RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 TLK2Q86UE8 772 aa-2.21□□□□□ -2.76
RNU6-539P-201ENST00000516665 THNSL1Q8IYQ7 743 aa-2.21□□□□□ -2.76
RNU6-539P-201ENST00000516665 TAGAPQ8N103 731 aa-2.21□□□□□ -2.76
RNU6-539P-201ENST00000516665 WDTC1Q8N5D0 677 aa-2.21□□□□□ -2.76
RNU6-539P-201ENST00000516665 PDILTQ8N807 584 aa-2.21□□□□□ -2.76
RNU6-539P-201ENST00000516665 SLC4A11Q8NBS3 891 aa-2.21□□□□□ -2.76
RNU6-539P-201ENST00000516665 B3GNT7Q8NFL0 401 aa-2.21□□□□□ -2.76
RNU6-539P-201ENST00000516665 COQ8AQ8NI60 647 aa-2.21□□□□□ -2.76
RNU6-539P-201ENST00000516665 SETD6Q8TBK2 473 aa-2.21□□□□□ -2.76
RNU6-539P-201ENST00000516665 C15orf40Q8WUR7 153 aa-2.21□□□□□ -2.76
RNU6-539P-201ENST00000516665 ZNF606Q8WXB4 792 aa-2.21□□□□□ -2.76
RNU6-539P-201ENST00000516665 ZNF830Q96NB3 372 aaPredicted RBP-2.21□□□□□ -2.76
RNU6-539P-201ENST00000516665 MCHR1Q99705 422 aa-2.21□□□□□ -2.76
RNU6-539P-201ENST00000516665 FERMT1Q9BQL6 677 aa-2.21□□□□□ -2.76
RNU6-539P-201ENST00000516665 TBCDQ9BTW9 1192 aa-2.21□□□□□ -2.76
RNU6-539P-201ENST00000516665 THUMPD3Q9BV44 507 aaKnown RBP-2.21□□□□□ -2.76
RNU6-539P-201ENST00000516665 MRPL37Q9BZE1 423 aaKnown RBP-2.21□□□□□ -2.76
RNU6-539P-201ENST00000516665 PAIP1Q9H074 479 aaKnown RBP-2.21□□□□□ -2.76
RNU6-539P-201ENST00000516665 DEFB127Q9H1M4 99 aa-2.21□□□□□ -2.76
RNU6-539P-201ENST00000516665 ANKZF1Q9H8Y5 726 aa-2.21□□□□□ -2.76
RNU6-539P-201ENST00000516665 PSD3Q9NYI0 1048 aa-2.21□□□□□ -2.76
RNU6-539P-201ENST00000516665 DDX19BQ9UMR2 479 aa-2.21□□□□□ -2.76
RNU6-539P-201ENST00000516665 GPR34Q9UPC5 381 aa-2.21□□□□□ -2.76
RNU6-539P-201ENST00000516665 NOP58Q9Y2X3 529 aaKnown RBP-2.21□□□□□ -2.76
RNU6-539P-201ENST00000516665 VWA8A3KMH1 1905 aa-2.21□□□□□ -2.76
RNU6-539P-201ENST00000516665 SPATA31E1Q6ZUB1 1445 aa-2.22□□□□□ -2.76
RNU6-539P-201ENST00000516665 A0A0B4J203 849 aa-2.22□□□□□ -2.76
RNU6-539P-201ENST00000516665 A0A1W2PPH5 198 aa-2.22□□□□□ -2.76
RNU6-539P-201ENST00000516665 A0A1W2PPW3 197 aa-2.22□□□□□ -2.76
RNU6-539P-201ENST00000516665 GRIFINA4D1Z8 144 aa-2.22□□□□□ -2.76
RNU6-539P-201ENST00000516665 G3V3Q6 166 aa-2.22□□□□□ -2.76
RNU6-539P-201ENST00000516665 RASGRF2O14827 1237 aa-2.22□□□□□ -2.76
RNU6-539P-201ENST00000516665 EIF5BO60841 1220 aaKnown RBP-2.22□□□□□ -2.76
RNU6-539P-201ENST00000516665 YIF1AO95070 293 aa-2.22□□□□□ -2.76
RNU6-539P-201ENST00000516665 BGLAPP02818 100 aa-2.22□□□□□ -2.76
RNU6-539P-201ENST00000516665 BCHEP06276 602 aa-2.22□□□□□ -2.76
RNU6-539P-201ENST00000516665 SLC35G4P0C7Q5 338 aa-2.22□□□□□ -2.76
RNU6-539P-201ENST00000516665 CNTFP26441 200 aa-2.22□□□□□ -2.76
RNU6-539P-201ENST00000516665 EPS15P42566 896 aa-2.22□□□□□ -2.76
RNU6-539P-201ENST00000516665 OR3A1P47881 315 aa-2.22□□□□□ -2.76
RNU6-539P-201ENST00000516665 STK19P49842 368 aaPredicted RBP-2.22□□□□□ -2.76
RNU6-539P-201ENST00000516665 NPY4RP50391 375 aa-2.22□□□□□ -2.76
RNU6-539P-201ENST00000516665 CDH4P55283 916 aa-2.22□□□□□ -2.76
RNU6-539P-201ENST00000516665 FKBP1BP68106 108 aa-2.22□□□□□ -2.76
RNU6-539P-201ENST00000516665 DDX10Q13206 875 aaKnown RBP-2.22□□□□□ -2.76
RNU6-539P-201ENST00000516665 PICALMQ13492 652 aa-2.22□□□□□ -2.76
RNU6-539P-201ENST00000516665 KLF5Q13887 457 aaPredicted RBP-2.22□□□□□ -2.76
RNU6-539P-201ENST00000516665 EIF2B1Q14232 305 aaKnown RBP-2.22□□□□□ -2.76
RNU6-539P-201ENST00000516665 IRF3Q14653 427 aa-2.22□□□□□ -2.76
RNU6-539P-201ENST00000516665 CST6Q15828 149 aa-2.22□□□□□ -2.76
RNU6-539P-201ENST00000516665 SGCAQ16586 387 aa-2.22□□□□□ -2.76
RNU6-539P-201ENST00000516665 SNRNP48Q6IEG0 339 aaKnown RBP-2.22□□□□□ -2.76
RNU6-539P-201ENST00000516665 NRARPQ7Z6K4 114 aa-2.22□□□□□ -2.76
RNU6-539P-201ENST00000516665 KBTBD6Q86V97 674 aa-2.22□□□□□ -2.76
RNU6-539P-201ENST00000516665 MINDY1Q8N5J2 469 aa-2.22□□□□□ -2.76
RNU6-539P-201ENST00000516665 OR4K13Q8NH42 304 aa-2.22□□□□□ -2.76
RNU6-539P-201ENST00000516665 OR9G1Q8NH87 305 aa-2.22□□□□□ -2.76
RNU6-539P-201ENST00000516665 COG3Q96JB2 828 aa-2.22□□□□□ -2.76
RNU6-539P-201ENST00000516665 PGLYRP4Q96LB8 373 aa-2.22□□□□□ -2.76
RNU6-539P-201ENST00000516665 SSX3Q99909 188 aa-2.22□□□□□ -2.76
RNU6-539P-201ENST00000516665 PRRT1Q99946 306 aa-2.22□□□□□ -2.76
RNU6-539P-201ENST00000516665 DESI2Q9BSY9 194 aa-2.22□□□□□ -2.76
RNU6-539P-201ENST00000516665 CNOT10Q9H9A5 744 aaKnown RBP-2.22□□□□□ -2.76
RNU6-539P-201ENST00000516665 PAK1IP1Q9NWT1 392 aaPredicted RBP-2.22□□□□□ -2.76
RNU6-539P-201ENST00000516665 LUZP4Q9P127 313 aa-2.22□□□□□ -2.76
RNU6-539P-201ENST00000516665 CLCF1Q9UBD9 225 aa-2.22□□□□□ -2.76
RNU6-539P-201ENST00000516665 TCEAL9Q9UHQ7 104 aa-2.22□□□□□ -2.76
RNU6-539P-201ENST00000516665 CCL26Q9Y258 94 aa-2.22□□□□□ -2.76
RNU6-539P-201ENST00000516665 MRPS2Q9Y399 296 aaKnown RBP-2.22□□□□□ -2.76
RNU6-539P-201ENST00000516665 PCDHGB3Q9Y5G1 929 aa-2.22□□□□□ -2.76
RNU6-539P-201ENST00000516665 TSSC4Q9Y5U2 329 aaPredicted RBP-2.22□□□□□ -2.76
RNU6-539P-201ENST00000516665 KIAA1671Q9BY89 1806 aa-2.23□□□□□ -2.77
RNU6-539P-201ENST00000516665 KNCNA6PVL3 124 aa-2.23□□□□□ -2.77
RNU6-539P-201ENST00000516665 F5H423 210 aaPredicted RBP-2.23□□□□□ -2.77
RNU6-539P-201ENST00000516665 F5H6K3 240 aa-2.23□□□□□ -2.77
RNU6-539P-201ENST00000516665 IPO8O15397 1037 aaKnown RBP-2.23□□□□□ -2.77
RNU6-539P-201ENST00000516665 BCAS1O75363 584 aaPredicted RBP-2.23□□□□□ -2.77
RNU6-539P-201ENST00000516665 IGFBP1P08833 259 aaPredicted RBP-2.23□□□□□ -2.77
RNU6-539P-201ENST00000516665 RPL4P36578 427 aaKnown RBP-2.23□□□□□ -2.77
RNU6-539P-201ENST00000516665 CEACAM6P40199 344 aa-2.23□□□□□ -2.77
RNU6-539P-201ENST00000516665 CSNK1A1P48729 337 aa-2.23□□□□□ -2.77
RNU6-539P-201ENST00000516665 RGS7P49802 495 aa-2.23□□□□□ -2.77
RNU6-539P-201ENST00000516665 DLX1P56177 255 aa-2.23□□□□□ -2.77
RNU6-539P-201ENST00000516665 RPS4XP62701 263 aaKnown RBP-2.23□□□□□ -2.77
RNU6-539P-201ENST00000516665 KLRC3Q07444 240 aa-2.23□□□□□ -2.77
RNU6-539P-201ENST00000516665 TFDP1Q14186 410 aa-2.23□□□□□ -2.77
RNU6-539P-201ENST00000516665 CHRNA6Q15825 494 aa-2.23□□□□□ -2.77
RNU6-539P-201ENST00000516665 TWISTNBQ3B726 338 aaPredicted RBP-2.23□□□□□ -2.77
RNU6-539P-201ENST00000516665 ZNF791Q3KP31 576 aaPredicted RBP-2.23□□□□□ -2.77
RNU6-539P-201ENST00000516665 HES5Q5TA89 166 aa-2.23□□□□□ -2.77
RNU6-539P-201ENST00000516665 C6orf163Q5TEZ5 329 aa-2.23□□□□□ -2.77
RNU6-539P-201ENST00000516665 MED27Q6P2C8 311 aa-2.23□□□□□ -2.77
RNU6-539P-201ENST00000516665 TMEM205Q6UW68 189 aa-2.23□□□□□ -2.77
RNU6-539P-201ENST00000516665 Q6ZRU5 148 aa-2.23□□□□□ -2.77
RNU6-539P-201ENST00000516665 MYLK4Q86YV6 388 aaPredicted RBP-2.23□□□□□ -2.77
RNU6-539P-201ENST00000516665 PYROXD2Q8N2H3 581 aa-2.23□□□□□ -2.77
RNU6-539P-201ENST00000516665 FAM19A2Q8N3H0 131 aa-2.23□□□□□ -2.77
RNU6-539P-201ENST00000516665 RNF10Q8N5U6 811 aaKnown RBP-2.23□□□□□ -2.77
RNU6-539P-201ENST00000516665 OR51G2Q8NGK0 314 aa-2.23□□□□□ -2.77
RNU6-539P-201ENST00000516665 TM4SF18Q96CE8 201 aa-2.23□□□□□ -2.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms