RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 OR6Q1Q8NGQ2 317 aa2.66□□□□□ -1.98
HMGB1P41-201ENST00000520234 OR2L2Q8NH16 312 aa2.66□□□□□ -1.98
HMGB1P41-201ENST00000520234 LHFPL5Q8TAF8 219 aa2.66□□□□□ -1.98
HMGB1P41-201ENST00000520234 CDKL2Q92772 493 aa2.66□□□□□ -1.98
HMGB1P41-201ENST00000520234 GGHQ92820 318 aa2.66□□□□□ -1.98
HMGB1P41-201ENST00000520234 TOP1MTQ969P6 601 aa2.66□□□□□ -1.98
HMGB1P41-201ENST00000520234 AP2M1Q96CW1 435 aa2.66□□□□□ -1.98
HMGB1P41-201ENST00000520234 RMND5BQ96G75 393 aaPredicted RBP2.66□□□□□ -1.98
HMGB1P41-201ENST00000520234 TMEM80Q96HE8 168 aa2.66□□□□□ -1.98
HMGB1P41-201ENST00000520234 CEP170P1Q96L14 293 aa2.66□□□□□ -1.98
HMGB1P41-201ENST00000520234 CNBD2Q96M20 576 aa2.66□□□□□ -1.98
HMGB1P41-201ENST00000520234 GUCD1Q96NT3 240 aa2.66□□□□□ -1.98
HMGB1P41-201ENST00000520234 VPS35Q96QK1 796 aa2.66□□□□□ -1.98
HMGB1P41-201ENST00000520234 BCL7BQ9BQE9 202 aa2.66□□□□□ -1.98
HMGB1P41-201ENST00000520234 EBF4Q9BQW3 602 aa2.66□□□□□ -1.98
HMGB1P41-201ENST00000520234 FAM213AQ9BRX8 229 aa2.66□□□□□ -1.98
HMGB1P41-201ENST00000520234 C1orf50Q9BV19 199 aa2.66□□□□□ -1.98
HMGB1P41-201ENST00000520234 CALN1Q9BXU9 219 aa2.66□□□□□ -1.98
HMGB1P41-201ENST00000520234 NFKBIZQ9BYH8 718 aa2.66□□□□□ -1.98
HMGB1P41-201ENST00000520234 OCR1Q9BZK8 76 aa2.66□□□□□ -1.98
HMGB1P41-201ENST00000520234 WWP1Q9H0M0 922 aa2.66□□□□□ -1.98
HMGB1P41-201ENST00000520234 DPEP3Q9H4B8 488 aa2.66□□□□□ -1.98
HMGB1P41-201ENST00000520234 COQ10BQ9H8M1 238 aa2.66□□□□□ -1.98
HMGB1P41-201ENST00000520234 CYP3A43Q9HB55 503 aa2.66□□□□□ -1.98
HMGB1P41-201ENST00000520234 NEK6Q9HC98 313 aa2.66□□□□□ -1.98
HMGB1P41-201ENST00000520234 ACOXLQ9NUZ1 547 aa2.66□□□□□ -1.98
HMGB1P41-201ENST00000520234 MED17Q9NVC6 651 aa2.66□□□□□ -1.98
HMGB1P41-201ENST00000520234 TAS2R7Q9NYW3 318 aa2.66□□□□□ -1.98
HMGB1P41-201ENST00000520234 SPG21Q9NZD8 308 aa2.66□□□□□ -1.98
HMGB1P41-201ENST00000520234 THYN1Q9P016 225 aa2.66□□□□□ -1.98
HMGB1P41-201ENST00000520234 EIF3KQ9UBQ5 218 aaKnown RBP2.66□□□□□ -1.98
HMGB1P41-201ENST00000520234 PCSK1NQ9UHG2 260 aa2.66□□□□□ -1.98
HMGB1P41-201ENST00000520234 BCAP29Q9UHQ4 241 aa2.66□□□□□ -1.98
HMGB1P41-201ENST00000520234 ZNF639Q9UID6 485 aa2.66□□□□□ -1.98
HMGB1P41-201ENST00000520234 TEKT2Q9UIF3 430 aa2.66□□□□□ -1.98
HMGB1P41-201ENST00000520234 ANAPC7Q9UJX3 599 aa2.66□□□□□ -1.98
HMGB1P41-201ENST00000520234 EMCNQ9ULC0 261 aa2.66□□□□□ -1.98
HMGB1P41-201ENST00000520234 PLLPQ9Y342 182 aa2.66□□□□□ -1.98
HMGB1P41-201ENST00000520234 AP4S1Q9Y587 144 aa2.66□□□□□ -1.98
HMGB1P41-201ENST00000520234 ETV7Q9Y603 341 aa2.66□□□□□ -1.98
HMGB1P41-201ENST00000520234 IKBKGQ9Y6K9 419 aa2.66□□□□□ -1.98
HMGB1P41-201ENST00000520234 ANKRD31Q8N7Z5 1873 aa2.66□□□□□ -1.98
HMGB1P41-201ENST00000520234 ZNF646O15015 1829 aaPredicted RBP2.65□□□□□ -1.98
HMGB1P41-201ENST00000520234 MYO18AQ92614 2054 aaKnown RBP2.65□□□□□ -1.98
HMGB1P41-201ENST00000520234 TP53BP1Q12888 1972 aaPredicted RBP2.65□□□□□ -1.98
HMGB1P41-201ENST00000520234 DOCK5Q9H7D0 1870 aa2.65□□□□□ -1.98
HMGB1P41-201ENST00000520234 hCG_1818297A0A087WSY0 165 aa2.65□□□□□ -1.99
HMGB1P41-201ENST00000520234 ATP6AP2A0A1C7CYW4 349 aa2.65□□□□□ -1.99
HMGB1P41-201ENST00000520234 GSTTP1A0A1W2PQM5 241 aa2.65□□□□□ -1.99
HMGB1P41-201ENST00000520234 TMEM129A0AVI4 362 aa2.65□□□□□ -1.99
HMGB1P41-201ENST00000520234 CLRN2A0PK11 232 aa2.65□□□□□ -1.99
HMGB1P41-201ENST00000520234 LRRIQ4A6NIV6 560 aa2.65□□□□□ -1.99
HMGB1P41-201ENST00000520234 SYCE1LA8MT33 242 aa2.65□□□□□ -1.99
HMGB1P41-201ENST00000520234 ANHXE9PGG2 379 aa2.65□□□□□ -1.99
HMGB1P41-201ENST00000520234 F8VP50 259 aa2.65□□□□□ -1.99
HMGB1P41-201ENST00000520234 H0YIG0 161 aa2.65□□□□□ -1.99
HMGB1P41-201ENST00000520234 H7C0C1 242 aa2.65□□□□□ -1.99
HMGB1P41-201ENST00000520234 AP3B1O00203 1094 aa2.65□□□□□ -1.99
HMGB1P41-201ENST00000520234 OGTO15294 1046 aa2.65□□□□□ -1.99
HMGB1P41-201ENST00000520234 MED7O43513 233 aa2.65□□□□□ -1.99
HMGB1P41-201ENST00000520234 KLHL41O60662 606 aa2.65□□□□□ -1.99
HMGB1P41-201ENST00000520234 UGT2B11O75310 529 aa2.65□□□□□ -1.99
HMGB1P41-201ENST00000520234 BCAS1O75363 584 aaPredicted RBP2.65□□□□□ -1.99
HMGB1P41-201ENST00000520234 SEMA3DO95025 777 aa2.65□□□□□ -1.99
HMGB1P41-201ENST00000520234 SNX4O95219 450 aa2.65□□□□□ -1.99
HMGB1P41-201ENST00000520234 STAMBPO95630 424 aa2.65□□□□□ -1.99
HMGB1P41-201ENST00000520234 KRT75O95678 551 aa2.65□□□□□ -1.99
HMGB1P41-201ENST00000520234 BPGMP07738 259 aa2.65□□□□□ -1.99
HMGB1P41-201ENST00000520234 TRAPPC2P0DI81 140 aa2.65□□□□□ -1.99
HMGB1P41-201ENST00000520234 TRAPPC2BP0DI82 140 aa2.65□□□□□ -1.99
HMGB1P41-201ENST00000520234 UROSP10746 265 aa2.65□□□□□ -1.99
HMGB1P41-201ENST00000520234 MBL2P11226 248 aaPredicted RBP2.65□□□□□ -1.99
HMGB1P41-201ENST00000520234 COX4I1P13073 169 aa2.65□□□□□ -1.99
HMGB1P41-201ENST00000520234 SPNP16150 400 aa2.65□□□□□ -1.99
HMGB1P41-201ENST00000520234 TNNI1P19237 187 aa2.65□□□□□ -1.99
HMGB1P41-201ENST00000520234 CCNA2P20248 432 aa2.65□□□□□ -1.99
HMGB1P41-201ENST00000520234 CYP3A5P20815 502 aa2.65□□□□□ -1.99
HMGB1P41-201ENST00000520234 IMPDH1P20839 514 aa2.65□□□□□ -1.99
HMGB1P41-201ENST00000520234 KDELR1P24390 212 aa2.65□□□□□ -1.99
HMGB1P41-201ENST00000520234 AXLP30530 894 aa2.65□□□□□ -1.99
HMGB1P41-201ENST00000520234 RRM2P31350 389 aa2.65□□□□□ -1.99
HMGB1P41-201ENST00000520234 UGT2B10P36537 528 aa2.65□□□□□ -1.99
HMGB1P41-201ENST00000520234 TALDO1P37837 337 aa2.65□□□□□ -1.99
HMGB1P41-201ENST00000520234 DDOSTP39656 456 aa2.65□□□□□ -1.99
HMGB1P41-201ENST00000520234 CBX5P45973 191 aa2.65□□□□□ -1.99
HMGB1P41-201ENST00000520234 RPL34P49207 117 aaKnown RBP2.65□□□□□ -1.99
HMGB1P41-201ENST00000520234 FHITP49789 147 aa2.65□□□□□ -1.99
HMGB1P41-201ENST00000520234 CSRP3P50461 194 aa2.65□□□□□ -1.99
HMGB1P41-201ENST00000520234 ERFP50548 548 aa2.65□□□□□ -1.99
HMGB1P41-201ENST00000520234 NKX2-5P52952 324 aaPredicted RBP2.65□□□□□ -1.99
HMGB1P41-201ENST00000520234 AQP5P55064 265 aa2.65□□□□□ -1.99
HMGB1P41-201ENST00000520234 NDUFV3P56181 108 aaKnown RBP2.65□□□□□ -1.99
HMGB1P41-201ENST00000520234 EIF3EP60228 445 aaKnown RBP2.65□□□□□ -1.99
HMGB1P41-201ENST00000520234 DSTNP60981 165 aa2.65□□□□□ -1.99
HMGB1P41-201ENST00000520234 LMO4P61968 165 aa2.65□□□□□ -1.99
HMGB1P41-201ENST00000520234 SLC25A11Q02978 314 aaKnown RBP2.65□□□□□ -1.99
HMGB1P41-201ENST00000520234 MFGE8Q08431 387 aaPredicted RBP2.65□□□□□ -1.99
HMGB1P41-201ENST00000520234 RBBP4Q09028 425 aa2.65□□□□□ -1.99
HMGB1P41-201ENST00000520234 INCA1Q0VD86 236 aa2.65□□□□□ -1.99
HMGB1P41-201ENST00000520234 DPYSL3Q14195 570 aa2.65□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms