RNA–Protein interactions for RNA: ENST00000518604.1

SQLE-202, Transcript of squalene epoxidase, humanhuman

TSL 2

Gene SQLE, Length 743 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-202ENST00000518604 ALOX5P09917 674 aa3.04□□□□□ -1.92
SQLE-202ENST00000518604 CCDC130P13994 396 aa3.04□□□□□ -1.92
SQLE-202ENST00000518604 AZU1P20160 251 aa3.04□□□□□ -1.92
SQLE-202ENST00000518604 PTMSP20962 102 aa3.04□□□□□ -1.92
SQLE-202ENST00000518604 COX7A1P24310 79 aa3.04□□□□□ -1.92
SQLE-202ENST00000518604 PRPHP41219 470 aa3.04□□□□□ -1.92
SQLE-202ENST00000518604 GRIA1P42261 906 aa3.04□□□□□ -1.92
SQLE-202ENST00000518604 KIR2DS4P43632 304 aa3.04□□□□□ -1.92
SQLE-202ENST00000518604 EFNB2P52799 333 aa3.04□□□□□ -1.92
SQLE-202ENST00000518604 BIDP55957 195 aa3.04□□□□□ -1.92
SQLE-202ENST00000518604 NUP107P57740 925 aa3.04□□□□□ -1.92
SQLE-202ENST00000518604 TNFRSF17Q02223 184 aa3.04□□□□□ -1.92
SQLE-202ENST00000518604 ARFRP1Q13795 201 aa3.04□□□□□ -1.92
SQLE-202ENST00000518604 PDK3Q15120 406 aa3.04□□□□□ -1.92
SQLE-202ENST00000518604 EXOC3L2Q2M3D2 409 aa3.04□□□□□ -1.92
SQLE-202ENST00000518604 CCDC152Q4G0S7 254 aa3.04□□□□□ -1.92
SQLE-202ENST00000518604 C1orf220Q5T0J3 134 aa3.04□□□□□ -1.92
SQLE-202ENST00000518604 SLC35F2Q8IXU6 374 aa3.04□□□□□ -1.92
SQLE-202ENST00000518604 FTMTQ8N4E7 242 aa3.04□□□□□ -1.92
SQLE-202ENST00000518604 NKAPP1Q8N9T2 125 aa3.04□□□□□ -1.92
SQLE-202ENST00000518604 CATSPER1Q8NEC5 780 aa3.04□□□□□ -1.92
SQLE-202ENST00000518604 TRPV1Q8NER1 839 aa3.04□□□□□ -1.92
SQLE-202ENST00000518604 OR51S1Q8NGJ8 323 aa3.04□□□□□ -1.92
SQLE-202ENST00000518604 BRSK1Q8TDC3 778 aa3.04□□□□□ -1.92
SQLE-202ENST00000518604 MAIP1Q8WWC4 291 aa3.04□□□□□ -1.92
SQLE-202ENST00000518604 UCN3Q969E3 161 aa3.04□□□□□ -1.92
SQLE-202ENST00000518604 COQ2Q96H96 371 aa3.04□□□□□ -1.92
SQLE-202ENST00000518604 ZSCAN5AQ9BUG6 496 aa3.04□□□□□ -1.92
SQLE-202ENST00000518604 SUDS3Q9H7L9 328 aaPredicted RBP3.04□□□□□ -1.92
SQLE-202ENST00000518604 FOLH1BQ9HBA9 442 aa3.04□□□□□ -1.92
SQLE-202ENST00000518604 PLGRKTQ9HBL7 147 aa3.04□□□□□ -1.92
SQLE-202ENST00000518604 AIG1Q9NVV5 245 aa3.04□□□□□ -1.92
SQLE-202ENST00000518604 TREM2Q9NZC2 230 aa3.04□□□□□ -1.92
SQLE-202ENST00000518604 KIF25Q9UIL4 384 aa3.04□□□□□ -1.92
SQLE-202ENST00000518604 POLDIP2Q9Y2S7 368 aa3.04□□□□□ -1.92
SQLE-202ENST00000518604 THSD7BQ9C0I4 1608 aa3.04□□□□□ -1.92
SQLE-202ENST00000518604 CROCCQ5TZA2 2017 aa3.03□□□□□ -1.92
SQLE-202ENST00000518604 IGHV1OR21-1A0A087WYE8 117 aa3.03□□□□□ -1.92
SQLE-202ENST00000518604 PINLYPA6NC86 204 aa3.03□□□□□ -1.92
SQLE-202ENST00000518604 USP27XA6NNY8 438 aa3.03□□□□□ -1.92
SQLE-202ENST00000518604 A8MUA0 341 aa3.03□□□□□ -1.92
SQLE-202ENST00000518604 DCTN6O00399 190 aa3.03□□□□□ -1.92
SQLE-202ENST00000518604 DBTP11182 482 aaKnown RBP3.03□□□□□ -1.92
SQLE-202ENST00000518604 NR2C1P13056 603 aa3.03□□□□□ -1.92
SQLE-202ENST00000518604 POU2F1P14859 743 aa3.03□□□□□ -1.92
SQLE-202ENST00000518604 HTR1EP28566 365 aa3.03□□□□□ -1.92
SQLE-202ENST00000518604 GCAP28676 217 aa3.03□□□□□ -1.92
SQLE-202ENST00000518604 CD1BP29016 333 aa3.03□□□□□ -1.92
SQLE-202ENST00000518604 PRDX3P30048 256 aaKnown RBP3.03□□□□□ -1.92
SQLE-202ENST00000518604 RPL13AP40429 203 aaKnown RBP3.03□□□□□ -1.92
SQLE-202ENST00000518604 KPNA2P52292 529 aaKnown RBP3.03□□□□□ -1.92
SQLE-202ENST00000518604 RPS14P62263 151 aaKnown RBP3.03□□□□□ -1.92
SQLE-202ENST00000518604 NSDHLQ15738 373 aa3.03□□□□□ -1.92
SQLE-202ENST00000518604 NSUN5P1Q3KNT7 163 aa3.03□□□□□ -1.92
SQLE-202ENST00000518604 ANKDD1AQ495B1 522 aa3.03□□□□□ -1.92
SQLE-202ENST00000518604 SFT2D3Q587I9 215 aa3.03□□□□□ -1.92
SQLE-202ENST00000518604 Q6ZPB1 254 aaPredicted RBP3.03□□□□□ -1.92
SQLE-202ENST00000518604 TMEM123Q8N131 208 aa3.03□□□□□ -1.92
SQLE-202ENST00000518604 OR2L13Q8N349 312 aa3.03□□□□□ -1.92
SQLE-202ENST00000518604 ARL6IP6Q8N6S5 226 aa3.03□□□□□ -1.92
SQLE-202ENST00000518604 DCAF4L2Q8NA75 395 aa3.03□□□□□ -1.92
SQLE-202ENST00000518604 OR52M1Q8NGK5 317 aa3.03□□□□□ -1.92
SQLE-202ENST00000518604 NEIL3Q8TAT5 605 aa3.03□□□□□ -1.92
SQLE-202ENST00000518604 RNF138Q8WVD3 245 aa3.03□□□□□ -1.92
SQLE-202ENST00000518604 PAGE5Q96GU1 130 aa3.03□□□□□ -1.92
SQLE-202ENST00000518604 TBX15Q96SF7 602 aa3.03□□□□□ -1.92
SQLE-202ENST00000518604 SLC25A22Q9H936 323 aa3.03□□□□□ -1.92
SQLE-202ENST00000518604 SMOXQ9NWM0 555 aa3.03□□□□□ -1.92
SQLE-202ENST00000518604 NEUROG3Q9Y4Z2 214 aa3.03□□□□□ -1.92
SQLE-202ENST00000518604 TIMM10BQ9Y5J6 103 aa3.03□□□□□ -1.92
SQLE-202ENST00000518604 V9GY05 133 aa3.03□□□□□ -1.92
SQLE-202ENST00000518604 COL16A1Q07092 1604 aaPredicted RBP3.03□□□□□ -1.92
SQLE-202ENST00000518604 RAI1Q7Z5J4 1906 aaPredicted RBP3.03□□□□□ -1.92
SQLE-202ENST00000518604 RPAP1Q9BWH6 1393 aaPredicted RBP3.02□□□□□ -1.93
SQLE-202ENST00000518604 HIP1O00291 1037 aa3.02□□□□□ -1.93
SQLE-202ENST00000518604 PRKAB2O43741 272 aa3.02□□□□□ -1.93
SQLE-202ENST00000518604 UGT1A9O60656 530 aa3.02□□□□□ -1.93
SQLE-202ENST00000518604 SNNO75324 88 aaPredicted RBP3.02□□□□□ -1.93
SQLE-202ENST00000518604 GLRA2P23416 452 aa3.02□□□□□ -1.93
SQLE-202ENST00000518604 CAV2P51636 162 aa3.02□□□□□ -1.93
SQLE-202ENST00000518604 CRYBB1P53674 252 aaPredicted RBP3.02□□□□□ -1.93
SQLE-202ENST00000518604 NCBP1Q09161 790 aaKnown RBP3.02□□□□□ -1.93
SQLE-202ENST00000518604 PARP15Q460N3 678 aa3.02□□□□□ -1.93
SQLE-202ENST00000518604 VSTM4Q8IW00 320 aa3.02□□□□□ -1.93
SQLE-202ENST00000518604 ZNF740Q8NDX6 193 aa3.02□□□□□ -1.93
SQLE-202ENST00000518604 OR10G3Q8NGC4 313 aa3.02□□□□□ -1.93
SQLE-202ENST00000518604 DCUN1D4Q92564 292 aa3.02□□□□□ -1.93
SQLE-202ENST00000518604 UBE2E3Q969T4 207 aa3.02□□□□□ -1.93
SQLE-202ENST00000518604 NRTNQ99748 197 aa3.02□□□□□ -1.93
SQLE-202ENST00000518604 NRIP2Q9BQI9 281 aa3.02□□□□□ -1.93
SQLE-202ENST00000518604 PARD6BQ9BYG5 372 aa3.02□□□□□ -1.93
SQLE-202ENST00000518604 REEP4Q9H6H4 257 aa3.02□□□□□ -1.93
SQLE-202ENST00000518604 RPL36Q9Y3U8 105 aaKnown RBP3.02□□□□□ -1.93
SQLE-202ENST00000518604 MEGF6O75095 1541 aa3.02□□□□□ -1.93
SQLE-202ENST00000518604 TRAV26-1A0A087WT03 109 aa3.01□□□□□ -1.93
SQLE-202ENST00000518604 PCP4L1A6NKN8 68 aa3.01□□□□□ -1.93
SQLE-202ENST00000518604 GPR89AB7ZAQ6 455 aa3.01□□□□□ -1.93
SQLE-202ENST00000518604 GFYI3L273 518 aa3.01□□□□□ -1.93
SQLE-202ENST00000518604 POLR2DO15514 142 aaKnown RBP3.01□□□□□ -1.93
SQLE-202ENST00000518604 ZNF861PO60384 105 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms