RNA–Protein interactions for RNA: ENST00000520286.5

LSM1-202, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 1 (best)

Gene LSM1, Length 776 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-202ENST00000520286 CRNKL1Q9BZJ0 848 aaKnown RBP5.91□□□□□ -1.46
LSM1-202ENST00000520286 PRO3102Q9H379 93 aa5.91□□□□□ -1.46
LSM1-202ENST00000520286 LZTFL1Q9NQ48 299 aa5.91□□□□□ -1.46
LSM1-202ENST00000520286 PIPOXQ9P0Z9 390 aa5.91□□□□□ -1.46
LSM1-202ENST00000520286 MYH13Q9UKX3 1938 aa5.91□□□□□ -1.46
LSM1-202ENST00000520286 A0A1W2PNV4 684 aa5.9□□□□□ -1.46
LSM1-202ENST00000520286 OR6C65A6NJZ3 312 aa5.9□□□□□ -1.46
LSM1-202ENST00000520286 F10P00742 488 aa5.9□□□□□ -1.46
LSM1-202ENST00000520286 RPS12P25398 132 aaKnown RBP5.9□□□□□ -1.46
LSM1-202ENST00000520286 PEX6Q13608 980 aa5.9□□□□□ -1.46
LSM1-202ENST00000520286 CRMP1Q14194 572 aa5.9□□□□□ -1.46
LSM1-202ENST00000520286 MESDQ14696 234 aa5.9□□□□□ -1.46
LSM1-202ENST00000520286 RESP18Q5W5W9 173 aa5.9□□□□□ -1.46
LSM1-202ENST00000520286 OR8G2PQ6IF36 304 aa5.9□□□□□ -1.46
LSM1-202ENST00000520286 FAM71F2Q6NXP2 309 aa5.9□□□□□ -1.46
LSM1-202ENST00000520286 FAAP20Q6NZ36 180 aa5.9□□□□□ -1.46
LSM1-202ENST00000520286 CCDC121Q6ZUS5 278 aa5.9□□□□□ -1.46
LSM1-202ENST00000520286 EFL1Q7Z2Z2 1120 aaKnown RBP5.9□□□□□ -1.46
LSM1-202ENST00000520286 IQCKQ8N0W5 287 aa5.9□□□□□ -1.46
LSM1-202ENST00000520286 TMEM123Q8N131 208 aa5.9□□□□□ -1.46
LSM1-202ENST00000520286 PIGCQ92535 297 aa5.9□□□□□ -1.46
LSM1-202ENST00000520286 C7orf34Q96L11 122 aa5.9□□□□□ -1.46
LSM1-202ENST00000520286 C12orf66Q96MD2 445 aa5.9□□□□□ -1.46
LSM1-202ENST00000520286 TGM7Q96PF1 710 aa5.9□□□□□ -1.46
LSM1-202ENST00000520286 ALS2CR12Q96Q35 445 aa5.9□□□□□ -1.46
LSM1-202ENST00000520286 CCT8L2Q96SF2 557 aa5.9□□□□□ -1.46
LSM1-202ENST00000520286 NPAS2Q99743 824 aa5.9□□□□□ -1.46
LSM1-202ENST00000520286 SLC6A7Q99884 636 aa5.9□□□□□ -1.46
LSM1-202ENST00000520286 TMEM43Q9BTV4 400 aa5.9□□□□□ -1.46
LSM1-202ENST00000520286 DUSP16Q9BY84 665 aa5.9□□□□□ -1.46
LSM1-202ENST00000520286 ADNPQ9H2P0 1102 aa5.9□□□□□ -1.46
LSM1-202ENST00000520286 HAUS4Q9H6D7 363 aa5.9□□□□□ -1.46
LSM1-202ENST00000520286 NAALAD2Q9Y3Q0 740 aa5.9□□□□□ -1.46
LSM1-202ENST00000520286 ZNF487B1APH4 448 aa5.89□□□□□ -1.47
LSM1-202ENST00000520286 AP3B1O00203 1094 aa5.89□□□□□ -1.47
LSM1-202ENST00000520286 OR7A17O14581 309 aa5.89□□□□□ -1.47
LSM1-202ENST00000520286 LCMT2O60294 686 aaKnown RBP5.89□□□□□ -1.47
LSM1-202ENST00000520286 MELTFP08582 738 aa5.89□□□□□ -1.47
LSM1-202ENST00000520286 LAP3P28838 519 aa5.89□□□□□ -1.47
LSM1-202ENST00000520286 CDH5P33151 784 aaPredicted RBP5.89□□□□□ -1.47
LSM1-202ENST00000520286 SYKP43405 635 aa5.89□□□□□ -1.47
LSM1-202ENST00000520286 AP3M2P53677 418 aa5.89□□□□□ -1.47
LSM1-202ENST00000520286 RPL8P62917 257 aaKnown RBP5.89□□□□□ -1.47
LSM1-202ENST00000520286 CYP51A1Q16850 503 aa5.89□□□□□ -1.47
LSM1-202ENST00000520286 MEDAGQ5VYS4 303 aa5.89□□□□□ -1.47
LSM1-202ENST00000520286 LEMD1Q68G75 181 aa5.89□□□□□ -1.47
LSM1-202ENST00000520286 Q8N377 158 aa5.89□□□□□ -1.47
LSM1-202ENST00000520286 OR8J1Q8NGP2 316 aa5.89□□□□□ -1.47
LSM1-202ENST00000520286 MAGT1Q9H0U3 335 aa5.89□□□□□ -1.47
LSM1-202ENST00000520286 EXOSC3Q9NQT5 275 aaKnown RBP5.89□□□□□ -1.47
LSM1-202ENST00000520286 UFSP2Q9NUQ7 469 aa5.89□□□□□ -1.47
LSM1-202ENST00000520286 PRODH2Q9UF12 536 aa5.89□□□□□ -1.47
LSM1-202ENST00000520286 SAR1BQ9Y6B6 198 aa5.89□□□□□ -1.47
LSM1-202ENST00000520286 ABCC12Q96J65 1359 aa5.89□□□□□ -1.47
LSM1-202ENST00000520286 ZNF609O15014 1411 aa5.89□□□□□ -1.47
LSM1-202ENST00000520286 MYH7P12883 1935 aa5.88□□□□□ -1.47
LSM1-202ENST00000520286 NPIPA7E9PJI5 369 aa5.88□□□□□ -1.47
LSM1-202ENST00000520286 TRAPPC3O43617 180 aa5.88□□□□□ -1.47
LSM1-202ENST00000520286 B4GALT2O60909 372 aa5.88□□□□□ -1.47
LSM1-202ENST00000520286 GYPCP04921 128 aa5.88□□□□□ -1.47
LSM1-202ENST00000520286 CAPN1P07384 714 aa5.88□□□□□ -1.47
LSM1-202ENST00000520286 ALPIP09923 528 aa5.88□□□□□ -1.47
LSM1-202ENST00000520286 NPIPA8P0DM63 369 aa5.88□□□□□ -1.47
LSM1-202ENST00000520286 PCMT1P22061 227 aa5.88□□□□□ -1.47
LSM1-202ENST00000520286 HMGCLP35914 325 aa5.88□□□□□ -1.47
LSM1-202ENST00000520286 ACVR1BP36896 505 aa5.88□□□□□ -1.47
LSM1-202ENST00000520286 CD151P48509 253 aa5.88□□□□□ -1.47
LSM1-202ENST00000520286 ARHGDIBP52566 201 aa5.88□□□□□ -1.47
LSM1-202ENST00000520286 OTUD4Q01804 1114 aaKnown RBP5.88□□□□□ -1.47
LSM1-202ENST00000520286 PUDPQ08623 228 aa5.88□□□□□ -1.47
LSM1-202ENST00000520286 FGL1Q08830 312 aa5.88□□□□□ -1.47
LSM1-202ENST00000520286 IFT88Q13099 833 aa5.88□□□□□ -1.47
LSM1-202ENST00000520286 ITGB3BPQ13352 177 aaPredicted RBP5.88□□□□□ -1.47
LSM1-202ENST00000520286 PNOCQ13519 176 aa5.88□□□□□ -1.47
LSM1-202ENST00000520286 MXD4Q14582 209 aaPredicted RBP5.88□□□□□ -1.47
LSM1-202ENST00000520286 MICAQ29983 383 aa5.88□□□□□ -1.47
LSM1-202ENST00000520286 Q6ZPB1 254 aaPredicted RBP5.88□□□□□ -1.47
LSM1-202ENST00000520286 TIPARPQ7Z3E1 657 aaKnown RBP5.88□□□□□ -1.47
LSM1-202ENST00000520286 ZNF589Q86UQ0 364 aaPredicted RBP5.88□□□□□ -1.47
LSM1-202ENST00000520286 SLC22A18ASQ8N1D0 253 aa5.88□□□□□ -1.47
LSM1-202ENST00000520286 LINC01561Q8N1V8 128 aa5.88□□□□□ -1.47
LSM1-202ENST00000520286 CSNK1G2-AS1Q8NCQ2 148 aa5.88□□□□□ -1.47
LSM1-202ENST00000520286 TUBGCP3Q96CW5 907 aa5.88□□□□□ -1.47
LSM1-202ENST00000520286 PELI1Q96FA3 418 aa5.88□□□□□ -1.47
LSM1-202ENST00000520286 ATP6V1G3Q96LB4 118 aa5.88□□□□□ -1.47
LSM1-202ENST00000520286 ZIM3Q96PE6 472 aa5.88□□□□□ -1.47
LSM1-202ENST00000520286 MDFICQ9P1T7 246 aa5.88□□□□□ -1.47
LSM1-202ENST00000520286 PCSK1NQ9UHG2 260 aa5.88□□□□□ -1.47
LSM1-202ENST00000520286 NPIPA1Q9UND3 350 aa5.88□□□□□ -1.47
LSM1-202ENST00000520286 MOB4Q9Y3A3 225 aa5.88□□□□□ -1.47
LSM1-202ENST00000520286 ALG6Q9Y672 507 aa5.88□□□□□ -1.47
LSM1-202ENST00000520286 GON4LQ3T8J9 2241 aa5.87□□□□□ -1.47
LSM1-202ENST00000520286 TRAV26-1A0A087WT03 109 aa5.87□□□□□ -1.47
LSM1-202ENST00000520286 ZNF233A6NK53 670 aa5.87□□□□□ -1.47
LSM1-202ENST00000520286 CCDC169A6NNP5 214 aa5.87□□□□□ -1.47
LSM1-202ENST00000520286 LRATO95237 230 aa5.87□□□□□ -1.47
LSM1-202ENST00000520286 RENP00797 406 aa5.87□□□□□ -1.47
LSM1-202ENST00000520286 RNF224P0DH78 156 aa5.87□□□□□ -1.47
LSM1-202ENST00000520286 GRIA1P42261 906 aa5.87□□□□□ -1.47
LSM1-202ENST00000520286 OR1D4P47884 311 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms