RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 TRIM49P0CI25 452 aa3.42□□□□□ -1.86
RNU4-60P-201ENST00000517239 TRIM49CP0CI26 452 aa3.42□□□□□ -1.86
RNU4-60P-201ENST00000517239 MLNP12872 115 aa3.42□□□□□ -1.86
RNU4-60P-201ENST00000517239 MGMTP16455 207 aa3.42□□□□□ -1.86
RNU4-60P-201ENST00000517239 JUNBP17275 347 aaPredicted RBP3.42□□□□□ -1.86
RNU4-60P-201ENST00000517239 MAGP20916 626 aa3.42□□□□□ -1.86
RNU4-60P-201ENST00000517239 BGNP21810 368 aa3.42□□□□□ -1.86
RNU4-60P-201ENST00000517239 FASP25445 335 aa3.42□□□□□ -1.86
RNU4-60P-201ENST00000517239 TEAD1P28347 426 aa3.42□□□□□ -1.86
RNU4-60P-201ENST00000517239 PDHA2P29803 388 aa3.42□□□□□ -1.86
RNU4-60P-201ENST00000517239 PCK1P35558 622 aa3.42□□□□□ -1.86
RNU4-60P-201ENST00000517239 MAP2K2P36507 400 aa3.42□□□□□ -1.86
RNU4-60P-201ENST00000517239 RPL4P36578 427 aaKnown RBP3.42□□□□□ -1.86
RNU4-60P-201ENST00000517239 ACVR1BP36896 505 aa3.42□□□□□ -1.86
RNU4-60P-201ENST00000517239 CSKP41240 450 aa3.42□□□□□ -1.86
RNU4-60P-201ENST00000517239 MAGEA6P43360 314 aa3.42□□□□□ -1.86
RNU4-60P-201ENST00000517239 GDI2P50395 445 aaKnown RBP3.42□□□□□ -1.86
RNU4-60P-201ENST00000517239 EMP2P54851 167 aa3.42□□□□□ -1.86
RNU4-60P-201ENST00000517239 ATP6V0D1P61421 351 aa3.42□□□□□ -1.86
RNU4-60P-201ENST00000517239 HERV-K104P61576 105 aa3.42□□□□□ -1.86
RNU4-60P-201ENST00000517239 ADARB1P78563 741 aaKnown RBP3.42□□□□□ -1.86
RNU4-60P-201ENST00000517239 MRPS22P82650 360 aaKnown RBP3.42□□□□□ -1.86
RNU4-60P-201ENST00000517239 CHRNB3Q05901 458 aa3.42□□□□□ -1.86
RNU4-60P-201ENST00000517239 RBBP4Q09028 425 aa3.42□□□□□ -1.86
RNU4-60P-201ENST00000517239 EFEMP1Q12805 493 aa3.42□□□□□ -1.86
RNU4-60P-201ENST00000517239 GRB7Q14451 532 aa3.42□□□□□ -1.86
RNU4-60P-201ENST00000517239 TRAM2Q15035 370 aa3.42□□□□□ -1.86
RNU4-60P-201ENST00000517239 UAP1Q16222 522 aaPredicted RBP3.42□□□□□ -1.86
RNU4-60P-201ENST00000517239 CALCRLQ16602 461 aa3.42□□□□□ -1.86
RNU4-60P-201ENST00000517239 KCTD19Q17RG1 926 aaPredicted RBP3.42□□□□□ -1.86
RNU4-60P-201ENST00000517239 RGS21Q2M5E4 152 aa3.42□□□□□ -1.86
RNU4-60P-201ENST00000517239 TRIM16LQ309B1 348 aa3.42□□□□□ -1.86
RNU4-60P-201ENST00000517239 SMUG1Q53HV7 270 aa3.42□□□□□ -1.86
RNU4-60P-201ENST00000517239 COQ5Q5HYK3 327 aa3.42□□□□□ -1.86
RNU4-60P-201ENST00000517239 UTF1Q5T230 341 aa3.42□□□□□ -1.86
RNU4-60P-201ENST00000517239 IRAK1BP1Q5VVH5 260 aa3.42□□□□□ -1.86
RNU4-60P-201ENST00000517239 KHDRBS2Q5VWX1 349 aaKnown RBP3.42□□□□□ -1.86
RNU4-60P-201ENST00000517239 PRR5LQ6MZQ0 368 aa3.42□□□□□ -1.86
RNU4-60P-201ENST00000517239 RFWD3Q6PCD5 774 aa3.42□□□□□ -1.86
RNU4-60P-201ENST00000517239 RHBDF2Q6PJF5 856 aa3.42□□□□□ -1.86
RNU4-60P-201ENST00000517239 Q6YL49 198 aa3.42□□□□□ -1.86
RNU4-60P-201ENST00000517239 TMPRSS11AQ6ZMR5 421 aa3.42□□□□□ -1.86
RNU4-60P-201ENST00000517239 SETD3Q86TU7 594 aaPredicted RBP3.42□□□□□ -1.86
RNU4-60P-201ENST00000517239 APRG1Q8IVJ8 170 aa3.42□□□□□ -1.86
RNU4-60P-201ENST00000517239 FUNDC1Q8IVP5 155 aa3.42□□□□□ -1.86
RNU4-60P-201ENST00000517239 DND1Q8IYX4 353 aaKnown RBP3.42□□□□□ -1.86
RNU4-60P-201ENST00000517239 METTL4Q8N3J2 472 aa3.42□□□□□ -1.86
RNU4-60P-201ENST00000517239 TMEM199Q8N511 208 aa3.42□□□□□ -1.86
RNU4-60P-201ENST00000517239 TPRX1Q8N7U7 411 aa3.42□□□□□ -1.86
RNU4-60P-201ENST00000517239 TTLQ8NG68 377 aa3.42□□□□□ -1.86
RNU4-60P-201ENST00000517239 OR2AP1Q8NGE2 309 aa3.42□□□□□ -1.86
RNU4-60P-201ENST00000517239 STMN2Q93045 179 aa3.42□□□□□ -1.86
RNU4-60P-201ENST00000517239 NEIL2Q969S2 332 aa3.42□□□□□ -1.86
RNU4-60P-201ENST00000517239 OMA1Q96E52 524 aa3.42□□□□□ -1.86
RNU4-60P-201ENST00000517239 ZBED6CLQ96FA7 236 aaPredicted RBP3.42□□□□□ -1.86
RNU4-60P-201ENST00000517239 SCMH1Q96GD3 660 aa3.42□□□□□ -1.86
RNU4-60P-201ENST00000517239 SELENOSQ9BQE4 189 aa3.42□□□□□ -1.86
RNU4-60P-201ENST00000517239 UTP23Q9BRU9 249 aaKnown RBP3.42□□□□□ -1.86
RNU4-60P-201ENST00000517239 NEUROG2Q9H2A3 272 aa3.42□□□□□ -1.86
RNU4-60P-201ENST00000517239 C1orf198Q9H425 327 aa3.42□□□□□ -1.86
RNU4-60P-201ENST00000517239 FNDC4Q9H6D8 234 aaPredicted RBP3.42□□□□□ -1.86
RNU4-60P-201ENST00000517239 NTN4Q9HB63 628 aa3.42□□□□□ -1.86
RNU4-60P-201ENST00000517239 MRM3Q9HC36 420 aaKnown RBP3.42□□□□□ -1.86
RNU4-60P-201ENST00000517239 RETNQ9HD89 108 aa3.42□□□□□ -1.86
RNU4-60P-201ENST00000517239 NECAP2Q9NVZ3 263 aa3.42□□□□□ -1.86
RNU4-60P-201ENST00000517239 SLC39A1Q9NY26 324 aa3.42□□□□□ -1.86
RNU4-60P-201ENST00000517239 EIF3KQ9UBQ5 218 aaKnown RBP3.42□□□□□ -1.86
RNU4-60P-201ENST00000517239 RALYQ9UKM9 306 aaKnown RBP3.42□□□□□ -1.86
RNU4-60P-201ENST00000517239 SCML2Q9UQR0 700 aa3.42□□□□□ -1.86
RNU4-60P-201ENST00000517239 SLC17A4Q9Y2C5 497 aa3.42□□□□□ -1.86
RNU4-60P-201ENST00000517239 PLB1Q6P1J6 1458 aa3.41□□□□□ -1.86
RNU4-60P-201ENST00000517239 CFAP65Q6ZU64 1925 aaKnown RBP3.41□□□□□ -1.86
RNU4-60P-201ENST00000517239 TRBV9A0A0B4J1U6 114 aa3.41□□□□□ -1.86
RNU4-60P-201ENST00000517239 hCG_38984A0A1B0GV85 526 aa3.41□□□□□ -1.86
RNU4-60P-201ENST00000517239 A0A1W2PPI3 338 aa3.41□□□□□ -1.86
RNU4-60P-201ENST00000517239 LINC01553A4QN01 128 aa3.41□□□□□ -1.86
RNU4-60P-201ENST00000517239 CLEC18AA5D8T8 446 aa3.41□□□□□ -1.86
RNU4-60P-201ENST00000517239 H3BN98 237 aa3.41□□□□□ -1.86
RNU4-60P-201ENST00000517239 MKRN2OSH3BPM6 223 aa3.41□□□□□ -1.86
RNU4-60P-201ENST00000517239 KLRC4-KLRK1H3BQV0 150 aa3.41□□□□□ -1.86
RNU4-60P-201ENST00000517239 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.41□□□□□ -1.86
RNU4-60P-201ENST00000517239 GPR171O14626 319 aa3.41□□□□□ -1.86
RNU4-60P-201ENST00000517239 TM9SF1O15321 606 aa3.41□□□□□ -1.86
RNU4-60P-201ENST00000517239 TOX3O15405 576 aaPredicted RBP3.41□□□□□ -1.86
RNU4-60P-201ENST00000517239 AQP9O43315 295 aa3.41□□□□□ -1.86
RNU4-60P-201ENST00000517239 RGS14O43566 566 aa3.41□□□□□ -1.86
RNU4-60P-201ENST00000517239 PCDH7O60245 1069 aa3.41□□□□□ -1.86
RNU4-60P-201ENST00000517239 ZMPSTE24O75844 475 aa3.41□□□□□ -1.86
RNU4-60P-201ENST00000517239 TNFAIP8O95379 198 aa3.41□□□□□ -1.86
RNU4-60P-201ENST00000517239 OXSR1O95747 527 aaPredicted RBP3.41□□□□□ -1.86
RNU4-60P-201ENST00000517239 PEX11BO96011 259 aa3.41□□□□□ -1.86
RNU4-60P-201ENST00000517239 ATP1A1P05023 1023 aaKnown RBP3.41□□□□□ -1.86
RNU4-60P-201ENST00000517239 LINC00271P0C7V0 271 aa3.41□□□□□ -1.86
RNU4-60P-201ENST00000517239 BCKDHAP12694 445 aa3.41□□□□□ -1.86
RNU4-60P-201ENST00000517239 GATA1P15976 413 aaPredicted RBP3.41□□□□□ -1.86
RNU4-60P-201ENST00000517239 WT1P19544 449 aaPredicted RBP3.41□□□□□ -1.86
RNU4-60P-201ENST00000517239 CNR1P21554 472 aa3.41□□□□□ -1.86
RNU4-60P-201ENST00000517239 IDSP22304 550 aa3.41□□□□□ -1.86
RNU4-60P-201ENST00000517239 UGT1A3P35503 534 aa3.41□□□□□ -1.86
RNU4-60P-201ENST00000517239 CEACAM3P40198 252 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms