RBP13.04□□□□□ -0.32
PRKDC-204ENST00000521331 UQCRC2P22695 453 aa13.04□□□□□ -0.32
PRKDC-204ENST00000521331 ARRB2P32121 409 aa13.04□□□□□ -0.32
PRKDC-204ENST00000521331 MAP2K6P52564 334 aa13.04□□□□□ -0.32
PRKDC-204ENST00000521331 FOXG1P55316 489 aaPredicted RBP13.04□□□□□ -0.32
PRKDC-204ENST00000521331 SLC35A1P78382 337 aa13.04□□□□□ -0.32
PRKDC-204ENST00000521331 KCNJ10P78508 379 aa13.04□□□□□ -0.32
PRKDC-204ENST00000521331 HPCAP84074 193 aa13.04□□□□□ -0.32
PRKDC-204ENST00000521331 ANXA8L1Q5VT79 327 aa13.04□□□□□ -0.32
PRKDC-204ENST00000521331 FRRS1Q6ZNA5 592 aa13.04□□□□□ -0.32
PRKDC-204ENST00000521331 VPS37AQ8NEZ2 397 aa13.04□□□□□ -0.32
PRKDC-204ENST00000521331 PMM1Q92871 262 aa13.04□□□□□ -0.32
PRKDC-204ENST00000521331 ROPN1LQ96C74 230 aa13.04□□□□□ -0.32
PRKDC-204ENST00000521331 DNAJA3Q96EY1 480 aa13.04□□□□□ -0.32
PRKDC-204ENST00000521331 KCNS2Q9ULS6 477 aa13.04□□□□□ -0.32
PRKDC-204ENST00000521331 FLVCR1Q9Y5Y0 555 aa13.04□□□□□ -0.32
PRKDC-204ENST00000521331 FKBP7Q9Y680 259 aa13.04□□□□□ -0.32
PRKDC-204ENST00000521331 SVEP1Q4LDE5 3571 aa13.04□□□□□ -0.32
PRKDC-204ENST00000521331 PRSS51A0A1B0GVH4 220 aa13.03□□□□□ -0.32
PRKDC-204ENST00000521331 NDUFS8O00217 210 aa13.03□□□□□ -0.32
PRKDC-204ENST00000521331 WNT11O96014 354 aa13.03□□□□□ -0.32
PRKDC-204ENST00000521331 NUDT17P0C025 328 aa13.03□□□□□ -0.32
PRKDC-204ENST00000521331 SRD5A1P18405 259 aa13.03□□□□□ -0.32
PRKDC-204ENST00000521331 MPGP29372 298 aa13.03□□□□□ -0.32
PRKDC-204ENST00000521331 IDH2P48735 452 aaKnown RBP13.03□□□□□ -0.32
PRKDC-204ENST00000521331 KHKP50053 298 aa13.03□□□□□ -0.32
PRKDC-204ENST00000521331 PDLIM4P50479 330 aa13.03□□□□□ -0.32
PRKDC-204ENST00000521331 POLR2HP52434 150 aaKnown RBP13.03□□□□□ -0.32
PRKDC-204ENST00000521331 PRPS1P60891 318 aa13.03□□□□□ -0.32
PRKDC-204ENST00000521331 SLC17A1Q14916 467 aa13.03□□□□□ -0.32
PRKDC-204ENST00000521331 KRTAP24-1Q3LI83 254 aa13.03□□□□□ -0.32
PRKDC-204ENST00000521331 C9orf135Q5VTT2 229 aa13.03□□□□□ -0.32
PRKDC-204ENST00000521331 SAXO2Q658L1 398 aa13.03□□□□□ -0.32
PRKDC-204ENST00000521331 FAM166AQ6J272 317 aa13.03□□□□□ -0.32
PRKDC-204ENST00000521331 TNFAIP8L2Q6P589 184 aaPredicted RBP13.03□□□□□ -0.32
PRKDC-204ENST00000521331 KLHL24Q6TFL4 600 aa13.03□□□□□ -0.32
PRKDC-204ENST00000521331 CMIPQ8IY22 773 aa13.03□□□□□ -0.32
PRKDC-204ENST00000521331 TCP10LQ8TDR4 215 aa13.03□□□□□ -0.32
PRKDC-204ENST00000521331 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.03□□□□□ -0.32
PRKDC-204ENST00000521331 PIMREGQ9BSJ6 248 aa13.03□□□□□ -0.32
PRKDC-204ENST00000521331 SLC7A10Q9NS82 523 aa13.03□□□□□ -0.32
PRKDC-204ENST00000521331 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.03□□□□□ -0.327e-9■■■■■ 34.3
PRKDC-204ENST00000521331 NUP214P35658 2090 aaPredicted RBP13.03□□□□□ -0.32
PRKDC-204ENST00000521331 TMED7-TICAM2A0A0A6YYA0 188 aa13.02□□□□□ -0.33
PRKDC-204ENST00000521331 SCN2BO60939 215 aa13.02□□□□□ -0.33
PRKDC-204ENST00000521331 SPAG7O75391 227 aa13.02□□□□□ -0.33
PRKDC-204ENST00000521331 CCNA2P20248 432 aa13.02□□□□□ -0.33
PRKDC-204ENST00000521331 SLC25A3Q00325 362 aa13.02□□□□□ -0.33
PRKDC-204ENST00000521331 FUT5Q11128 374 aa13.02□□□□□ -0.33
PRKDC-204ENST00000521331 SWI5Q1ZZU3 235 aa13.02□□□□□ -0.33
PRKDC-204ENST00000521331 GPAT3Q53EU6 434 aa13.02□□□□□ -0.33
PRKDC-204ENST00000521331 TSPO2Q5TGU0 170 aa13.02□□□□□ -0.33
PRKDC-204ENST00000521331 PAQR6Q6TCH4 344 aa13.02□□□□□ -0.33
PRKDC-204ENST00000521331 ABHD12BQ7Z5M8 362 aaPredicted RBP13.02□□□□□ -0.33
PRKDC-204ENST00000521331 RAB8BQ92930 207 aa13.02□□□□□ -0.33
PRKDC-204ENST00000521331 TMEM45BQ96B21 275 aa13.02□□□□□ -0.33
PRKDC-204ENST00000521331 ZG16BQ96DA0 208 aa13.02□□□□□ -0.33
PRKDC-204ENST00000521331 NEURL3Q96EH8 262 aa13.02□□□□□ -0.33
PRKDC-204ENST00000521331 DPY30Q9C005 99 aa13.02□□□□□ -0.33
PRKDC-204ENST00000521331 MYOZ1Q9NP98 299 aaPredicted RBP13.02□□□□□ -0.33
PRKDC-204ENST00000521331 OBP2BQ9NPH6 170 aa13.02□□□□□ -0.33
PRKDC-204ENST00000521331 OSGIN1Q9UJX0 560 aa13.02□□□□□ -0.33
PRKDC-204ENST00000521331 TMED7Q9Y3B3 224 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms