RNA–Protein interactions for RNA: ENST00000521216.5

SKP1-208, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SKP1, Length 899 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-208ENST00000521216 SH3GL3Q99963 347 aa3.42□□□□□ -1.86
SKP1-208ENST00000521216 OMDQ99983 421 aa3.42□□□□□ -1.86
SKP1-208ENST00000521216 ALG12Q9BV10 488 aa3.42□□□□□ -1.86
SKP1-208ENST00000521216 QPCTLQ9NXS2 382 aa3.42□□□□□ -1.86
SKP1-208ENST00000521216 HOXC10Q9NYD6 342 aa3.42□□□□□ -1.86
SKP1-208ENST00000521216 SIGLEC8Q9NYZ4 499 aa3.42□□□□□ -1.86
SKP1-208ENST00000521216 IL36GQ9NZH8 169 aa3.42□□□□□ -1.86
SKP1-208ENST00000521216 TBK1Q9UHD2 729 aa3.42□□□□□ -1.86
SKP1-208ENST00000521216 SH3BGRL2Q9UJC5 107 aa3.42□□□□□ -1.86
SKP1-208ENST00000521216 TRAF3IP3Q9Y228 551 aa3.42□□□□□ -1.86
SKP1-208ENST00000521216 AK6Q9Y3D8 172 aaKnown RBP3.42□□□□□ -1.86
SKP1-208ENST00000521216 IKBKGQ9Y6K9 419 aa3.42□□□□□ -1.86
SKP1-208ENST00000521216 KDRP35968 1356 aa3.41□□□□□ -1.86
SKP1-208ENST00000521216 UQCRHLA0A096LP55 91 aa3.41□□□□□ -1.86
SKP1-208ENST00000521216 TRIM64CA6NLI5 447 aa3.41□□□□□ -1.86
SKP1-208ENST00000521216 ZNF780AO75290 641 aaPredicted RBP3.41□□□□□ -1.86
SKP1-208ENST00000521216 KIAA0754O94854 1291 aa3.41□□□□□ -1.86
SKP1-208ENST00000521216 P04436 131 aa3.41□□□□□ -1.86
SKP1-208ENST00000521216 UQCRHP07919 91 aa3.41□□□□□ -1.86
SKP1-208ENST00000521216 ZNF17P17021 662 aa3.41□□□□□ -1.86
SKP1-208ENST00000521216 MDKP21741 143 aaPredicted RBP3.41□□□□□ -1.86
SKP1-208ENST00000521216 CCNE1P24864 410 aa3.41□□□□□ -1.86
SKP1-208ENST00000521216 MSNP26038 577 aaKnown RBP3.41□□□□□ -1.86
SKP1-208ENST00000521216 PSMA5P28066 241 aa3.41□□□□□ -1.86
SKP1-208ENST00000521216 SOX6P35712 828 aa3.41□□□□□ -1.86
SKP1-208ENST00000521216 HSD17B7P56937 341 aa3.41□□□□□ -1.86
SKP1-208ENST00000521216 SELENOTP62341 195 aa3.41□□□□□ -1.86
SKP1-208ENST00000521216 TGFBR3Q03167 851 aa3.41□□□□□ -1.86
SKP1-208ENST00000521216 DAZ2Q13117 558 aaKnown RBP3.41□□□□□ -1.86
SKP1-208ENST00000521216 NSUN5P1Q3KNT7 163 aa3.41□□□□□ -1.86
SKP1-208ENST00000521216 SLC25A52Q3SY17 297 aa3.41□□□□□ -1.86
SKP1-208ENST00000521216 C1orf146Q5VVC0 180 aa3.41□□□□□ -1.86
SKP1-208ENST00000521216 RNF165Q6ZSG1 346 aa3.41□□□□□ -1.86
SKP1-208ENST00000521216 LINC01555Q8NAE3 123 aa3.41□□□□□ -1.86
SKP1-208ENST00000521216 OR4D9Q8NGE8 314 aa3.41□□□□□ -1.86
SKP1-208ENST00000521216 UCN3Q969E3 161 aa3.41□□□□□ -1.86
SKP1-208ENST00000521216 C7orf34Q96L11 122 aa3.41□□□□□ -1.86
SKP1-208ENST00000521216 ZNF285Q96NJ3 590 aa3.41□□□□□ -1.86
SKP1-208ENST00000521216 TBX15Q96SF7 602 aa3.41□□□□□ -1.86
SKP1-208ENST00000521216 POLR1EQ9GZS1 481 aaKnown RBP3.41□□□□□ -1.86
SKP1-208ENST00000521216 PLGRKTQ9HBL7 147 aa3.41□□□□□ -1.86
SKP1-208ENST00000521216 DAZ3Q9NR90 486 aaKnown RBP3.41□□□□□ -1.86
SKP1-208ENST00000521216 NUDT15Q9NV35 164 aa3.41□□□□□ -1.86
SKP1-208ENST00000521216 RNF14Q9UBS8 474 aa3.41□□□□□ -1.86
SKP1-208ENST00000521216 SNX6Q9UNH7 406 aa3.41□□□□□ -1.86
SKP1-208ENST00000521216 SCAPERQ9BY12 1400 aa3.41□□□□□ -1.86
SKP1-208ENST00000521216 GTF3C1Q12789 2109 aa3.4□□□□□ -1.86
SKP1-208ENST00000521216 LRP5LA4QPB2 252 aa3.4□□□□□ -1.87
SKP1-208ENST00000521216 PSMB11A5LHX3 300 aa3.4□□□□□ -1.87
SKP1-208ENST00000521216 FAM25EA8MYX2 175 aa3.4□□□□□ -1.87
SKP1-208ENST00000521216 ERLIN1O75477 346 aa3.4□□□□□ -1.87
SKP1-208ENST00000521216 IGHDP01880 384 aa3.4□□□□□ -1.87
SKP1-208ENST00000521216 HNRNPA2B1P22626 353 aaKnown RBP3.4□□□□□ -1.87
SKP1-208ENST00000521216 RDXP35241 583 aaKnown RBP3.4□□□□□ -1.87
SKP1-208ENST00000521216 PRPHP41219 470 aa3.4□□□□□ -1.87
SKP1-208ENST00000521216 P2RY1P47900 373 aa3.4□□□□□ -1.87
SKP1-208ENST00000521216 CBX1P83916 185 aa3.4□□□□□ -1.87
SKP1-208ENST00000521216 SYCP1Q15431 976 aa3.4□□□□□ -1.87
SKP1-208ENST00000521216 TTC19Q6DKK2 380 aaPredicted RBP3.4□□□□□ -1.87
SKP1-208ENST00000521216 CES3Q6UWW8 571 aa3.4□□□□□ -1.87
SKP1-208ENST00000521216 CCDC65Q8IXS2 484 aa3.4□□□□□ -1.87
SKP1-208ENST00000521216 FTMTQ8N4E7 242 aa3.4□□□□□ -1.87
SKP1-208ENST00000521216 DRAXINQ8NBI3 349 aaPredicted RBP3.4□□□□□ -1.87
SKP1-208ENST00000521216 SUMF2Q8NBJ7 301 aa3.4□□□□□ -1.87
SKP1-208ENST00000521216 OR2T34Q8NGX1 318 aa3.4□□□□□ -1.87
SKP1-208ENST00000521216 NEIL3Q8TAT5 605 aa3.4□□□□□ -1.87
SKP1-208ENST00000521216 CHCHD10Q8WYQ3 142 aaPredicted RBP3.4□□□□□ -1.87
SKP1-208ENST00000521216 FGF11Q92914 225 aa3.4□□□□□ -1.87
SKP1-208ENST00000521216 PELI1Q96FA3 418 aa3.4□□□□□ -1.87
SKP1-208ENST00000521216 MBOAT4Q96T53 435 aa3.4□□□□□ -1.87
SKP1-208ENST00000521216 TSG101Q99816 390 aa3.4□□□□□ -1.87
SKP1-208ENST00000521216 RAB33BQ9H082 229 aa3.4□□□□□ -1.87
SKP1-208ENST00000521216 POPDC2Q9HBU9 364 aa3.4□□□□□ -1.87
SKP1-208ENST00000521216 BLOC1S6Q9UL45 172 aa3.4□□□□□ -1.87
SKP1-208ENST00000521216 RPH3ALQ9UNE2 315 aa3.4□□□□□ -1.87
SKP1-208ENST00000521216 ASF1AQ9Y294 204 aa3.4□□□□□ -1.87
SKP1-208ENST00000521216 CACNG2Q9Y698 323 aa3.4□□□□□ -1.87
SKP1-208ENST00000521216 V9GY05 133 aa3.4□□□□□ -1.87
SKP1-208ENST00000521216 PEG3Q9GZU2 1588 aa3.39□□□□□ -1.87
SKP1-208ENST00000521216 A0A1B0GUA9 196 aa3.39□□□□□ -1.87
SKP1-208ENST00000521216 ERICH4A6NGS2 130 aa3.39□□□□□ -1.87
SKP1-208ENST00000521216 A6NIZ1 184 aa3.39□□□□□ -1.87
SKP1-208ENST00000521216 TRDCB7Z8K6 153 aa3.39□□□□□ -1.87
SKP1-208ENST00000521216 F8VZ95 297 aa3.39□□□□□ -1.87
SKP1-208ENST00000521216 CXCL13O43927 109 aa3.39□□□□□ -1.87
SKP1-208ENST00000521216 TBX19O60806 448 aa3.39□□□□□ -1.87
SKP1-208ENST00000521216 NPIPB7O75200 414 aa3.39□□□□□ -1.87
SKP1-208ENST00000521216 CA11O75493 328 aa3.39□□□□□ -1.87
SKP1-208ENST00000521216 LGI1O95970 557 aa3.39□□□□□ -1.87
SKP1-208ENST00000521216 LGALS2P05162 132 aa3.39□□□□□ -1.87
SKP1-208ENST00000521216 PRG2P13727 222 aa3.39□□□□□ -1.87
SKP1-208ENST00000521216 CTRLP40313 264 aa3.39□□□□□ -1.87
SKP1-208ENST00000521216 HNRNPA3P51991 378 aaKnown RBP3.39□□□□□ -1.87
SKP1-208ENST00000521216 UCNP55089 124 aa3.39□□□□□ -1.87
SKP1-208ENST00000521216 SH3BGRP55822 239 aaPredicted RBP3.39□□□□□ -1.87
SKP1-208ENST00000521216 RAP1BP61224 184 aa3.39□□□□□ -1.87
SKP1-208ENST00000521216 CCDC80Q76M96 950 aa3.39□□□□□ -1.87
SKP1-208ENST00000521216 ZNF571Q7Z3V5 609 aaPredicted RBP3.39□□□□□ -1.87
SKP1-208ENST00000521216 SYT14Q8NB59 555 aa3.39□□□□□ -1.87
SKP1-208ENST00000521216 OR1F12Q8NHA8 337 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms