RNA–Protein interactions for RNA: ENST00000519120.1

MRPS28-204, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 2

Gene MRPS28, Length 403 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-204ENST00000519120 C9JVG2 144 aa13.93□□□□□ -0.18
MRPS28-204ENST00000519120 AP3D1O14617 1153 aa13.93□□□□□ -0.18
MRPS28-204ENST00000519120 CLOCKO15516 846 aa13.93□□□□□ -0.18
MRPS28-204ENST00000519120 GSNP06396 782 aa13.93□□□□□ -0.18
MRPS28-204ENST00000519120 ATP5J2P56134 94 aa13.93□□□□□ -0.18
MRPS28-204ENST00000519120 SLC35A1P78382 337 aa13.93□□□□□ -0.18
MRPS28-204ENST00000519120 COX20Q5RI15 118 aa13.93□□□□□ -0.18
MRPS28-204ENST00000519120 MRPL2Q5T653 305 aaKnown RBP13.93□□□□□ -0.18
MRPS28-204ENST00000519120 ALKBH2Q6NS38 261 aa13.93□□□□□ -0.18
MRPS28-204ENST00000519120 SMAP2Q8WU79 429 aaPredicted RBP13.93□□□□□ -0.18
MRPS28-204ENST00000519120 ZNF775Q96BV0 537 aaPredicted RBP13.93□□□□□ -0.18
MRPS28-204ENST00000519120 TLCD1Q96CP7 247 aa13.93□□□□□ -0.18
MRPS28-204ENST00000519120 TRMT61AQ96FX7 289 aaKnown RBP13.93□□□□□ -0.18
MRPS28-204ENST00000519120 TRIM2Q9C040 744 aa13.93□□□□□ -0.18
MRPS28-204ENST00000519120 OR11A1Q9GZK7 315 aa13.93□□□□□ -0.18
MRPS28-204ENST00000519120 ADAM19Q9H013 955 aa13.93□□□□□ -0.18
MRPS28-204ENST00000519120 RMND5AQ9H871 391 aa13.93□□□□□ -0.18
MRPS28-204ENST00000519120 MANSC1Q9H8J5 431 aa13.93□□□□□ -0.18
MRPS28-204ENST00000519120 TAS2R16Q9NYV7 291 aa13.93□□□□□ -0.18
MRPS28-204ENST00000519120 TMED7Q9Y3B3 224 aa13.93□□□□□ -0.18
MRPS28-204ENST00000519120 FREM1Q5H8C1 2179 aa13.92□□□□□ -0.18
MRPS28-204ENST00000519120 CDHR4A6H8M9 788 aa13.92□□□□□ -0.18
MRPS28-204ENST00000519120 MRPL33O75394 65 aaKnown RBP13.92□□□□□ -0.18
MRPS28-204ENST00000519120 ERLIN1O75477 346 aa13.92□□□□□ -0.18
MRPS28-204ENST00000519120 THBS1P07996 1170 aa13.92□□□□□ -0.18
MRPS28-204ENST00000519120 KITP10721 976 aa13.92□□□□□ -0.18
MRPS28-204ENST00000519120 TACR3P29371 465 aa13.92□□□□□ -0.18
MRPS28-204ENST00000519120 CRISP3P54108 245 aa13.92□□□□□ -0.18
MRPS28-204ENST00000519120 OR2B6P58173 313 aa13.92□□□□□ -0.18
MRPS28-204ENST00000519120 MAGOHP61326 146 aaKnown RBP13.92□□□□□ -0.18
MRPS28-204ENST00000519120 EPS8Q12929 822 aa13.92□□□□□ -0.18
MRPS28-204ENST00000519120 MAPK11Q15759 364 aa13.92□□□□□ -0.18
MRPS28-204ENST00000519120 STK11Q15831 433 aa13.92□□□□□ -0.18
MRPS28-204ENST00000519120 LIN52Q52LA3 116 aa13.92□□□□□ -0.18
MRPS28-204ENST00000519120 NXNQ6DKJ4 435 aa13.92□□□□□ -0.18
MRPS28-204ENST00000519120 OR7E24Q6IFN5 339 aa13.92□□□□□ -0.18
MRPS28-204ENST00000519120 PAQR6Q6TCH4 344 aa13.92□□□□□ -0.18
MRPS28-204ENST00000519120 Q71RC1 249 aaPredicted RBP13.92□□□□□ -0.18
MRPS28-204ENST00000519120 HMGN2P46Q86SG4 172 aa13.92□□□□□ -0.18
MRPS28-204ENST00000519120 PNPT1Q8TCS8 783 aaKnown RBP13.92□□□□□ -0.18
MRPS28-204ENST00000519120 MGARPQ8TDB4 240 aa13.92□□□□□ -0.18
MRPS28-204ENST00000519120 ITCHQ96J02 903 aa13.92□□□□□ -0.18
MRPS28-204ENST00000519120 NAA11Q9BSU3 229 aaPredicted RBP13.92□□□□□ -0.18
MRPS28-204ENST00000519120 PIF1Q9H611 641 aa13.92□□□□□ -0.18
MRPS28-204ENST00000519120 PARPBPQ9NWS1 579 aa13.92□□□□□ -0.18
MRPS28-204ENST00000519120 ASB6Q9NWX5 421 aa13.92□□□□□ -0.18
MRPS28-204ENST00000519120 SLC9A8Q9Y2E8 581 aa13.92□□□□□ -0.18
MRPS28-204ENST00000519120 ROS1P08922 2347 aa13.92□□□□□ -0.18
MRPS28-204ENST00000519120 ABCA2Q9BZC7 2435 aa13.91□□□□□ -0.18
MRPS28-204ENST00000519120 A0A1W2PP18 115 aa13.91□□□□□ -0.18
MRPS28-204ENST00000519120 SOD3P08294 240 aa13.91□□□□□ -0.18
MRPS28-204ENST00000519120 TFPTP0C1Z6 253 aa13.91□□□□□ -0.18
MRPS28-204ENST00000519120 IMPDH2P12268 514 aa13.91□□□□□ -0.18
MRPS28-204ENST00000519120 SLC9B1Q4ZJI4 515 aa13.91□□□□□ -0.18
MRPS28-204ENST00000519120 RNF220Q5VTB9 566 aa13.91□□□□□ -0.18
MRPS28-204ENST00000519120 ATG4DQ86TL0 474 aaPredicted RBP13.91□□□□□ -0.18
MRPS28-204ENST00000519120 DTX2Q86UW9 622 aa13.91□□□□□ -0.18
MRPS28-204ENST00000519120 C1orf162Q8NEQ5 155 aaPredicted RBP13.91□□□□□ -0.18
MRPS28-204ENST00000519120 KBTBD8Q8NFY9 601 aa13.91□□□□□ -0.18
MRPS28-204ENST00000519120 GTPBP3Q969Y2 492 aaKnown RBP13.91□□□□□ -0.18
MRPS28-204ENST00000519120 MUS81Q96NY9 551 aa13.91□□□□□ -0.18
MRPS28-204ENST00000519120 AMBRA1Q9C0C7 1298 aa13.91□□□□□ -0.18
MRPS28-204ENST00000519120 TPT1P8Q9HAU6 139 aa13.91□□□□□ -0.18
MRPS28-204ENST00000519120 TMBIM4Q9HC24 238 aa13.91□□□□□ -0.18
MRPS28-204ENST00000519120 SLC6A13Q9NSD5 602 aa13.91□□□□□ -0.18
MRPS28-204ENST00000519120 FAIMQ9NVQ4 179 aa13.91□□□□□ -0.18
MRPS28-204ENST00000519120 MGAT4BQ9UQ53 548 aa13.91□□□□□ -0.18
MRPS28-204ENST00000519120 CIB4A0PJX0 185 aa13.9□□□□□ -0.18
MRPS28-204ENST00000519120 TMEM72A0PK05 275 aa13.9□□□□□ -0.18
MRPS28-204ENST00000519120 SHISA9B4DS77 424 aa13.9□□□□□ -0.18
MRPS28-204ENST00000519120 PDLIM1O00151 329 aa13.9□□□□□ -0.18
MRPS28-204ENST00000519120 UBDO15205 165 aa13.9□□□□□ -0.18
MRPS28-204ENST00000519120 RAMP1O60894 148 aa13.9□□□□□ -0.18
MRPS28-204ENST00000519120 ANP32DO95626 131 aa13.9□□□□□ -0.18
MRPS28-204ENST00000519120 ETFAP13804 333 aa13.9□□□□□ -0.18
MRPS28-204ENST00000519120 PTAFRP25105 342 aa13.9□□□□□ -0.18
MRPS28-204ENST00000519120 NTF4P34130 210 aa13.9□□□□□ -0.18
MRPS28-204ENST00000519120 IDUAP35475 653 aa13.9□□□□□ -0.18
MRPS28-204ENST00000519120 MRPL19P49406 292 aaKnown RBP13.9□□□□□ -0.18
MRPS28-204ENST00000519120 DSTNP60981 165 aa13.9□□□□□ -0.18
MRPS28-204ENST00000519120 SLC17A1Q14916 467 aa13.9□□□□□ -0.18
MRPS28-204ENST00000519120 PGGHGQ32M88 737 aa13.9□□□□□ -0.18
MRPS28-204ENST00000519120 BEND6Q5SZJ8 279 aaPredicted RBP13.9□□□□□ -0.18
MRPS28-204ENST00000519120 PRAMEF8Q5VWM4 474 aa13.9□□□□□ -0.18
MRPS28-204ENST00000519120 PRAMEF7Q5VXH5 474 aa13.9□□□□□ -0.18
MRPS28-204ENST00000519120 TMEM108Q6UXF1 575 aa13.9□□□□□ -0.18
MRPS28-204ENST00000519120 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.9□□□□□ -0.18
MRPS28-204ENST00000519120 MAVSQ7Z434 540 aa13.9□□□□□ -0.18
MRPS28-204ENST00000519120 CCDC103Q8IW40 242 aa13.9□□□□□ -0.18
MRPS28-204ENST00000519120 UBE2J2Q8N2K1 259 aa13.9□□□□□ -0.18
MRPS28-204ENST00000519120 C17orf78Q8N4C9 275 aa13.9□□□□□ -0.18
MRPS28-204ENST00000519120 OR52P1PQ8NH57 321 aa13.9□□□□□ -0.18
MRPS28-204ENST00000519120 SLC38A5Q8WUX1 472 aa13.9□□□□□ -0.18
MRPS28-204ENST00000519120 SLC35B4Q969S0 331 aa13.9□□□□□ -0.18
MRPS28-204ENST00000519120 TMEM45BQ96B21 275 aa13.9□□□□□ -0.18
MRPS28-204ENST00000519120 TRAF4Q9BUZ4 470 aaPredicted RBP13.9□□□□□ -0.18
MRPS28-204ENST00000519120 SF3B5Q9BWJ5 86 aaKnown RBP13.9□□□□□ -0.18
MRPS28-204ENST00000519120 ARMC7Q9H6L4 198 aa13.9□□□□□ -0.18
MRPS28-204ENST00000519120 CISD1Q9NZ45 108 aaKnown RBP13.9□□□□□ -0.18
MRPS28-204ENST00000519120 NPAP1Q9NZP6 1156 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms