RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 GALNT11Q8NCW6 608 aa10.08□□□□□ -0.8
PCDHGA1-202ENST00000517417 SLC22A8Q8TCC7 542 aa10.08□□□□□ -0.8
PCDHGA1-202ENST00000517417 PDXPQ96GD0 296 aa10.08□□□□□ -0.8
PCDHGA1-202ENST00000517417 WDFY2Q96P53 400 aa10.08□□□□□ -0.8
PCDHGA1-202ENST00000517417 LYSMD1Q96S90 227 aa10.08□□□□□ -0.8
PCDHGA1-202ENST00000517417 PRR14Q9BWN1 585 aa10.08□□□□□ -0.8
PCDHGA1-202ENST00000517417 RALGAPA2Q2PPJ7 1873 aa10.08□□□□□ -0.8
PCDHGA1-202ENST00000517417 DCDC2BA2VCK2 349 aa10.08□□□□□ -0.8
PCDHGA1-202ENST00000517417 ARRDC5A6NEK1 342 aa10.08□□□□□ -0.8
PCDHGA1-202ENST00000517417 HBQ1P09105 142 aa10.08□□□□□ -0.8
PCDHGA1-202ENST00000517417 FABP5Q01469 135 aa10.08□□□□□ -0.8
PCDHGA1-202ENST00000517417 SRYQ05066 204 aa10.08□□□□□ -0.8
PCDHGA1-202ENST00000517417 OR5J2Q8NH18 312 aa10.08□□□□□ -0.8
PCDHGA1-202ENST00000517417 THRSPQ92748 146 aa10.08□□□□□ -0.8
PCDHGA1-202ENST00000517417 MNTQ99583 582 aa10.08□□□□□ -0.8
PCDHGA1-202ENST00000517417 BARHL1Q9BZE3 327 aa10.08□□□□□ -0.8
PCDHGA1-202ENST00000517417 NEUROG3Q9Y4Z2 214 aa10.08□□□□□ -0.8
PCDHGA1-202ENST00000517417 HTTP42858 3142 aa10.07□□□□□ -0.8
PCDHGA1-202ENST00000517417 ZNF43P17038 809 aa10.07□□□□□ -0.8
PCDHGA1-202ENST00000517417 CXCL12P48061 93 aa10.07□□□□□ -0.8
PCDHGA1-202ENST00000517417 ZNF84P51523 738 aa10.07□□□□□ -0.8
PCDHGA1-202ENST00000517417 SNU13P55769 128 aaKnown RBP10.07□□□□□ -0.8
PCDHGA1-202ENST00000517417 RPS15P62841 145 aaKnown RBP10.07□□□□□ -0.8
PCDHGA1-202ENST00000517417 VAMP2P63027 116 aa10.07□□□□□ -0.8
PCDHGA1-202ENST00000517417 P2RY14Q15391 338 aa10.07□□□□□ -0.8
PCDHGA1-202ENST00000517417 CDNFQ49AH0 187 aa10.07□□□□□ -0.8
PCDHGA1-202ENST00000517417 PRAMEF8Q5VWM4 474 aa10.07□□□□□ -0.8
PCDHGA1-202ENST00000517417 PRAMEF7Q5VXH5 474 aa10.07□□□□□ -0.8
PCDHGA1-202ENST00000517417 SERPINA12Q8IW75 414 aa10.07□□□□□ -0.8
PCDHGA1-202ENST00000517417 TCTE3Q8IZS6 198 aa10.07□□□□□ -0.8
PCDHGA1-202ENST00000517417 OR6T1Q8NGN1 323 aa10.07□□□□□ -0.8
PCDHGA1-202ENST00000517417 COQ8AQ8NI60 647 aa10.07□□□□□ -0.8
PCDHGA1-202ENST00000517417 TMEM43Q9BTV4 400 aa10.07□□□□□ -0.8
PCDHGA1-202ENST00000517417 GLTPQ9NZD2 209 aa10.07□□□□□ -0.8
PCDHGA1-202ENST00000517417 A0A0G2JMP0 313 aa10.07□□□□□ -0.8
PCDHGA1-202ENST00000517417 PRRT4C9JH25 899 aa10.07□□□□□ -0.8
PCDHGA1-202ENST00000517417 HOXD11P31277 338 aaPredicted RBP10.07□□□□□ -0.8
PCDHGA1-202ENST00000517417 GXYLT1Q4G148 440 aa10.07□□□□□ -0.8
PCDHGA1-202ENST00000517417 CCSAPQ6IQ19 270 aaPredicted RBP10.07□□□□□ -0.8
PCDHGA1-202ENST00000517417 ZNF565Q8N9K5 539 aa10.07□□□□□ -0.8
PCDHGA1-202ENST00000517417 OR4M2Q8NGB6 313 aa10.07□□□□□ -0.8
PCDHGA1-202ENST00000517417 OR5W2Q8NH69 310 aa10.07□□□□□ -0.8
PCDHGA1-202ENST00000517417 SCGB3A2Q96PL1 93 aa10.07□□□□□ -0.8
PCDHGA1-202ENST00000517417 SYNPO2LQ9H987 977 aa10.07□□□□□ -0.8
PCDHGA1-202ENST00000517417 ACSS1Q9NUB1 689 aaPredicted RBP10.07□□□□□ -0.8
PCDHGA1-202ENST00000517417 MGAT4CQ9UBM8 478 aa10.07□□□□□ -0.8
PCDHGA1-202ENST00000517417 TMEM129A0AVI4 362 aa10.07□□□□□ -0.8
PCDHGA1-202ENST00000517417 DISC1C4P0D8 188 aa10.07□□□□□ -0.8
PCDHGA1-202ENST00000517417 MTRF1O75570 445 aaKnown RBP10.07□□□□□ -0.8
PCDHGA1-202ENST00000517417 UCHL1P09936 223 aa10.07□□□□□ -0.8
PCDHGA1-202ENST00000517417 EVI2BP34910 448 aa10.07□□□□□ -0.8
PCDHGA1-202ENST00000517417 TIGD3Q6B0B8 471 aa10.07□□□□□ -0.8
PCDHGA1-202ENST00000517417 PLPP6Q8IY26 295 aa10.07□□□□□ -0.8
PCDHGA1-202ENST00000517417 ADAMTS18Q8TE60 1221 aa10.07□□□□□ -0.8
PCDHGA1-202ENST00000517417 SLC25A44Q96H78 314 aaPredicted RBP10.07□□□□□ -0.8
PCDHGA1-202ENST00000517417 RBM24Q9BX46 236 aaKnown RBP10.07□□□□□ -0.8
PCDHGA1-202ENST00000517417 OR10A4Q9H209 315 aa10.07□□□□□ -0.8
PCDHGA1-202ENST00000517417 FKBP14Q9NWM8 211 aa10.07□□□□□ -0.8
PCDHGA1-202ENST00000517417 HPF1Q9NWY4 346 aa10.07□□□□□ -0.8
PCDHGA1-202ENST00000517417 COPZ2Q9P299 210 aa10.07□□□□□ -0.8
PCDHGA1-202ENST00000517417 PRAMEF4O60810 478 aa10.06□□□□□ -0.8
PCDHGA1-202ENST00000517417 SYNGR4O95473 234 aa10.06□□□□□ -0.8
PCDHGA1-202ENST00000517417 SEMG1P04279 462 aa10.06□□□□□ -0.8
PCDHGA1-202ENST00000517417 SOX18P35713 384 aa10.06□□□□□ -0.8
PCDHGA1-202ENST00000517417 GLP1RP43220 463 aa10.06□□□□□ -0.8
PCDHGA1-202ENST00000517417 CBFBQ13951 182 aa10.06□□□□□ -0.8
PCDHGA1-202ENST00000517417 PGGHGQ32M88 737 aa10.06□□□□□ -0.8
PCDHGA1-202ENST00000517417 PRAMEF9Q5VWM5 478 aa10.06□□□□□ -0.8
PCDHGA1-202ENST00000517417 FAM83HQ6ZRV2 1179 aaPredicted RBP10.06□□□□□ -0.8
PCDHGA1-202ENST00000517417 CAMKMTQ7Z624 323 aa10.06□□□□□ -0.8
PCDHGA1-202ENST00000517417 OR13C3Q8NGS6 347 aa10.06□□□□□ -0.8
PCDHGA1-202ENST00000517417 C14orf166Q9Y224 244 aaKnown RBP10.06□□□□□ -0.8
PCDHGA1-202ENST00000517417 TRAV18A0A075B6X5 111 aa10.06□□□□□ -0.8
PCDHGA1-202ENST00000517417 CIB4A0PJX0 185 aa10.06□□□□□ -0.8
PCDHGA1-202ENST00000517417 TEX46H3BTG2 121 aa10.06□□□□□ -0.8
PCDHGA1-202ENST00000517417 TSPAN31Q12999 210 aa10.06□□□□□ -0.8
PCDHGA1-202ENST00000517417 ZNF79Q15937 498 aa10.06□□□□□ -0.8
PCDHGA1-202ENST00000517417 MRPL2Q5T653 305 aaKnown RBP10.06□□□□□ -0.8
PCDHGA1-202ENST00000517417 SLC18B1Q6NT16 456 aa10.06□□□□□ -0.8
PCDHGA1-202ENST00000517417 TMEM64Q6YI46 380 aa10.06□□□□□ -0.8
PCDHGA1-202ENST00000517417 OR5AK2Q8NH90 309 aa10.06□□□□□ -0.8
PCDHGA1-202ENST00000517417 NPRL2Q8WTW4 380 aa10.06□□□□□ -0.8
PCDHGA1-202ENST00000517417 COQ10AQ96MF6 247 aa10.06□□□□□ -0.8
PCDHGA1-202ENST00000517417 ACTR6Q9GZN1 396 aa10.06□□□□□ -0.8
PCDHGA1-202ENST00000517417 MBNL1Q9NR56 388 aaKnown RBP10.06□□□□□ -0.8
PCDHGA1-202ENST00000517417 ATG4BQ9Y4P1 393 aa10.06□□□□□ -0.8
PCDHGA1-202ENST00000517417 H0Y8X5 98 aa10.06□□□□□ -0.8
PCDHGA1-202ENST00000517417 MT-ND4P03905 459 aa10.06□□□□□ -0.8
PCDHGA1-202ENST00000517417 P04436 131 aa10.06□□□□□ -0.8
PCDHGA1-202ENST00000517417 TNFRSF4P43489 277 aa10.06□□□□□ -0.8
PCDHGA1-202ENST00000517417 ART1P52961 327 aa10.06□□□□□ -0.8
PCDHGA1-202ENST00000517417 CLDN20P56880 219 aa10.06□□□□□ -0.8
PCDHGA1-202ENST00000517417 ACY1Q03154 408 aa10.06□□□□□ -0.8
PCDHGA1-202ENST00000517417 GPR176Q14439 515 aa10.06□□□□□ -0.8
PCDHGA1-202ENST00000517417 LHX8Q68G74 356 aa10.06□□□□□ -0.8
PCDHGA1-202ENST00000517417 PARM1Q6UWI2 310 aa10.06□□□□□ -0.8
PCDHGA1-202ENST00000517417 LYPD4Q6UWN0 246 aa10.06□□□□□ -0.8
PCDHGA1-202ENST00000517417 CHRDL2Q6WN34 429 aa10.06□□□□□ -0.8
PCDHGA1-202ENST00000517417 ZNF611Q8N823 705 aa10.06□□□□□ -0.8
PCDHGA1-202ENST00000517417 GALNT6Q8NCL4 622 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms